CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 67  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0807
VAL 2830.0807
GLY 2840.0572
ASN 2850.0144
THR 2860.0160
VAL 2870.0146
LEU 2880.0095
HIS 2890.0088
ALA 2900.0098
LEU 2910.0078
VAL 2920.0076
GLU 2930.0091
VAL 2940.0107
ALA 2950.0083
ASP 2960.0057
ASN 2970.0135
THR 2980.0331
VAL 2990.0453
ASP 3000.0169
ASN 3010.0091
THR 3020.0241
LYS 3030.0309
PHE 3040.0302
VAL 3050.0223
THR 3060.0241
SER 3070.0283
MET 3080.0202
TYR 3090.0112
ASN 3100.0169
GLU 3110.0083
ILE 3120.0095
LEU 3130.0185
ILE 3140.0269
LEU 3150.0311
GLY 3160.0338
ALA 3170.0186
LYS 3180.0171
LEU 3190.0379
HIS 3200.0537
PRO 3210.0250
THR 3220.0267
LEU 3230.0224
LYS 3240.0217
LEU 3250.0234
GLU 3260.0217
GLU 3270.0236
ILE 3280.0138
THR 3290.0093
ASN 3300.0109
ARG 3310.0196
LYS 3320.0217
GLY 3330.0243
LEU 3340.0086
THR 3350.0072
PRO 3360.0071
LEU 3370.0069
ALA 3380.0091
LEU 3390.0095
ALA 3400.0111
ALA 3410.0118
SER 3420.0134
SER 3430.0141
GLY 3440.0141
LYS 3450.0114
ILE 3460.0094
GLY 3470.0094
VAL 3480.0095
LEU 3490.0063
ALA 3500.0067
TYR 3510.0103
ILE 3520.0064
LEU 3530.0060
GLN 3540.0086
ARG 3550.0150
GLU 3560.0169
ILE 3570.0141
HIS 3580.0384
GLU 3590.0136
PRO 3600.0240
GLU 3610.0295
CYS 3620.0147
ARG 3630.0201
HIS 3640.0183
LEU 3650.0139
SER 3660.0161
ARG 3670.0082
LYS 3680.0114
PHE 3690.0156
THR 3700.0132
GLU 3710.0175
TRP 3720.0184
ALA 3730.0260
TYR 3740.0214
GLY 3750.0255
PRO 3760.0125
VAL 3770.0070
HIS 3780.0143
SER 3790.0146
SER 3800.0118
LEU 3810.0117
TYR 3820.0062
ASP 3830.0051
LEU 3840.0063
SER 3850.0094
CYS 3860.0109
ILE 3870.0087
ASP 3880.0087
THR 3890.0112
CYS 3900.0150
GLU 3910.0289
LYS 3920.0194
ASN 3930.0087
SER 3940.0070
VAL 3950.0083
LEU 3960.0070
GLU 3970.0067
VAL 3980.0076
ILE 3990.0110
ALA 4000.0106
TYR 4010.0112
SER 4020.0150
SER 4030.0269
SER 4040.0189
GLU 4050.0339
THR 4060.0180
PRO 4070.0156
ASN 4080.0138
ARG 4090.0150
HIS 4100.0132
ASP 4110.0126
MET 4120.0096
LEU 4130.0076
LEU 4140.0077
VAL 4150.0042
GLU 4160.0025
PRO 4170.0028
LEU 4180.0039
ASN 4190.0039
ARG 4200.0018
LEU 4210.0023
LEU 4220.0026
GLN 4230.0045
ASP 4240.0048
LYS 4250.0051
TRP 4260.0062
ASP 4270.0066
ARG 4280.0070
PHE 4290.0069
VAL 4300.0083
LYS 4310.0082
ARG 4320.0084
ILE 4330.0128
PHE 4340.0110
TYR 4350.0086
PHE 4360.0219
ASN 4370.0222
PHE 4380.0140
PHE 4390.0200
VAL 4400.0218
TYR 4410.0122
CYS 4420.0101
LEU 4430.0121
TYR 4440.0050
MET 4450.0038
ILE 4460.0101
ILE 4470.0094
PHE 4480.0073
THR 4490.0064
ALA 4500.0080
ALA 4510.0127
ALA 4520.0099
TYR 4530.0096
TYR 4540.0064
ARG 4550.0045
PRO 4560.0070
VAL 4570.0112
GLU 4580.0089
GLY 4590.0081
LEU 4600.0215
PRO 4610.0176
PRO 4620.0254
TYR 4630.0038
LYS 4640.0102
LEU 4650.0104
LYS 4660.0130
ASN 4670.0103
THR 4680.0190
VAL 4690.0186
GLY 4700.0235
ASP 4710.0181
TYR 4720.0115
PHE 4730.0148
ARG 4740.0160
VAL 4750.0152
THR 4760.0159
GLY 4770.0136
GLU 4780.0091
ILE 4790.0140
LEU 4800.0109
SER 4810.0067
VAL 4820.0088
SER 4830.0055
GLY 4840.0056
GLY 4850.0067
VAL 4860.0058
TYR 4870.0081
PHE 4880.0074
PHE 4890.0071
PHE 4900.0083
ARG 4910.0074
GLY 4920.0076
ILE 4930.0088
GLN 4940.0084
TYR 4950.0055
PHE 4960.0053
LEU 4970.0073
GLN 4980.0085
ARG 4990.0056
ARG 5000.0048
PRO 5010.0080
SER 5020.0114
LEU 5030.0178
LYS 5040.0158
SER 5050.0167
LEU 5060.0152
PHE 5070.0181
VAL 5080.0207
ASP 5090.0160
SER 5100.0105
TYR 5110.0074
SER 5120.0035
GLU 5130.0018
ILE 5140.0053
LEU 5150.0064
PHE 5160.0066
PHE 5170.0073
VAL 5180.0073
GLN 5190.0060
SER 5200.0040
LEU 5210.0045
PHE 5220.0058
MET 5230.0057
LEU 5240.0049
VAL 5250.0061
SER 5260.0111
VAL 5270.0126
VAL 5280.0097
LEU 5290.0099
TYR 5300.0140
PHE 5310.0213
SER 5320.0172
GLN 5330.0263
ARG 5340.0200
LYS 5350.0124
GLU 5360.0112
TYR 5370.0094
VAL 5380.0112
ALA 5390.0087
SER 5400.0071
MET 5410.0088
VAL 5420.0135
PHE 5430.0116
SER 5440.0061
LEU 5450.0064
ALA 5460.0086
MET 5470.0068
GLY 5480.0031
TRP 5490.0028
THR 5500.0058
ASN 5510.0073
MET 5520.0058
LEU 5530.0101
TYR 5540.0086
TYR 5550.0083
THR 5560.0098
ARG 5570.0047
GLY 5580.0089
PHE 5590.0146
GLN 5600.0188
GLN 5610.0272
MET 5620.0250
GLY 5630.0107
ILE 5640.0080
TYR 5650.0175
ALA 5660.0126
VAL 5670.0113
MET 5680.0123
ILE 5690.0157
GLU 5700.0170
LYS 5710.0137
MET 5720.0140
ILE 5730.0116
LEU 5740.0058
ARG 5750.0048
ASP 5760.0034
LEU 5770.0224
CYS 5780.0297
ARG 5790.0202
PHE 5800.0053
MET 5810.0194
PHE 5820.0237
VAL 5830.0045
TYR 5840.0052
LEU 5850.0081
VAL 5860.0047
PHE 5870.0058
LEU 5880.0065
PHE 5890.0058
GLY 5900.0071
PHE 5910.0055
SER 5920.0017
THR 5930.0025
ALA 5940.0040
VAL 5950.0042
VAL 5960.0054
THR 5970.0062
LEU 5980.0098
ILE 5990.0045
GLU 6000.0042
ASP 6010.0137
SER 6260.0153
TYR 6270.0097
ASN 6280.0112
SER 6290.0069
LEU 6300.0074
TYR 6310.0070
SER 6320.0029
THR 6330.0024
CYS 6340.0059
LEU 6350.0097
GLU 6360.0073
LEU 6370.0032
PHE 6380.0110
LYS 6390.0139
PHE 6400.0087
THR 6410.0095
ILE 6420.0204
GLY 6430.0200
MET 6440.0262
GLY 6450.0154
ASP 6460.0199
LEU 6470.0109
GLU 6480.0055
PHE 6490.0033
THR 6500.0103
GLU 6510.0166
ASN 6520.0107
TYR 6530.0086
ASP 6540.0208
PHE 6550.0259
LYS 6560.0143
ALA 6570.0080
VAL 6580.0093
PHE 6590.0037
ILE 6600.0077
ILE 6610.0104
LEU 6620.0090
LEU 6630.0088
LEU 6640.0127
ALA 6650.0122
TYR 6660.0080
VAL 6670.0054
ILE 6680.0120
LEU 6690.0153
THR 6700.0130
TYR 6710.0086
ILE 6720.0121
LEU 6730.0195
LEU 6740.0183
LEU 6750.0210
ASN 6760.0234
MET 6770.0105
LEU 6780.0097
ILE 6790.0128
ALA 6800.0082
LEU 6810.0176
MET 6820.0218
GLY 6830.0158
GLU 6840.0321
THR 6850.0423
VAL 6860.0276
ASN 6870.0183
LYS 6880.0279
ILE 6890.0200
ALA 6900.0179
GLN 6910.0179
GLU 6920.0208
SER 6930.0158
LYS 6940.0148
ASN 6950.0164
ILE 6960.0155
TRP 6970.0108
LYS 6980.0117
LEU 6990.0130
GLN 7000.0098
ARG 7010.0076
ALA 7020.0087
ILE 7030.0082
THR 7040.0056
ILE 7050.0049
LEU 7060.0046
ASP 7070.0047
THR 7080.0045
GLU 7090.0033
LYS 7100.0030
SER 7110.0036
PHE 7120.0043
LEU 7130.0073
LYS 7140.0097
CYS 7150.0105
MET 7160.0052
ARG 7170.0060
LYS 7180.0088
ALA 7190.0019
PHE 7200.0015
ARG 7210.0017
SER 7220.0048
GLY 7230.0054
LYS 7240.0108
LEU 7250.0084
LEU 7260.0228
TYR 7380.0028
ARG 7390.0014
TRP 7400.0027
CYS 7410.0063
PHE 7420.0088
ARG 7430.0097
VAL 7440.0102
ASP 7450.0120
GLU 7460.0095

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.