CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 69  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0998
VAL 2830.0503
GLY 2840.0396
ASN 2850.0172
THR 2860.0086
VAL 2870.0083
LEU 2880.0075
HIS 2890.0054
ALA 2900.0057
LEU 2910.0085
VAL 2920.0065
GLU 2930.0087
VAL 2940.0142
ALA 2950.0177
ASP 2960.0240
ASN 2970.0218
THR 2980.0239
VAL 2990.0310
ASP 3000.0241
ASN 3010.0178
THR 3020.0241
LYS 3030.0232
PHE 3040.0177
VAL 3050.0171
THR 3060.0147
SER 3070.0152
MET 3080.0144
TYR 3090.0084
ASN 3100.0087
GLU 3110.0115
ILE 3120.0122
LEU 3130.0120
ILE 3140.0118
LEU 3150.0121
GLY 3160.0099
ALA 3170.0077
LYS 3180.0106
LEU 3190.0101
HIS 3200.0109
PRO 3210.0089
THR 3220.0101
LEU 3230.0110
LYS 3240.0128
LEU 3250.0128
GLU 3260.0155
GLU 3270.0175
ILE 3280.0140
THR 3290.0103
ASN 3300.0098
ARG 3310.0187
LYS 3320.0145
GLY 3330.0156
LEU 3340.0040
THR 3350.0073
PRO 3360.0081
LEU 3370.0096
ALA 3380.0075
LEU 3390.0059
ALA 3400.0136
ALA 3410.0110
SER 3420.0110
SER 3430.0156
GLY 3440.0177
LYS 3450.0180
ILE 3460.0167
GLY 3470.0169
VAL 3480.0120
LEU 3490.0094
ALA 3500.0104
TYR 3510.0093
ILE 3520.0076
LEU 3530.0067
GLN 3540.0063
ARG 3550.0052
GLU 3560.0047
ILE 3570.0065
HIS 3580.0030
GLU 3590.0036
PRO 3600.0049
GLU 3610.0034
CYS 3620.0051
ARG 3630.0052
HIS 3640.0070
LEU 3650.0087
SER 3660.0071
ARG 3670.0048
LYS 3680.0026
PHE 3690.0025
THR 3700.0133
GLU 3710.0118
TRP 3720.0118
ALA 3730.0179
TYR 3740.0188
GLY 3750.0265
PRO 3760.0241
VAL 3770.0175
HIS 3780.0172
SER 3790.0133
SER 3800.0106
LEU 3810.0094
TYR 3820.0021
ASP 3830.0033
LEU 3840.0065
SER 3850.0093
CYS 3860.0114
ILE 3870.0119
ASP 3880.0148
THR 3890.0136
CYS 3900.0142
GLU 3910.0172
LYS 3920.0153
ASN 3930.0107
SER 3940.0132
VAL 3950.0131
LEU 3960.0132
GLU 3970.0119
VAL 3980.0119
ILE 3990.0121
ALA 4000.0147
TYR 4010.0156
SER 4020.0154
SER 4030.0273
SER 4040.0222
GLU 4050.0258
THR 4060.0217
PRO 4070.0229
ASN 4080.0184
ARG 4090.0126
HIS 4100.0104
ASP 4110.0132
MET 4120.0088
LEU 4130.0083
LEU 4140.0087
VAL 4150.0059
GLU 4160.0054
PRO 4170.0058
LEU 4180.0102
ASN 4190.0112
ARG 4200.0080
LEU 4210.0146
LEU 4220.0200
GLN 4230.0243
ASP 4240.0254
LYS 4250.0184
TRP 4260.0248
ASP 4270.0327
ARG 4280.0267
PHE 4290.0189
VAL 4300.0135
LYS 4310.0324
ARG 4320.0314
ILE 4330.0101
PHE 4340.0100
TYR 4350.0157
PHE 4360.0161
ASN 4370.0121
PHE 4380.0081
PHE 4390.0130
VAL 4400.0142
TYR 4410.0088
CYS 4420.0073
LEU 4430.0070
TYR 4440.0087
MET 4450.0094
ILE 4460.0103
ILE 4470.0104
PHE 4480.0101
THR 4490.0094
ALA 4500.0085
ALA 4510.0058
ALA 4520.0056
TYR 4530.0087
TYR 4540.0080
ARG 4550.0078
PRO 4560.0089
VAL 4570.0124
GLU 4580.0122
GLY 4590.0124
LEU 4600.0097
PRO 4610.0068
PRO 4620.0076
TYR 4630.0093
LYS 4640.0138
LEU 4650.0138
LYS 4660.0179
ASN 4670.0216
THR 4680.0119
VAL 4690.0131
GLY 4700.0134
ASP 4710.0097
TYR 4720.0125
PHE 4730.0143
ARG 4740.0110
VAL 4750.0054
THR 4760.0024
GLY 4770.0053
GLU 4780.0035
ILE 4790.0036
LEU 4800.0077
SER 4810.0075
VAL 4820.0046
SER 4830.0087
GLY 4840.0110
GLY 4850.0063
VAL 4860.0093
TYR 4870.0132
PHE 4880.0058
PHE 4890.0074
PHE 4900.0116
ARG 4910.0051
GLY 4920.0065
ILE 4930.0106
GLN 4940.0079
TYR 4950.0143
PHE 4960.0216
LEU 4970.0292
GLN 4980.0338
ARG 4990.0314
ARG 5000.0305
PRO 5010.0268
SER 5020.0998
LEU 5030.0686
LYS 5040.0438
SER 5050.0317
LEU 5060.0221
PHE 5070.0327
VAL 5080.0283
ASP 5090.0234
SER 5100.0214
TYR 5110.0098
SER 5120.0063
GLU 5130.0062
ILE 5140.0096
LEU 5150.0070
PHE 5160.0049
PHE 5170.0057
VAL 5180.0066
GLN 5190.0044
SER 5200.0015
LEU 5210.0046
PHE 5220.0045
MET 5230.0035
LEU 5240.0015
VAL 5250.0031
SER 5260.0056
VAL 5270.0075
VAL 5280.0101
LEU 5290.0080
TYR 5300.0042
PHE 5310.0091
SER 5320.0128
GLN 5330.0024
ARG 5340.0088
LYS 5350.0069
GLU 5360.0097
TYR 5370.0050
VAL 5380.0050
ALA 5390.0047
SER 5400.0067
MET 5410.0089
VAL 5420.0135
PHE 5430.0128
SER 5440.0098
LEU 5450.0118
ALA 5460.0134
MET 5470.0106
GLY 5480.0099
TRP 5490.0104
THR 5500.0098
ASN 5510.0093
MET 5520.0064
LEU 5530.0130
TYR 5540.0135
TYR 5550.0114
THR 5560.0164
ARG 5570.0155
GLY 5580.0176
PHE 5590.0192
GLN 5600.0200
GLN 5610.0184
MET 5620.0162
GLY 5630.0125
ILE 5640.0110
TYR 5650.0104
ALA 5660.0093
VAL 5670.0080
MET 5680.0089
ILE 5690.0101
GLU 5700.0127
LYS 5710.0146
MET 5720.0168
ILE 5730.0162
LEU 5740.0134
ARG 5750.0146
ASP 5760.0165
LEU 5770.0128
CYS 5780.0039
ARG 5790.0075
PHE 5800.0047
MET 5810.0062
PHE 5820.0047
VAL 5830.0042
TYR 5840.0043
LEU 5850.0056
VAL 5860.0051
PHE 5870.0029
LEU 5880.0031
PHE 5890.0040
GLY 5900.0037
PHE 5910.0022
SER 5920.0023
THR 5930.0027
ALA 5940.0024
VAL 5950.0019
VAL 5960.0016
THR 5970.0017
LEU 5980.0009
ILE 5990.0026
GLU 6000.0038
ASP 6010.0071
SER 6260.0027
TYR 6270.0024
ASN 6280.0021
SER 6290.0023
LEU 6300.0026
TYR 6310.0039
SER 6320.0027
THR 6330.0022
CYS 6340.0022
LEU 6350.0026
GLU 6360.0024
LEU 6370.0015
PHE 6380.0016
LYS 6390.0022
PHE 6400.0027
THR 6410.0031
ILE 6420.0024
GLY 6430.0059
MET 6440.0074
GLY 6450.0038
ASP 6460.0028
LEU 6470.0021
GLU 6480.0023
PHE 6490.0016
THR 6500.0043
GLU 6510.0053
ASN 6520.0048
TYR 6530.0031
ASP 6540.0020
PHE 6550.0018
LYS 6560.0035
ALA 6570.0041
VAL 6580.0026
PHE 6590.0012
ILE 6600.0023
ILE 6610.0025
LEU 6620.0012
LEU 6630.0015
LEU 6640.0026
ALA 6650.0037
TYR 6660.0023
VAL 6670.0047
ILE 6680.0075
LEU 6690.0060
THR 6700.0059
TYR 6710.0080
ILE 6720.0107
LEU 6730.0115
LEU 6740.0085
LEU 6750.0091
ASN 6760.0111
MET 6770.0124
LEU 6780.0118
ILE 6790.0115
ALA 6800.0162
LEU 6810.0209
MET 6820.0214
GLY 6830.0216
GLU 6840.0391
THR 6850.0407
VAL 6860.0274
ASN 6870.0262
LYS 6880.0288
ILE 6890.0232
ALA 6900.0245
GLN 6910.0232
GLU 6920.0171
SER 6930.0141
LYS 6940.0193
ASN 6950.0109
ILE 6960.0112
TRP 6970.0161
LYS 6980.0184
LEU 6990.0175
GLN 7000.0210
ARG 7010.0240
ALA 7020.0236
ILE 7030.0234
THR 7040.0233
ILE 7050.0191
LEU 7060.0195
ASP 7070.0188
THR 7080.0110
GLU 7090.0120
LYS 7100.0172
SER 7110.0162
PHE 7120.0142
LEU 7130.0140
LYS 7140.0170
CYS 7150.0285
MET 7160.0074
ARG 7170.0076
LYS 7180.0144
ALA 7190.0109
PHE 7200.0091
ARG 7210.0131
SER 7220.0143
GLY 7230.0139
LYS 7240.0182
LEU 7250.0200
LEU 7260.0329
TYR 7380.0160
ARG 7390.0146
TRP 7400.0123
CYS 7410.0083
PHE 7420.0087
ARG 7430.0097
VAL 7440.0128
ASP 7450.0154
GLU 7460.0161

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.