CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 260127153226105187

---  normal mode 84  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0532
VAL 2830.0354
GLY 2840.0215
ASN 2850.0093
THR 2860.0201
VAL 2870.0201
LEU 2880.0159
HIS 2890.0058
ALA 2900.0077
LEU 2910.0074
VAL 2920.0070
GLU 2930.0104
VAL 2940.0150
ALA 2950.0191
ASP 2960.0174
ASN 2970.0151
THR 2980.0144
VAL 2990.0151
ASP 3000.0342
ASN 3010.0257
THR 3020.0205
LYS 3030.0227
PHE 3040.0188
VAL 3050.0192
THR 3060.0171
SER 3070.0115
MET 3080.0094
TYR 3090.0094
ASN 3100.0105
GLU 3110.0107
ILE 3120.0132
LEU 3130.0143
ILE 3140.0160
LEU 3150.0137
GLY 3160.0116
ALA 3170.0096
LYS 3180.0209
LEU 3190.0179
HIS 3200.0143
PRO 3210.0147
THR 3220.0193
LEU 3230.0153
LYS 3240.0223
LEU 3250.0212
GLU 3260.0217
GLU 3270.0216
ILE 3280.0256
THR 3290.0185
ASN 3300.0104
ARG 3310.0173
LYS 3320.0174
GLY 3330.0296
LEU 3340.0125
THR 3350.0113
PRO 3360.0072
LEU 3370.0021
ALA 3380.0033
LEU 3390.0032
ALA 3400.0059
ALA 3410.0079
SER 3420.0072
SER 3430.0097
GLY 3440.0115
LYS 3450.0122
ILE 3460.0140
GLY 3470.0143
VAL 3480.0144
LEU 3490.0120
ALA 3500.0117
TYR 3510.0117
ILE 3520.0103
LEU 3530.0104
GLN 3540.0118
ARG 3550.0077
GLU 3560.0099
ILE 3570.0144
HIS 3580.0044
GLU 3590.0094
PRO 3600.0031
GLU 3610.0018
CYS 3620.0093
ARG 3630.0111
HIS 3640.0109
LEU 3650.0132
SER 3660.0119
ARG 3670.0057
LYS 3680.0050
PHE 3690.0063
THR 3700.0034
GLU 3710.0102
TRP 3720.0095
ALA 3730.0066
TYR 3740.0079
GLY 3750.0068
PRO 3760.0182
VAL 3770.0099
HIS 3780.0060
SER 3790.0084
SER 3800.0060
LEU 3810.0041
TYR 3820.0066
ASP 3830.0058
LEU 3840.0069
SER 3850.0081
CYS 3860.0067
ILE 3870.0067
ASP 3880.0079
THR 3890.0090
CYS 3900.0103
GLU 3910.0272
LYS 3920.0080
ASN 3930.0111
SER 3940.0054
VAL 3950.0051
LEU 3960.0064
GLU 3970.0072
VAL 3980.0055
ILE 3990.0084
ALA 4000.0132
TYR 4010.0102
SER 4020.0110
SER 4030.0210
SER 4040.0116
GLU 4050.0163
THR 4060.0119
PRO 4070.0094
ASN 4080.0113
ARG 4090.0161
HIS 4100.0165
ASP 4110.0144
MET 4120.0115
LEU 4130.0124
LEU 4140.0129
VAL 4150.0132
GLU 4160.0130
PRO 4170.0106
LEU 4180.0088
ASN 4190.0089
ARG 4200.0083
LEU 4210.0045
LEU 4220.0035
GLN 4230.0049
ASP 4240.0029
LYS 4250.0020
TRP 4260.0033
ASP 4270.0024
ARG 4280.0028
PHE 4290.0026
VAL 4300.0020
LYS 4310.0070
ARG 4320.0100
ILE 4330.0059
PHE 4340.0016
TYR 4350.0061
PHE 4360.0135
ASN 4370.0094
PHE 4380.0053
PHE 4390.0120
VAL 4400.0103
TYR 4410.0053
CYS 4420.0037
LEU 4430.0048
TYR 4440.0041
MET 4450.0039
ILE 4460.0055
ILE 4470.0060
PHE 4480.0048
THR 4490.0071
ALA 4500.0077
ALA 4510.0074
ALA 4520.0058
TYR 4530.0122
TYR 4540.0082
ARG 4550.0070
PRO 4560.0103
VAL 4570.0078
GLU 4580.0049
GLY 4590.0114
LEU 4600.0153
PRO 4610.0069
PRO 4620.0184
TYR 4630.0040
LYS 4640.0036
LEU 4650.0027
LYS 4660.0062
ASN 4670.0067
THR 4680.0039
VAL 4690.0059
GLY 4700.0077
ASP 4710.0038
TYR 4720.0039
PHE 4730.0062
ARG 4740.0049
VAL 4750.0035
THR 4760.0035
GLY 4770.0046
GLU 4780.0056
ILE 4790.0090
LEU 4800.0098
SER 4810.0055
VAL 4820.0111
SER 4830.0142
GLY 4840.0146
GLY 4850.0153
VAL 4860.0186
TYR 4870.0189
PHE 4880.0140
PHE 4890.0156
PHE 4900.0118
ARG 4910.0119
GLY 4920.0079
ILE 4930.0071
GLN 4940.0147
TYR 4950.0091
PHE 4960.0167
LEU 4970.0301
GLN 4980.0295
ARG 4990.0095
ARG 5000.0245
PRO 5010.0280
SER 5020.0532
LEU 5030.0177
LYS 5040.0383
SER 5050.0238
LEU 5060.0220
PHE 5070.0226
VAL 5080.0096
ASP 5090.0111
SER 5100.0139
TYR 5110.0096
SER 5120.0066
GLU 5130.0063
ILE 5140.0059
LEU 5150.0078
PHE 5160.0063
PHE 5170.0123
VAL 5180.0126
GLN 5190.0116
SER 5200.0139
LEU 5210.0177
PHE 5220.0114
MET 5230.0077
LEU 5240.0085
VAL 5250.0065
SER 5260.0114
VAL 5270.0117
VAL 5280.0131
LEU 5290.0142
TYR 5300.0137
PHE 5310.0129
SER 5320.0122
GLN 5330.0100
ARG 5340.0182
LYS 5350.0107
GLU 5360.0179
TYR 5370.0178
VAL 5380.0191
ALA 5390.0182
SER 5400.0102
MET 5410.0075
VAL 5420.0163
PHE 5430.0157
SER 5440.0052
LEU 5450.0038
ALA 5460.0062
MET 5470.0059
GLY 5480.0044
TRP 5490.0035
THR 5500.0038
ASN 5510.0041
MET 5520.0042
LEU 5530.0042
TYR 5540.0027
TYR 5550.0050
THR 5560.0085
ARG 5570.0030
GLY 5580.0081
PHE 5590.0141
GLN 5600.0153
GLN 5610.0332
MET 5620.0291
GLY 5630.0148
ILE 5640.0165
TYR 5650.0298
ALA 5660.0144
VAL 5670.0110
MET 5680.0146
ILE 5690.0110
GLU 5700.0047
LYS 5710.0039
MET 5720.0118
ILE 5730.0171
LEU 5740.0156
ARG 5750.0147
ASP 5760.0167
LEU 5770.0202
CYS 5780.0170
ARG 5790.0119
PHE 5800.0105
MET 5810.0074
PHE 5820.0091
VAL 5830.0055
TYR 5840.0108
LEU 5850.0132
VAL 5860.0059
PHE 5870.0066
LEU 5880.0073
PHE 5890.0042
GLY 5900.0045
PHE 5910.0048
SER 5920.0049
THR 5930.0073
ALA 5940.0144
VAL 5950.0148
VAL 5960.0172
THR 5970.0190
LEU 5980.0200
ILE 5990.0198
GLU 6000.0258
ASP 6010.0521
SER 6260.0270
TYR 6270.0236
ASN 6280.0278
SER 6290.0142
LEU 6300.0287
TYR 6310.0367
SER 6320.0195
THR 6330.0110
CYS 6340.0116
LEU 6350.0229
GLU 6360.0183
LEU 6370.0043
PHE 6380.0167
LYS 6390.0089
PHE 6400.0115
THR 6410.0323
ILE 6420.0468
GLY 6430.0477
MET 6440.0064
GLY 6450.0146
ASP 6460.0350
LEU 6470.0233
GLU 6480.0196
PHE 6490.0215
THR 6500.0183
GLU 6510.0150
ASN 6520.0231
TYR 6530.0169
ASP 6540.0194
PHE 6550.0338
LYS 6560.0148
ALA 6570.0218
VAL 6580.0248
PHE 6590.0119
ILE 6600.0160
ILE 6610.0211
LEU 6620.0129
LEU 6630.0135
LEU 6640.0146
ALA 6650.0043
TYR 6660.0063
VAL 6670.0089
ILE 6680.0186
LEU 6690.0132
THR 6700.0159
TYR 6710.0250
ILE 6720.0243
LEU 6730.0185
LEU 6740.0197
LEU 6750.0132
ASN 6760.0175
MET 6770.0302
LEU 6780.0128
ILE 6790.0275
ALA 6800.0224
LEU 6810.0089
MET 6820.0199
GLY 6830.0142
GLU 6840.0099
THR 6850.0259
VAL 6860.0179
ASN 6870.0166
LYS 6880.0231
ILE 6890.0115
ALA 6900.0152
GLN 6910.0150
GLU 6920.0155
SER 6930.0146
LYS 6940.0142
ASN 6950.0153
ILE 6960.0159
TRP 6970.0099
LYS 6980.0133
LEU 6990.0153
GLN 7000.0117
ARG 7010.0081
ALA 7020.0093
ILE 7030.0090
THR 7040.0055
ILE 7050.0054
LEU 7060.0055
ASP 7070.0046
THR 7080.0046
GLU 7090.0047
LYS 7100.0065
SER 7110.0038
PHE 7120.0031
LEU 7130.0041
LYS 7140.0067
CYS 7150.0066
MET 7160.0028
ARG 7170.0043
LYS 7180.0086
ALA 7190.0043
PHE 7200.0023
ARG 7210.0031
SER 7220.0129
GLY 7230.0102
LYS 7240.0101
LEU 7250.0124
LEU 7260.0147
TYR 7380.0098
ARG 7390.0103
TRP 7400.0084
CYS 7410.0060
PHE 7420.0091
ARG 7430.0094
VAL 7440.0123
ASP 7450.0113
GLU 7460.0125

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.