CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN BINDING 10-JUN-10 3NFL  ***

<R2> analysis for 2602021513101103345

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0838
HIS 5120.0169
ASP 5130.0337
ASN 5140.0500
LEU 5150.0163
VAL 5160.0241
LEU 5170.0233
ILE 5180.0144
ARG 5190.0095
MET 5200.0088
LYS 5210.0094
PRO 5220.0106
ASP 5230.0094
GLU 5240.0582
ASN 5250.0838
GLY 5260.0581
ARG 5270.0337
PHE 5280.0058
GLY 5290.0158
PHE 5300.0126
ASN 5310.0132
VAL 5320.0095
LYS 5330.0069
GLY 5340.0118
GLY 5350.0110
TYR 5360.0086
ASP 5370.0113
GLN 5380.0170
LYS 5390.0151
MET 5400.0171
MET 5400.0171
PRO 5410.0143
VAL 5420.0175
ILE 5430.0197
VAL 5440.0159
SER 5450.0073
ARG 5460.0037
VAL 5470.0088
ALA 5480.0133
PRO 5490.0145
GLY 5500.0061
THR 5510.0066
PRO 5520.0049
ALA 5530.0052
ASP 5540.0086
LEU 5550.0116
CYS 5560.0100
VAL 5570.0234
PRO 5580.0110
ARG 5590.0086
LEU 5600.0168
ASN 5610.0181
GLU 5620.0160
GLY 5630.0232
ASP 5640.0299
GLN 5650.0234
VAL 5660.0196
VAL 5670.0181
LEU 5680.0200
ILE 5690.0152
ASN 5700.0089
GLY 5710.0171
ARG 5720.0152
ASP 5730.0209
ILE 5740.0163
ALA 5750.0150
GLU 5760.0108
HIS 5770.0084
THR 5780.0075
HIS 5790.0053
ASP 5800.0075
GLN 5810.0091
VAL 5820.0063
VAL 5830.0138
LEU 5840.0159
PHE 5850.0137
ILE 5860.0155
LYS 5870.0229
ALA 5880.0255
SER 5890.0303
CYS 5900.0261
GLU 5910.0240
ARG 5920.0231
HIS 5930.0210
SER 5940.0396
GLY 5950.0297
GLU 5960.0104
LEU 5970.0104
MET 5980.0128
LEU 5990.0156
LEU 6000.0275
VAL 6010.0213
ARG 6020.0099
PRO 6030.0319
HIS 5120.0000
ASP 5130.0000
ASN 5140.0000
LEU 5150.0000
VAL 5160.0000
LEU 5170.0000
ILE 5180.0000
ARG 5190.0000
MET 5200.0000
LYS 5210.0000
PRO 5220.0000
ASP 5230.0000
GLU 5240.0000
ASN 5250.0000
GLY 5260.0000
ARG 5270.0000
PHE 5280.0000
GLY 5290.0000
PHE 5300.0000
ASN 5310.0000
VAL 5320.0000
LYS 5330.0000
GLY 5340.0000
GLY 5350.0000
TYR 5360.0000
ASP 5370.0000
GLN 5380.0000
LYS 5390.0000
MET 5400.0000
PRO 5410.0000
VAL 5420.0000
ILE 5430.0000
VAL 5440.0000
SER 5450.0000
ARG 5460.0000
VAL 5470.0000
ALA 5480.0000
PRO 5490.0000
GLY 5500.0000
THR 5510.0000
PRO 5520.0000
ALA 5530.0000
ASP 5540.0000
LEU 5550.0000
CYS 5560.0000
VAL 5570.0000
PRO 5580.0000
ARG 5590.0000
LEU 5600.0000
ASN 5610.0000
GLU 5620.0000
GLY 5630.0000
ASP 5640.0000
GLN 5650.0000
VAL 5660.0000
VAL 5670.0000
LEU 5680.0000
ILE 5690.0000
ASN 5700.0000
GLY 5710.0000
ARG 5720.0000
ARG 5720.0000
ASP 5730.0000
ILE 5740.0000
ALA 5750.0000
GLU 5760.0000
HIS 5770.0000
THR 5780.0000
HIS 5790.0000
ASP 5800.0000
GLN 5810.0000
VAL 5820.0000
VAL 5830.0000
LEU 5840.0000
PHE 5850.0000
ILE 5860.0000
LYS 5870.0000
ALA 5880.0000
SER 5890.0000
CYS 5900.0000
SER 5940.0000
GLY 5950.0000
GLU 5960.0000
LEU 5970.0000
MET 5980.0000
LEU 5990.0000
LEU 6000.0000
VAL 6010.0000
ARG 6020.0000
PRO 6030.0000
PRO 5110.0000
HIS 5120.0000
ASP 5130.0000
ASN 5140.0000
LEU 5150.0000
VAL 5160.0000
LEU 5170.0000
ILE 5180.0000
ARG 5190.0000
MET 5200.0000
LYS 5210.0000
PRO 5220.0000
ASP 5230.0000
GLU 5240.0000
ASN 5250.0000
GLY 5260.0000
ARG 5270.0000
PHE 5280.0000
GLY 5290.0000
PHE 5300.0000
ASN 5310.0000
VAL 5320.0000
LYS 5330.0000
GLY 5340.0000
GLY 5350.0000
TYR 5360.0000
ASP 5370.0000
GLN 5380.0000
LYS 5390.0000
MET 5400.0000
PRO 5410.0000
VAL 5420.0000
ILE 5430.0000
VAL 5440.0000
SER 5450.0000
ARG 5460.0000
VAL 5470.0000
ALA 5480.0000
PRO 5490.0000
GLY 5500.0000
THR 5510.0000
PRO 5520.0000
ALA 5530.0000
ASP 5540.0000
LEU 5550.0000
CYS 5560.0000
VAL 5570.0000
PRO 5580.0000
ARG 5590.0000
LEU 5600.0000
ASN 5610.0000
GLU 5620.0000
GLY 5630.0000
ASP 5640.0000
GLN 5650.0000
VAL 5660.0000
VAL 5670.0000
LEU 5680.0000
ILE 5690.0000
ASN 5700.0000
GLY 5710.0000
ARG 5720.0000
ASP 5730.0000
ILE 5740.0000
ALA 5750.0000
GLU 5760.0000
HIS 5770.0000
THR 5780.0000
HIS 5790.0000
ASP 5800.0000
GLN 5810.0000
VAL 5820.0000
VAL 5830.0000
LEU 5840.0000
PHE 5850.0000
ILE 5860.0000
LYS 5870.0000
ALA 5880.0000
SER 5890.0000
CYS 5900.0000
GLU 5960.0000
LEU 5970.0000
MET 5980.0000
MET 5980.0000
LEU 5990.0000
LEU 6000.0000
VAL 6010.0000
ARG 6020.0000
PRO 6030.0000
ASN 6040.0000
ASP 5130.0157
ASN 5140.0136
LEU 5150.0225
VAL 5160.0142
LEU 5170.0132
ILE 5180.0085
ARG 5190.0232
MET 5200.0190
LYS 5210.0204
PRO 5220.0228
ASP 5230.0175
GLU 5240.0192
ASN 5250.0618
GLY 5260.0287
ARG 5270.0197
PHE 5280.0196
GLY 5290.0106
PHE 5300.0087
ASN 5310.0080
VAL 5320.0117
LYS 5330.0135
GLY 5340.0116
GLY 5350.0124
TYR 5360.0043
ASP 5370.0043
GLN 5380.0070
LYS 5390.0159
MET 5400.0075
PRO 5410.0119
VAL 5420.0085
ILE 5430.0109
VAL 5440.0151
SER 5450.0321
ARG 5460.0267
VAL 5470.0170
ALA 5480.0156
PRO 5490.0544
GLY 5500.0392
THR 5510.0089
PRO 5520.0125
ALA 5530.0102
ASP 5540.0143
LEU 5550.0080
CYS 5560.0075
VAL 5570.0522
PRO 5580.0338
ARG 5590.0163
LEU 5600.0122
ASN 5610.0226
GLU 5620.0212
GLY 5630.0069
ASP 5640.0010
GLN 5650.0063
VAL 5660.0075
VAL 5670.0104
LEU 5680.0114
ILE 5690.0103
ASN 5700.0119
GLY 5710.0188
ARG 5720.0119
ASP 5730.0147
ILE 5740.0111
ALA 5750.0151
GLU 5760.0051
HIS 5770.0111
THR 5780.0119
HIS 5790.0080
ASP 5800.0113
GLN 5810.0149
VAL 5820.0149
VAL 5830.0132
LEU 5840.0147
PHE 5850.0121
ILE 5860.0131
LYS 5870.0174
ALA 5880.0203
SER 5890.0130
CYS 5900.0279
GLU 5910.0534
GLY 5950.0055
GLU 5960.0108
LEU 5970.0129
MET 5980.0162
LEU 5990.0100
LEU 6000.0142
VAL 6010.0156
ARG 6020.0228
PRO 6030.0196
ASN 6040.0431
ILE 120.0144
GLU 130.0153
SER 140.0219
ASP 150.0194
VAL 160.0100
ILE 120.0000
GLU 130.0000
SER 140.0000
ASP 150.0000
VAL 160.0000
ILE 120.0000
GLU 130.0000
SER 140.0000
ASP 150.0000
VAL 160.0000
ILE 120.0278
GLU 130.0200
SER 140.0039
ASP 150.0032
VAL 160.0165

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.