CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN BINDING 10-JUN-10 3NFL  ***

CA strain for 2602021513101103345

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
HIS 512ASP 513 0.0001
ASP 513ASN 514 -0.0000
ASN 514LEU 515 0.0004
LEU 515VAL 516 -0.0000
VAL 516LEU 517 -0.0003
LEU 517ILE 518 -0.0002
ILE 518ARG 519 0.0000
ARG 519MET 520 0.0000
MET 520LYS 521 0.0001
LYS 521PRO 522 0.0000
PRO 522ASP 523 -0.0004
ASP 523GLU 524 0.0000
GLU 524ASN 525 -0.0004
ASN 525GLY 526 -0.0002
GLY 526ARG 527 0.0003
ARG 527PHE 528 -0.0001
PHE 528GLY 529 -0.0000
GLY 529PHE 530 0.0001
PHE 530ASN 531 -0.0003
ASN 531VAL 532 0.0004
VAL 532LYS 533 0.0001
LYS 533GLY 534 -0.0001
GLY 534GLY 535 -0.0001
GLY 535TYR 536 0.0000
TYR 536ASP 537 0.0001
ASP 537GLN 538 0.0005
GLN 538LYS 539 0.0001
LYS 539MET 540 -0.0001
MET 540MET 540 0.0282
MET 540PRO 541 -0.0002
PRO 541VAL 542 0.0005
VAL 542ILE 543 -0.0005
ILE 543VAL 544 0.0003
VAL 544SER 545 -0.0002
SER 545ARG 546 -0.0002
ARG 546VAL 547 -0.0000
VAL 547ALA 548 -0.0000
ALA 548PRO 549 -0.0002
PRO 549GLY 550 -0.0003
GLY 550THR 551 -0.0002
THR 551PRO 552 0.0001
PRO 552ALA 553 0.0002
ALA 553ASP 554 -0.0004
ASP 554LEU 555 0.0001
LEU 555CYS 556 0.0001
CYS 556VAL 557 -0.0003
VAL 557PRO 558 0.0001
PRO 558ARG 559 -0.0001
ARG 559LEU 560 -0.0001
LEU 560ASN 561 0.0001
ASN 561GLU 562 0.0000
GLU 562GLY 563 0.0004
GLY 563ASP 564 -0.0000
ASP 564GLN 565 -0.0003
GLN 565VAL 566 0.0002
VAL 566VAL 567 0.0000
VAL 567LEU 568 -0.0001
LEU 568ILE 569 0.0000
ILE 569ASN 570 0.0001
ASN 570GLY 571 -0.0003
GLY 571ARG 572 -0.0001
ARG 572ASP 573 0.0000
ASP 573ILE 574 -0.0001
ILE 574ALA 575 -0.0002
ALA 575GLU 576 0.0001
GLU 576HIS 577 -0.0001
HIS 577THR 578 0.0001
THR 578HIS 579 0.0001
HIS 579ASP 580 0.0002
ASP 580GLN 581 -0.0002
GLN 581VAL 582 -0.0000
VAL 582VAL 583 0.0000
VAL 583LEU 584 0.0002
LEU 584PHE 585 -0.0002
PHE 585ILE 586 0.0001
ILE 586LYS 587 0.0001
LYS 587ALA 588 -0.0000
ALA 588SER 589 -0.0001
SER 589CYS 590 -0.0000
CYS 590GLU 591 -0.0002
GLU 591ARG 592 0.0000
ARG 592HIS 593 -0.0000
HIS 593SER 594 0.0000
SER 594GLY 595 0.0001
GLY 595GLU 596 -0.0002
GLU 596LEU 597 0.0003
LEU 597MET 598 -0.0002
MET 598LEU 599 0.0002
LEU 599LEU 600 0.0001
LEU 600VAL 601 0.0002
VAL 601ARG 602 -0.0001
ARG 602PRO 603 -0.0001
PRO 603HIS 512 0.0585
HIS 512ASP 513 -0.0000
ASP 513ASN 514 0.0001
ASN 514LEU 515 0.0001
LEU 515VAL 516 -0.0000
VAL 516LEU 517 -0.0002
LEU 517ILE 518 -0.0001
ILE 518ARG 519 -0.0001
ARG 519MET 520 0.0001
MET 520LYS 521 0.0002
LYS 521PRO 522 -0.0000
PRO 522ASP 523 -0.0001
ASP 523GLU 524 0.0001
GLU 524ASN 525 0.0002
ASN 525GLY 526 -0.0002
GLY 526ARG 527 -0.0002
ARG 527PHE 528 0.0004
PHE 528GLY 529 0.0003
GLY 529PHE 530 0.0001
PHE 530ASN 531 -0.0000
ASN 531VAL 532 -0.0002
VAL 532LYS 533 0.0001
LYS 533GLY 534 0.0003
GLY 534GLY 535 0.0001
GLY 535TYR 536 -0.0002
TYR 536ASP 537 0.0003
ASP 537GLN 538 -0.0003
GLN 538LYS 539 0.0003
LYS 539MET 540 -0.0003
MET 540PRO 541 0.0002
PRO 541VAL 542 0.0001
VAL 542ILE 543 -0.0001
ILE 543VAL 544 0.0003
VAL 544SER 545 0.0000
SER 545ARG 546 -0.0000
ARG 546VAL 547 0.0002
VAL 547ALA 548 0.0003
ALA 548PRO 549 0.0002
PRO 549GLY 550 0.0000
GLY 550THR 551 -0.0001
THR 551PRO 552 -0.0003
PRO 552ALA 553 0.0000
ALA 553ASP 554 -0.0002
ASP 554LEU 555 -0.0003
LEU 555CYS 556 0.0001
CYS 556VAL 557 0.0004
VAL 557PRO 558 0.0002
PRO 558ARG 559 0.0001
ARG 559LEU 560 0.0001
LEU 560ASN 561 -0.0002
ASN 561GLU 562 0.0002
GLU 562GLY 563 -0.0002
GLY 563ASP 564 -0.0004
ASP 564GLN 565 -0.0000
GLN 565VAL 566 -0.0006
VAL 566VAL 567 0.0003
VAL 567LEU 568 -0.0001
LEU 568ILE 569 -0.0001
ILE 569ASN 570 0.0000
ASN 570GLY 571 -0.0000
GLY 571ARG 572 0.0003
ARG 572ARG 572 -0.0513
ARG 572ASP 573 0.0002
ASP 573ILE 574 -0.0000
ILE 574ALA 575 -0.0000
ALA 575GLU 576 -0.0001
GLU 576HIS 577 0.0001
HIS 577THR 578 0.0003
THR 578HIS 579 0.0001
HIS 579ASP 580 0.0002
ASP 580GLN 581 0.0003
GLN 581VAL 582 0.0003
VAL 582VAL 583 0.0002
VAL 583LEU 584 0.0001
LEU 584PHE 585 -0.0000
PHE 585ILE 586 -0.0001
ILE 586LYS 587 -0.0003
LYS 587ALA 588 0.0002
ALA 588SER 589 0.0002
SER 589CYS 590 -0.0002
CYS 590SER 594 0.0001
SER 594GLY 595 -0.0001
GLY 595GLU 596 -0.0001
GLU 596LEU 597 0.0001
LEU 597MET 598 0.0003
MET 598LEU 599 -0.0002
LEU 599LEU 600 0.0000
LEU 600VAL 601 -0.0001
VAL 601ARG 602 0.0001
ARG 602PRO 603 -0.0004
PRO 603PRO 511 -0.0000
PRO 511HIS 512 0.0002
HIS 512ASP 513 0.0004
ASP 513ASN 514 0.0001
ASN 514LEU 515 -0.0000
LEU 515VAL 516 -0.0001
VAL 516LEU 517 -0.0004
LEU 517ILE 518 -0.0001
ILE 518ARG 519 -0.0000
ARG 519MET 520 0.0004
MET 520LYS 521 -0.0004
LYS 521PRO 522 -0.0001
PRO 522ASP 523 -0.0001
ASP 523GLU 524 0.0004
GLU 524ASN 525 0.0001
ASN 525GLY 526 0.0001
GLY 526ARG 527 0.0001
ARG 527PHE 528 -0.0002
PHE 528GLY 529 0.0000
GLY 529PHE 530 0.0001
PHE 530ASN 531 -0.0006
ASN 531VAL 532 0.0001
VAL 532LYS 533 -0.0003
LYS 533GLY 534 -0.0004
GLY 534GLY 535 0.0005
GLY 535TYR 536 0.0000
TYR 536ASP 537 -0.0001
ASP 537GLN 538 -0.0003
GLN 538LYS 539 -0.0002
LYS 539MET 540 -0.0000
MET 540PRO 541 0.0001
PRO 541VAL 542 0.0001
VAL 542ILE 543 -0.0003
ILE 543VAL 544 0.0005
VAL 544SER 545 -0.0000
SER 545ARG 546 0.0001
ARG 546VAL 547 0.0003
VAL 547ALA 548 0.0003
ALA 548PRO 549 0.0007
PRO 549GLY 550 -0.0000
GLY 550THR 551 0.0001
THR 551PRO 552 0.0001
PRO 552ALA 553 0.0000
ALA 553ASP 554 -0.0001
ASP 554LEU 555 -0.0007
LEU 555CYS 556 -0.0001
CYS 556VAL 557 -0.0003
VAL 557PRO 558 0.0003
PRO 558ARG 559 0.0002
ARG 559LEU 560 0.0001
LEU 560ASN 561 0.0003
ASN 561GLU 562 -0.0003
GLU 562GLY 563 0.0000
GLY 563ASP 564 0.0002
ASP 564GLN 565 -0.0002
GLN 565VAL 566 -0.0001
VAL 566VAL 567 0.0001
VAL 567LEU 568 0.0002
LEU 568ILE 569 -0.0003
ILE 569ASN 570 0.0002
ASN 570GLY 571 0.0003
GLY 571ARG 572 0.0002
ARG 572ASP 573 -0.0001
ASP 573ILE 574 0.0005
ILE 574ALA 575 -0.0000
ALA 575GLU 576 0.0000
GLU 576HIS 577 -0.0003
HIS 577THR 578 0.0001
THR 578HIS 579 0.0000
HIS 579ASP 580 0.0004
ASP 580GLN 581 0.0000
GLN 581VAL 582 -0.0004
VAL 582VAL 583 0.0002
VAL 583LEU 584 0.0001
LEU 584PHE 585 -0.0002
PHE 585ILE 586 -0.0001
ILE 586LYS 587 0.0001
LYS 587ALA 588 -0.0003
ALA 588SER 589 -0.0003
SER 589CYS 590 0.0006
CYS 590GLU 596 -0.0000
GLU 596LEU 597 0.0003
LEU 597MET 598 0.0000
MET 598MET 598 -0.0512
MET 598LEU 599 -0.0002
LEU 599LEU 600 -0.0001
LEU 600VAL 601 -0.0002
VAL 601ARG 602 0.0002
ARG 602PRO 603 0.0001
PRO 603ASN 604 0.0001
ASN 604ASP 513 -0.0314
ASP 513ASN 514 -0.0002
ASN 514LEU 515 0.0002
LEU 515VAL 516 -0.0003
VAL 516LEU 517 0.0002
LEU 517ILE 518 -0.0003
ILE 518ARG 519 0.0002
ARG 519MET 520 0.0000
MET 520LYS 521 -0.0001
LYS 521PRO 522 0.0004
PRO 522ASP 523 -0.0002
ASP 523GLU 524 -0.0002
GLU 524ASN 525 0.0001
ASN 525GLY 526 -0.0000
GLY 526ARG 527 -0.0001
ARG 527PHE 528 -0.0002
PHE 528GLY 529 0.0001
GLY 529PHE 530 0.0002
PHE 530ASN 531 -0.0001
ASN 531VAL 532 0.0000
VAL 532LYS 533 -0.0000
LYS 533GLY 534 -0.0000
GLY 534GLY 535 -0.0000
GLY 535TYR 536 0.0001
TYR 536ASP 537 0.0001
ASP 537GLN 538 0.0002
GLN 538LYS 539 0.0006
LYS 539MET 540 -0.0001
MET 540PRO 541 0.0004
PRO 541VAL 542 0.0002
VAL 542ILE 543 -0.0000
ILE 543VAL 544 0.0000
VAL 544SER 545 -0.0000
SER 545ARG 546 0.0000
ARG 546VAL 547 -0.0004
VAL 547ALA 548 0.0003
ALA 548PRO 549 0.0004
PRO 549GLY 550 -0.0002
GLY 550THR 551 -0.0000
THR 551PRO 552 -0.0005
PRO 552ALA 553 0.0002
ALA 553ASP 554 0.0001
ASP 554LEU 555 -0.0001
LEU 555CYS 556 0.0001
CYS 556VAL 557 -0.0001
VAL 557PRO 558 0.0003
PRO 558ARG 559 0.0002
ARG 559LEU 560 -0.0001
LEU 560ASN 561 0.0000
ASN 561GLU 562 0.0004
GLU 562GLY 563 -0.0000
GLY 563ASP 564 0.0003
ASP 564GLN 565 -0.0002
GLN 565VAL 566 -0.0002
VAL 566VAL 567 -0.0002
VAL 567LEU 568 0.0003
LEU 568ILE 569 -0.0002
ILE 569ASN 570 -0.0003
ASN 570GLY 571 0.0001
GLY 571ARG 572 0.0002
ARG 572ASP 573 0.0002
ASP 573ILE 574 0.0001
ILE 574ALA 575 0.0002
ALA 575GLU 576 -0.0001
GLU 576HIS 577 0.0002
HIS 577THR 578 0.0003
THR 578HIS 579 0.0000
HIS 579ASP 580 -0.0002
ASP 580GLN 581 0.0000
GLN 581VAL 582 0.0002
VAL 582VAL 583 0.0003
VAL 583LEU 584 0.0001
LEU 584PHE 585 0.0000
PHE 585ILE 586 0.0000
ILE 586LYS 587 0.0004
LYS 587ALA 588 0.0003
ALA 588SER 589 -0.0002
SER 589CYS 590 0.0003
CYS 590GLU 591 -0.0001
GLU 591GLY 595 0.0001
GLY 595GLU 596 0.0001
GLU 596LEU 597 -0.0001
LEU 597MET 598 0.0002
MET 598LEU 599 0.0000
LEU 599LEU 600 0.0003
LEU 600VAL 601 0.0001
VAL 601ARG 602 0.0001
ARG 602PRO 603 -0.0000
PRO 603ASN 604 0.0003
ASN 604ILE 12 0.0000
ILE 12GLU 13 -0.0003
GLU 13SER 14 0.0001
SER 14ASP 15 -0.0000
ASP 15VAL 16 0.0004
VAL 16ILE 12 -0.0434
ILE 12GLU 13 0.0004
GLU 13SER 14 -0.0002
SER 14ASP 15 -0.0005
ASP 15VAL 16 0.0002
VAL 16ILE 12 0.0000
ILE 12GLU 13 0.0004
GLU 13SER 14 -0.0000
SER 14ASP 15 0.0000
ASP 15VAL 16 -0.0002
VAL 16ILE 12 0.0049
ILE 12GLU 13 0.0001
GLU 13SER 14 -0.0000
SER 14ASP 15 0.0001
ASP 15VAL 16 -0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.