CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN BINDING 10-JUN-10 3NFL  ***

<R2> analysis for 2602021513101103345

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0429
HIS 5120.0056
ASP 5130.0062
ASN 5140.0065
LEU 5150.0060
VAL 5160.0060
LEU 5170.0057
ILE 5180.0055
ARG 5190.0053
MET 5200.0050
LYS 5210.0047
PRO 5220.0042
ASP 5230.0042
GLU 5240.0038
ASN 5250.0034
GLY 5260.0035
ARG 5270.0038
PHE 5280.0043
GLY 5290.0045
PHE 5300.0046
ASN 5310.0044
VAL 5320.0043
LYS 5330.0044
GLY 5340.0042
GLY 5350.0038
TYR 5360.0036
ASP 5370.0034
GLN 5380.0039
LYS 5390.0041
MET 5400.0045
MET 5400.0045
PRO 5410.0046
VAL 5420.0044
ILE 5430.0049
VAL 5440.0050
SER 5450.0051
ARG 5460.0051
VAL 5470.0052
ALA 5480.0052
PRO 5490.0055
GLY 5500.0054
THR 5510.0050
PRO 5520.0050
ALA 5530.0051
ASP 5540.0055
LEU 5550.0057
CYS 5560.0057
VAL 5570.0062
PRO 5580.0063
ARG 5590.0060
LEU 5600.0056
ASN 5610.0058
GLU 5620.0057
GLY 5630.0057
ASP 5640.0056
GLN 5650.0052
VAL 5660.0048
VAL 5670.0048
LEU 5680.0045
ILE 5690.0042
ASN 5700.0043
GLY 5710.0045
ARG 5720.0040
ASP 5730.0041
ILE 5740.0038
ALA 5750.0040
GLU 5760.0035
HIS 5770.0032
THR 5780.0031
HIS 5790.0034
ASP 5800.0029
GLN 5810.0029
VAL 5820.0034
VAL 5830.0032
LEU 5840.0028
PHE 5850.0033
ILE 5860.0036
LYS 5870.0031
ALA 5880.0031
SER 5890.0034
CYS 5900.0035
GLU 5910.0037
ARG 5920.0041
HIS 5930.0047
SER 5940.0049
GLY 5950.0044
GLU 5960.0046
LEU 5970.0044
MET 5980.0048
LEU 5990.0048
LEU 6000.0052
VAL 6010.0054
ARG 6020.0058
PRO 6030.0061
HIS 5120.0217
ASP 5130.0259
ASN 5140.0284
LEU 5150.0256
VAL 5160.0266
LEU 5170.0256
ILE 5180.0245
ARG 5190.0244
MET 5200.0228
LYS 5210.0218
PRO 5220.0184
ASP 5230.0182
GLU 5240.0172
ASN 5250.0140
GLY 5260.0148
ARG 5270.0143
PHE 5280.0167
GLY 5290.0171
PHE 5300.0171
ASN 5310.0162
VAL 5320.0151
LYS 5330.0160
GLY 5340.0152
GLY 5350.0131
TYR 5360.0131
ASP 5370.0154
GLN 5380.0168
LYS 5390.0167
MET 5400.0170
PRO 5410.0157
VAL 5420.0148
ILE 5430.0178
VAL 5440.0187
SER 5450.0204
ARG 5460.0210
VAL 5470.0216
ALA 5480.0216
PRO 5490.0249
GLY 5500.0247
THR 5510.0213
PRO 5520.0219
ALA 5530.0215
ASP 5540.0247
LEU 5550.0271
CYS 5560.0272
VAL 5570.0307
PRO 5580.0300
ARG 5590.0276
LEU 5600.0238
ASN 5610.0251
GLU 5620.0242
GLY 5630.0237
ASP 5640.0221
GLN 5650.0191
VAL 5660.0167
VAL 5670.0167
LEU 5680.0170
ILE 5690.0162
ASN 5700.0193
GLY 5710.0202
ARG 5720.0170
ARG 5720.0170
ASP 5730.0149
ILE 5740.0126
ALA 5750.0122
GLU 5760.0116
HIS 5770.0118
THR 5780.0126
HIS 5790.0126
ASP 5800.0129
GLN 5810.0125
VAL 5820.0117
VAL 5830.0116
LEU 5840.0128
PHE 5850.0137
ILE 5860.0136
LYS 5870.0134
ALA 5880.0160
SER 5890.0180
CYS 5900.0212
SER 5940.0277
GLY 5950.0234
GLU 5960.0230
LEU 5970.0197
MET 5980.0210
LEU 5990.0195
LEU 6000.0208
VAL 6010.0211
ARG 6020.0229
PRO 6030.0260
PRO 5110.0366
HIS 5120.0363
ASP 5130.0391
ASN 5140.0397
LEU 5150.0354
VAL 5160.0337
LEU 5170.0295
ILE 5180.0294
ARG 5190.0264
MET 5200.0272
LYS 5210.0260
PRO 5220.0271
ASP 5230.0309
GLU 5240.0315
ASN 5250.0300
GLY 5260.0262
ARG 5270.0283
PHE 5280.0293
GLY 5290.0331
PHE 5300.0328
ASN 5310.0322
VAL 5320.0303
LYS 5330.0316
GLY 5340.0306
GLY 5350.0277
TYR 5360.0277
ASP 5370.0263
GLN 5380.0296
LYS 5390.0328
MET 5400.0341
PRO 5410.0335
VAL 5420.0311
ILE 5430.0343
VAL 5440.0346
SER 5450.0368
ARG 5460.0379
VAL 5470.0379
ALA 5480.0394
PRO 5490.0423
GLY 5500.0408
THR 5510.0364
PRO 5520.0330
ALA 5530.0336
ASP 5540.0379
LEU 5550.0370
CYS 5560.0336
VAL 5570.0346
PRO 5580.0352
ARG 5590.0367
LEU 5600.0352
ASN 5610.0391
GLU 5620.0400
GLY 5630.0402
ASP 5640.0371
GLN 5650.0350
VAL 5660.0305
VAL 5670.0295
LEU 5680.0253
ILE 5690.0222
ASN 5700.0196
GLY 5710.0207
ARG 5720.0207
ASP 5730.0243
ILE 5740.0246
ALA 5750.0284
GLU 5760.0264
HIS 5770.0231
THR 5780.0227
HIS 5790.0238
ASP 5800.0200
GLN 5810.0185
VAL 5820.0215
VAL 5830.0214
LEU 5840.0176
PHE 5850.0179
ILE 5860.0208
LYS 5870.0197
ALA 5880.0165
SER 5890.0185
CYS 5900.0201
GLU 5960.0215
LEU 5970.0223
MET 5980.0231
MET 5980.0232
LEU 5990.0261
LEU 6000.0285
VAL 6010.0324
ARG 6020.0366
PRO 6030.0399
ASN 6040.0429
ASP 5130.0027
ASN 5140.0029
LEU 5150.0025
VAL 5160.0026
LEU 5170.0024
ILE 5180.0026
ARG 5190.0028
MET 5200.0031
LYS 5210.0034
PRO 5220.0036
ASP 5230.0042
GLU 5240.0046
ASN 5250.0044
GLY 5260.0038
ARG 5270.0037
PHE 5280.0034
GLY 5290.0036
PHE 5300.0032
ASN 5310.0029
VAL 5320.0024
LYS 5330.0021
GLY 5340.0017
GLY 5350.0014
TYR 5360.0014
ASP 5370.0014
GLN 5380.0014
LYS 5390.0014
MET 5400.0016
PRO 5410.0017
VAL 5420.0018
ILE 5430.0022
VAL 5440.0026
SER 5450.0028
ARG 5460.0033
VAL 5470.0036
ALA 5480.0040
PRO 5490.0045
GLY 5500.0047
THR 5510.0042
PRO 5520.0038
ALA 5530.0035
ASP 5540.0040
LEU 5550.0042
CYS 5560.0037
VAL 5570.0037
PRO 5580.0035
ARG 5590.0036
LEU 5600.0032
ASN 5610.0034
GLU 5620.0032
GLY 5630.0029
ASP 5640.0027
GLN 5650.0022
VAL 5660.0019
VAL 5670.0017
LEU 5680.0016
ILE 5690.0017
ASN 5700.0019
GLY 5710.0015
ARG 5720.0015
ASP 5730.0014
ILE 5740.0014
ALA 5750.0014
GLU 5760.0015
HIS 5770.0015
THR 5780.0016
HIS 5790.0017
ASP 5800.0021
GLN 5810.0020
VAL 5820.0018
VAL 5830.0022
LEU 5840.0024
PHE 5850.0022
ILE 5860.0024
LYS 5870.0028
ALA 5880.0027
SER 5890.0027
CYS 5900.0033
GLU 5910.0033
GLY 5950.0032
GLU 5960.0029
LEU 5970.0026
MET 5980.0022
LEU 5990.0021
LEU 6000.0020
VAL 6010.0023
ARG 6020.0025
PRO 6030.0029
ASN 6040.0031
ILE 120.0041
GLU 130.0041
SER 140.0038
ASP 150.0039
VAL 160.0038
ILE 120.0183
GLU 130.0163
SER 140.0139
ASP 150.0139
VAL 160.0129
ILE 120.0295
GLU 130.0306
SER 140.0282
ASP 150.0296
VAL 160.0271
ILE 120.0022
GLU 130.0025
SER 140.0027
ASP 150.0031
VAL 160.0031

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.