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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN BINDING 10-JUN-10 3NFL  ***

<R2> analysis for 2602021513101103345

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0397
HIS 5120.0349
ASP 5130.0381
ASN 5140.0397
LEU 5150.0367
VAL 5160.0362
LEU 5170.0337
ILE 5180.0324
ARG 5190.0306
MET 5200.0289
LYS 5210.0264
PRO 5220.0243
ASP 5230.0241
GLU 5240.0216
ASN 5250.0201
GLY 5260.0205
ARG 5270.0229
PHE 5280.0259
GLY 5290.0279
PHE 5300.0288
ASN 5310.0283
VAL 5320.0278
LYS 5330.0285
GLY 5340.0277
GLY 5350.0252
TYR 5360.0238
ASP 5370.0230
GLN 5380.0262
LYS 5390.0274
MET 5400.0294
MET 5400.0294
PRO 5410.0297
VAL 5420.0285
ILE 5430.0311
VAL 5440.0314
SER 5450.0326
ARG 5460.0327
VAL 5470.0327
ALA 5480.0323
PRO 5490.0339
GLY 5500.0326
THR 5510.0300
PRO 5520.0294
ALA 5530.0307
ASP 5540.0335
LEU 5550.0339
CYS 5560.0335
VAL 5570.0365
PRO 5580.0370
ARG 5590.0359
LEU 5600.0338
ASN 5610.0359
GLU 5620.0356
GLY 5630.0360
ASP 5640.0346
GLN 5650.0326
VAL 5660.0297
VAL 5670.0294
LEU 5680.0274
ILE 5690.0253
ASN 5700.0250
GLY 5710.0263
ARG 5720.0238
ASP 5730.0250
ILE 5740.0243
ALA 5750.0255
GLU 5760.0225
HIS 5770.0211
THR 5780.0209
HIS 5790.0225
ASP 5800.0196
GLN 5810.0187
VAL 5820.0217
VAL 5830.0209
LEU 5840.0179
PHE 5850.0198
ILE 5860.0216
LYS 5870.0189
ALA 5880.0179
SER 5890.0189
CYS 5900.0184
GLU 5910.0206
ARG 5920.0230
HIS 5930.0256
SER 5940.0261
GLY 5950.0239
GLU 5960.0260
LEU 5970.0255
MET 5980.0279
LEU 5990.0290
LEU 6000.0312
VAL 6010.0329
ARG 6020.0356
PRO 6030.0378
HIS 5120.0142
ASP 5130.0137
ASN 5140.0139
LEU 5150.0118
VAL 5160.0111
LEU 5170.0086
ILE 5180.0105
ARG 5190.0099
MET 5200.0122
LYS 5210.0131
PRO 5220.0143
ASP 5230.0176
GLU 5240.0185
ASN 5250.0170
GLY 5260.0138
ARG 5270.0152
PHE 5280.0153
GLY 5290.0183
PHE 5300.0177
ASN 5310.0183
VAL 5320.0169
LYS 5330.0190
GLY 5340.0189
GLY 5350.0172
TYR 5360.0184
ASP 5370.0195
GLN 5380.0213
LYS 5390.0228
MET 5400.0219
PRO 5410.0192
VAL 5420.0167
ILE 5430.0185
VAL 5440.0183
SER 5450.0215
ARG 5460.0218
VAL 5470.0208
ALA 5480.0226
PRO 5490.0246
GLY 5500.0240
THR 5510.0206
PRO 5520.0175
ALA 5530.0166
ASP 5540.0199
LEU 5550.0200
CYS 5560.0166
VAL 5570.0157
PRO 5580.0147
ARG 5590.0170
LEU 5600.0164
ASN 5610.0192
GLU 5620.0214
GLY 5630.0213
ASP 5640.0179
GLN 5650.0167
VAL 5660.0134
VAL 5670.0118
LEU 5680.0083
ILE 5690.0068
ASN 5700.0036
GLY 5710.0039
ARG 5720.0063
ARG 5720.0062
ASP 5730.0097
ILE 5740.0116
ALA 5750.0149
GLU 5760.0158
HIS 5770.0137
THR 5780.0148
HIS 5790.0149
ASP 5800.0125
GLN 5810.0102
VAL 5820.0106
VAL 5830.0108
LEU 5840.0075
PHE 5850.0062
ILE 5860.0081
LYS 5870.0079
ALA 5880.0044
SER 5890.0063
CYS 5900.0051
SER 5940.0099
GLY 5950.0094
GLU 5960.0089
LEU 5970.0079
MET 5980.0066
LEU 5990.0086
LEU 6000.0091
VAL 6010.0126
ARG 6020.0153
PRO 6030.0177
PRO 5110.0028
HIS 5120.0017
ASP 5130.0032
ASN 5140.0066
LEU 5150.0061
VAL 5160.0086
LEU 5170.0091
ILE 5180.0103
ARG 5190.0116
MET 5200.0120
LYS 5210.0126
PRO 5220.0110
ASP 5230.0131
GLU 5240.0134
ASN 5250.0105
GLY 5260.0086
ARG 5270.0089
PHE 5280.0098
GLY 5290.0117
PHE 5300.0106
ASN 5310.0101
VAL 5320.0085
LYS 5330.0105
GLY 5340.0103
GLY 5350.0095
TYR 5360.0116
ASP 5370.0141
GLN 5380.0144
LYS 5390.0146
MET 5400.0125
PRO 5410.0091
VAL 5420.0071
ILE 5430.0088
VAL 5440.0098
SER 5450.0127
ARG 5460.0139
VAL 5470.0142
ALA 5480.0162
PRO 5490.0190
GLY 5500.0191
THR 5510.0156
PRO 5520.0142
ALA 5530.0128
ASP 5540.0163
LEU 5550.0179
CYS 5560.0158
VAL 5570.0169
PRO 5580.0151
ARG 5590.0149
LEU 5600.0120
ASN 5610.0134
GLU 5620.0137
GLY 5630.0124
ASP 5640.0093
GLN 5650.0068
VAL 5660.0039
VAL 5670.0015
LEU 5680.0027
ILE 5690.0033
ASN 5700.0067
GLY 5710.0073
ARG 5720.0064
ASP 5730.0056
ILE 5740.0052
ALA 5750.0072
GLU 5760.0102
HIS 5770.0088
THR 5780.0098
HIS 5790.0085
ASP 5800.0076
GLN 5810.0067
VAL 5820.0041
VAL 5830.0035
LEU 5840.0032
PHE 5850.0032
ILE 5860.0022
LYS 5870.0024
ALA 5880.0049
SER 5890.0068
CYS 5900.0087
GLU 5960.0112
LEU 5970.0083
MET 5980.0082
MET 5980.0082
LEU 5990.0058
LEU 6000.0050
VAL 6010.0053
ARG 6020.0061
PRO 6030.0097
ASN 6040.0113
ASP 5130.0127
ASN 5140.0130
LEU 5150.0102
VAL 5160.0097
LEU 5170.0082
ILE 5180.0094
ARG 5190.0102
MET 5200.0128
LYS 5210.0150
PRO 5220.0169
ASP 5230.0200
GLU 5240.0228
ASN 5250.0223
GLY 5260.0192
ARG 5270.0180
PHE 5280.0157
GLY 5290.0170
PHE 5300.0145
ASN 5310.0132
VAL 5320.0103
LYS 5330.0090
GLY 5340.0072
GLY 5350.0074
TYR 5360.0086
ASP 5370.0093
GLN 5380.0074
LYS 5390.0073
MET 5400.0067
PRO 5410.0068
VAL 5420.0069
ILE 5430.0084
VAL 5440.0105
SER 5450.0122
ARG 5460.0149
VAL 5470.0162
ALA 5480.0191
PRO 5490.0214
GLY 5500.0220
THR 5510.0194
PRO 5520.0169
ALA 5530.0150
ASP 5540.0175
LEU 5550.0183
CYS 5560.0153
VAL 5570.0146
PRO 5580.0139
ARG 5590.0148
LEU 5600.0130
ASN 5610.0142
GLU 5620.0137
GLY 5630.0120
ASP 5640.0104
GLN 5650.0082
VAL 5660.0070
VAL 5670.0067
LEU 5680.0068
ILE 5690.0079
ASN 5700.0088
GLY 5710.0080
ARG 5720.0092
ASP 5730.0088
ILE 5740.0083
ALA 5750.0086
GLU 5760.0103
HIS 5770.0102
THR 5780.0102
HIS 5790.0097
ASP 5800.0124
GLN 5810.0123
VAL 5820.0100
VAL 5830.0119
LEU 5840.0140
PHE 5850.0121
ILE 5860.0118
LYS 5870.0149
ALA 5880.0150
SER 5890.0137
CYS 5900.0166
GLU 5910.0173
GLY 5950.0151
GLU 5960.0129
LEU 5970.0110
MET 5980.0085
LEU 5990.0076
LEU 6000.0069
VAL 6010.0081
ARG 6020.0097
PRO 6030.0119
ASN 6040.0132
ILE 120.0274
GLU 130.0275
SER 140.0250
ASP 150.0252
VAL 160.0239
ILE 120.0214
GLU 130.0196
SER 140.0171
ASP 150.0174
VAL 160.0145
ILE 120.0138
GLU 130.0119
SER 140.0093
ASP 150.0091
VAL 160.0067
ILE 120.0109
GLU 130.0120
SER 140.0135
ASP 150.0155
VAL 160.0149

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.