CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN BINDING 10-JUN-10 3NFL  ***

<R2> analysis for 2602021513101103345

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0971
HIS 5120.0000
ASP 5130.0000
ASN 5140.0000
LEU 5150.0000
VAL 5160.0000
LEU 5170.0000
ILE 5180.0000
ARG 5190.0000
MET 5200.0000
LYS 5210.0000
PRO 5220.0000
ASP 5230.0000
GLU 5240.0000
ASN 5250.0000
GLY 5260.0000
ARG 5270.0000
PHE 5280.0000
GLY 5290.0000
PHE 5300.0000
ASN 5310.0000
VAL 5320.0000
LYS 5330.0000
GLY 5340.0000
GLY 5350.0000
TYR 5360.0000
ASP 5370.0000
GLN 5380.0000
LYS 5390.0000
MET 5400.0000
MET 5400.0000
PRO 5410.0000
VAL 5420.0000
ILE 5430.0000
VAL 5440.0000
SER 5450.0000
ARG 5460.0000
VAL 5470.0000
ALA 5480.0000
PRO 5490.0000
GLY 5500.0000
THR 5510.0000
PRO 5520.0000
ALA 5530.0000
ASP 5540.0000
LEU 5550.0000
CYS 5560.0000
VAL 5570.0000
PRO 5580.0000
ARG 5590.0000
LEU 5600.0000
ASN 5610.0000
GLU 5620.0000
GLY 5630.0000
ASP 5640.0000
GLN 5650.0000
VAL 5660.0000
VAL 5670.0000
LEU 5680.0000
ILE 5690.0000
ASN 5700.0000
GLY 5710.0000
ARG 5720.0000
ASP 5730.0000
ILE 5740.0000
ALA 5750.0000
GLU 5760.0000
HIS 5770.0000
THR 5780.0000
HIS 5790.0000
ASP 5800.0000
GLN 5810.0000
VAL 5820.0000
VAL 5830.0000
LEU 5840.0000
PHE 5850.0000
ILE 5860.0000
LYS 5870.0000
ALA 5880.0000
SER 5890.0000
CYS 5900.0000
GLU 5910.0000
ARG 5920.0000
HIS 5930.0000
SER 5940.0000
GLY 5950.0000
GLU 5960.0000
LEU 5970.0000
MET 5980.0000
LEU 5990.0000
LEU 6000.0000
VAL 6010.0000
ARG 6020.0000
PRO 6030.0000
HIS 5120.0407
ASP 5130.0414
ASN 5140.0208
LEU 5150.0120
VAL 5160.0045
LEU 5170.0057
ILE 5180.0070
ARG 5190.0047
MET 5200.0089
LYS 5210.0113
PRO 5220.0174
ASP 5230.0355
GLU 5240.0798
ASN 5250.0673
GLY 5260.0274
ARG 5270.0189
PHE 5280.0043
GLY 5290.0092
PHE 5300.0119
ASN 5310.0115
VAL 5320.0071
LYS 5330.0041
GLY 5340.0125
GLY 5350.0205
TYR 5360.0360
ASP 5370.0428
GLN 5380.0360
LYS 5390.0447
MET 5400.0295
PRO 5410.0190
VAL 5420.0044
ILE 5430.0035
VAL 5440.0063
SER 5450.0084
ARG 5460.0136
VAL 5470.0129
ALA 5480.0157
PRO 5490.0173
GLY 5500.0107
THR 5510.0060
PRO 5520.0035
ALA 5530.0075
ASP 5540.0120
LEU 5550.0123
CYS 5560.0102
VAL 5570.0137
PRO 5580.0128
ARG 5590.0121
LEU 5600.0095
ASN 5610.0100
GLU 5620.0092
GLY 5630.0045
ASP 5640.0015
GLN 5650.0010
VAL 5660.0038
VAL 5670.0064
LEU 5680.0075
ILE 5690.0098
ASN 5700.0125
GLY 5710.0120
ARG 5720.0088
ARG 5720.0088
ASP 5730.0036
ILE 5740.0034
ALA 5750.0155
GLU 5760.0204
HIS 5770.0175
THR 5780.0245
HIS 5790.0189
ASP 5800.0241
GLN 5810.0170
VAL 5820.0108
VAL 5830.0157
LEU 5840.0159
PHE 5850.0138
ILE 5860.0134
LYS 5870.0152
ALA 5880.0166
SER 5890.0217
CYS 5900.0218
SER 5940.0205
GLY 5950.0122
GLU 5960.0065
LEU 5970.0047
MET 5980.0074
LEU 5990.0072
LEU 6000.0087
VAL 6010.0043
ARG 6020.0066
PRO 6030.0071
PRO 5110.0767
HIS 5120.0971
ASP 5130.0871
ASN 5140.0465
LEU 5150.0250
VAL 5160.0231
LEU 5170.0215
ILE 5180.0185
ARG 5190.0200
MET 5200.0137
LYS 5210.0182
PRO 5220.0166
ASP 5230.0277
GLU 5240.0520
ASN 5250.0432
GLY 5260.0285
ARG 5270.0173
PHE 5280.0068
GLY 5290.0063
PHE 5300.0059
ASN 5310.0066
VAL 5320.0054
LYS 5330.0116
GLY 5340.0139
GLY 5350.0217
TYR 5360.0286
ASP 5370.0253
GLN 5380.0307
LYS 5390.0452
MET 5400.0350
PRO 5410.0147
VAL 5420.0072
ILE 5430.0035
VAL 5440.0041
SER 5450.0075
ARG 5460.0091
VAL 5470.0139
ALA 5480.0180
PRO 5490.0287
GLY 5500.0232
THR 5510.0103
PRO 5520.0080
ALA 5530.0111
ASP 5540.0226
LEU 5550.0275
CYS 5560.0264
VAL 5570.0357
PRO 5580.0307
ARG 5590.0263
LEU 5600.0174
ASN 5610.0169
GLU 5620.0160
GLY 5630.0183
ASP 5640.0116
GLN 5650.0128
VAL 5660.0042
VAL 5670.0059
LEU 5680.0043
ILE 5690.0062
ASN 5700.0104
GLY 5710.0052
ARG 5720.0095
ASP 5730.0140
ILE 5740.0126
ALA 5750.0245
GLU 5760.0328
HIS 5770.0189
THR 5780.0138
HIS 5790.0083
ASP 5800.0026
GLN 5810.0065
VAL 5820.0050
VAL 5830.0035
LEU 5840.0092
PHE 5850.0098
ILE 5860.0087
LYS 5870.0141
ALA 5880.0177
SER 5890.0178
CYS 5900.0224
GLU 5960.0178
LEU 5970.0130
MET 5980.0122
MET 5980.0122
LEU 5990.0100
LEU 6000.0123
VAL 6010.0048
ARG 6020.0172
PRO 6030.0246
ASN 6040.0356
ASP 5130.0000
ASN 5140.0000
LEU 5150.0000
VAL 5160.0000
LEU 5170.0000
ILE 5180.0000
ARG 5190.0000
MET 5200.0000
LYS 5210.0000
PRO 5220.0000
ASP 5230.0000
GLU 5240.0000
ASN 5250.0000
GLY 5260.0000
ARG 5270.0000
PHE 5280.0000
GLY 5290.0000
PHE 5300.0000
ASN 5310.0000
VAL 5320.0000
LYS 5330.0000
GLY 5340.0000
GLY 5350.0000
TYR 5360.0000
ASP 5370.0000
GLN 5380.0000
LYS 5390.0000
MET 5400.0000
PRO 5410.0000
VAL 5420.0000
ILE 5430.0000
VAL 5440.0000
SER 5450.0000
ARG 5460.0000
VAL 5470.0000
ALA 5480.0000
PRO 5490.0000
GLY 5500.0000
THR 5510.0000
PRO 5520.0000
ALA 5530.0000
ASP 5540.0000
LEU 5550.0000
CYS 5560.0000
VAL 5570.0000
PRO 5580.0000
ARG 5590.0000
LEU 5600.0000
ASN 5610.0000
GLU 5620.0000
GLY 5630.0000
ASP 5640.0000
GLN 5650.0000
VAL 5660.0000
VAL 5670.0000
LEU 5680.0000
ILE 5690.0000
ASN 5700.0000
GLY 5710.0000
ARG 5720.0000
ASP 5730.0000
ILE 5740.0000
ALA 5750.0000
GLU 5760.0000
HIS 5770.0000
THR 5780.0000
HIS 5790.0000
ASP 5800.0000
GLN 5810.0000
VAL 5820.0000
VAL 5830.0000
LEU 5840.0000
PHE 5850.0000
ILE 5860.0000
LYS 5870.0000
ALA 5880.0000
SER 5890.0000
CYS 5900.0000
GLU 5910.0000
GLY 5950.0000
GLU 5960.0000
LEU 5970.0000
MET 5980.0000
LEU 5990.0000
LEU 6000.0000
VAL 6010.0000
ARG 6020.0000
PRO 6030.0000
ASN 6040.0000
ILE 120.0000
GLU 130.0000
SER 140.0000
ASP 150.0000
VAL 160.0000
ILE 120.0117
GLU 130.0101
SER 140.0093
ASP 150.0139
VAL 160.0131
ILE 120.0260
GLU 130.0176
SER 140.0139
ASP 150.0144
VAL 160.0106
ILE 120.0000
GLU 130.0000
SER 140.0000
ASP 150.0000
VAL 160.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.