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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN BINDING 10-JUN-10 3NFL  ***

<R2> analysis for 2602021513101103345

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0413
HIS 5120.0129
ASP 5130.0136
ASN 5140.0140
LEU 5150.0133
VAL 5160.0132
LEU 5170.0126
ILE 5180.0128
ARG 5190.0125
MET 5200.0129
LYS 5210.0129
PRO 5220.0134
ASP 5230.0143
GLU 5240.0147
ASN 5250.0148
GLY 5260.0138
ARG 5270.0141
PHE 5280.0139
GLY 5290.0147
PHE 5300.0143
ASN 5310.0142
VAL 5320.0135
LYS 5330.0135
GLY 5340.0129
GLY 5350.0122
TYR 5360.0117
ASP 5370.0118
GLN 5380.0125
LYS 5390.0123
MET 5400.0128
MET 5400.0128
PRO 5410.0128
VAL 5420.0127
ILE 5430.0135
VAL 5440.0139
SER 5450.0147
ARG 5460.0152
VAL 5470.0152
ALA 5480.0159
PRO 5490.0164
GLY 5500.0161
THR 5510.0152
PRO 5520.0143
ALA 5530.0141
ASP 5540.0151
LEU 5550.0149
CYS 5560.0140
VAL 5570.0141
PRO 5580.0140
ARG 5590.0144
LEU 5600.0141
ASN 5610.0148
GLU 5620.0150
GLY 5630.0147
ASP 5640.0140
GLN 5650.0133
VAL 5660.0126
VAL 5670.0121
LEU 5680.0116
ILE 5690.0116
ASN 5700.0113
GLY 5710.0111
ARG 5720.0110
ASP 5730.0112
ILE 5740.0114
ALA 5750.0115
GLU 5760.0112
HIS 5770.0113
THR 5780.0116
HIS 5790.0122
ASP 5800.0122
GLN 5810.0117
VAL 5820.0119
VAL 5830.0124
LEU 5840.0121
PHE 5850.0117
ILE 5860.0122
LYS 5870.0125
ALA 5880.0119
SER 5890.0121
CYS 5900.0117
GLU 5910.0113
ARG 5920.0115
HIS 5930.0112
SER 5940.0115
GLY 5950.0120
GLU 5960.0121
LEU 5970.0121
MET 5980.0119
LEU 5990.0122
LEU 6000.0123
VAL 6010.0129
ARG 6020.0135
PRO 6030.0144
HIS 5120.0372
ASP 5130.0367
ASN 5140.0316
LEU 5150.0279
VAL 5160.0240
LEU 5170.0238
ILE 5180.0188
ARG 5190.0199
MET 5200.0178
LYS 5210.0194
PRO 5220.0172
ASP 5230.0233
GLU 5240.0275
ASN 5250.0238
GLY 5260.0168
ARG 5270.0152
PHE 5280.0122
GLY 5290.0140
PHE 5300.0088
ASN 5310.0121
VAL 5320.0129
LYS 5330.0199
GLY 5340.0248
GLY 5350.0278
TYR 5360.0345
ASP 5370.0368
GLN 5380.0354
LYS 5390.0385
MET 5400.0323
PRO 5410.0271
VAL 5420.0202
ILE 5430.0158
VAL 5440.0091
SER 5450.0134
ARG 5460.0113
VAL 5470.0096
ALA 5480.0167
PRO 5490.0211
GLY 5500.0253
THR 5510.0205
PRO 5520.0185
ALA 5530.0121
ASP 5540.0153
LEU 5550.0221
CYS 5560.0215
VAL 5570.0250
PRO 5580.0222
ARG 5590.0157
LEU 5600.0092
ASN 5610.0054
GLU 5620.0049
GLY 5630.0107
ASP 5640.0118
GLN 5650.0175
VAL 5660.0170
VAL 5670.0236
LEU 5680.0219
ILE 5690.0160
ASN 5700.0181
GLY 5710.0249
ARG 5720.0244
ARG 5720.0244
ASP 5730.0282
ILE 5740.0256
ALA 5750.0319
GLU 5760.0351
HIS 5770.0292
THR 5780.0287
HIS 5790.0241
ASP 5800.0226
GLN 5810.0204
VAL 5820.0165
VAL 5830.0128
LEU 5840.0117
PHE 5850.0108
ILE 5860.0053
LYS 5870.0046
ALA 5880.0044
SER 5890.0075
CYS 5900.0097
SER 5940.0264
GLY 5950.0196
GLU 5960.0192
LEU 5970.0131
MET 5980.0172
LEU 5990.0155
LEU 6000.0211
VAL 6010.0186
ARG 6020.0215
PRO 6030.0168
PRO 5110.0353
HIS 5120.0386
ASP 5130.0372
ASN 5140.0317
LEU 5150.0276
VAL 5160.0230
LEU 5170.0229
ILE 5180.0174
ARG 5190.0186
MET 5200.0158
LYS 5210.0178
PRO 5220.0154
ASP 5230.0213
GLU 5240.0264
ASN 5250.0232
GLY 5260.0162
ARG 5270.0144
PHE 5280.0104
GLY 5290.0130
PHE 5300.0092
ASN 5310.0137
VAL 5320.0160
LYS 5330.0231
GLY 5340.0277
GLY 5350.0299
TYR 5360.0363
ASP 5370.0391
GLN 5380.0385
LYS 5390.0413
MET 5400.0353
PRO 5410.0298
VAL 5420.0226
ILE 5430.0183
VAL 5440.0116
SER 5450.0160
ARG 5460.0132
VAL 5470.0094
ALA 5480.0161
PRO 5490.0195
GLY 5500.0232
THR 5510.0187
PRO 5520.0162
ALA 5530.0098
ASP 5540.0139
LEU 5550.0202
CYS 5560.0187
VAL 5570.0225
PRO 5580.0196
ARG 5590.0133
LEU 5600.0072
ASN 5610.0045
GLU 5620.0070
GLY 5630.0130
ASP 5640.0135
GLN 5650.0195
VAL 5660.0184
VAL 5670.0245
LEU 5680.0227
ILE 5690.0167
ASN 5700.0181
GLY 5710.0250
ARG 5720.0250
ASP 5730.0292
ILE 5740.0267
ALA 5750.0331
GLU 5760.0363
HIS 5770.0301
THR 5780.0300
HIS 5790.0257
ASP 5800.0232
GLN 5810.0213
VAL 5820.0181
VAL 5830.0142
LEU 5840.0122
PHE 5850.0115
ILE 5860.0063
LYS 5870.0049
ALA 5880.0043
SER 5890.0080
CYS 5900.0114
GLU 5960.0168
LEU 5970.0119
MET 5980.0164
MET 5980.0164
LEU 5990.0152
LEU 6000.0211
VAL 6010.0189
ARG 6020.0225
PRO 6030.0177
ASN 6040.0194
ASP 5130.0173
ASN 5140.0173
LEU 5150.0164
VAL 5160.0160
LEU 5170.0156
ILE 5180.0148
ARG 5190.0143
MET 5200.0135
LYS 5210.0130
PRO 5220.0122
ASP 5230.0118
GLU 5240.0114
ASN 5250.0112
GLY 5260.0116
ARG 5270.0116
PHE 5280.0121
GLY 5290.0121
PHE 5300.0123
ASN 5310.0121
VAL 5320.0122
LYS 5330.0122
GLY 5340.0123
GLY 5350.0123
TYR 5360.0123
ASP 5370.0117
GLN 5380.0119
LYS 5390.0125
MET 5400.0129
PRO 5410.0133
VAL 5420.0130
ILE 5430.0132
VAL 5440.0131
SER 5450.0129
ARG 5460.0128
VAL 5470.0129
ALA 5480.0126
PRO 5490.0130
GLY 5500.0128
THR 5510.0125
PRO 5520.0128
ALA 5530.0131
ASP 5540.0135
LEU 5550.0137
CYS 5560.0141
VAL 5570.0151
PRO 5580.0154
ARG 5590.0146
LEU 5600.0141
ASN 5610.0143
GLU 5620.0139
GLY 5630.0143
ASP 5640.0144
GLN 5650.0142
VAL 5660.0138
VAL 5670.0144
LEU 5680.0143
ILE 5690.0136
ASN 5700.0140
GLY 5710.0148
ARG 5720.0142
ASP 5730.0143
ILE 5740.0134
ALA 5750.0137
GLU 5760.0131
HIS 5770.0126
THR 5780.0119
HIS 5790.0117
ASP 5800.0114
GLN 5810.0119
VAL 5820.0122
VAL 5830.0117
LEU 5840.0118
PHE 5850.0124
ILE 5860.0123
LYS 5870.0119
ALA 5880.0124
SER 5890.0127
CYS 5900.0125
GLU 5910.0130
GLY 5950.0132
GLU 5960.0133
LEU 5970.0133
MET 5980.0141
LEU 5990.0141
LEU 6000.0149
VAL 6010.0148
ARG 6020.0154
PRO 6030.0156
ASN 6040.0156
ILE 120.0139
GLU 130.0141
SER 140.0139
ASP 150.0143
VAL 160.0138
ILE 120.0289
GLU 130.0220
SER 140.0189
ASP 150.0161
VAL 160.0106
ILE 120.0325
GLU 130.0258
SER 140.0210
ASP 150.0170
VAL 160.0109
ILE 120.0116
GLU 130.0117
SER 140.0114
ASP 150.0114
VAL 160.0116

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.