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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN BINDING 10-JUN-10 3NFL  ***

<R2> analysis for 2602021513101103345

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0325
HIS 5120.0141
ASP 5130.0147
ASN 5140.0149
LEU 5150.0135
VAL 5160.0130
LEU 5170.0118
ILE 5180.0116
ARG 5190.0111
MET 5200.0112
LYS 5210.0111
PRO 5220.0112
ASP 5230.0122
GLU 5240.0127
ASN 5250.0121
GLY 5260.0111
ARG 5270.0112
PHE 5280.0114
GLY 5290.0122
PHE 5300.0119
ASN 5310.0116
VAL 5320.0112
LYS 5330.0115
GLY 5340.0116
GLY 5350.0112
TYR 5360.0116
ASP 5370.0113
GLN 5380.0117
LYS 5390.0127
MET 5400.0128
MET 5400.0128
PRO 5410.0126
VAL 5420.0118
ILE 5430.0124
VAL 5440.0124
SER 5450.0129
ARG 5460.0132
VAL 5470.0134
ALA 5480.0138
PRO 5490.0149
GLY 5500.0148
THR 5510.0134
PRO 5520.0126
ALA 5530.0125
ASP 5540.0138
LEU 5550.0139
CYS 5560.0130
VAL 5570.0135
PRO 5580.0134
ARG 5590.0136
LEU 5600.0130
ASN 5610.0139
GLU 5620.0140
GLY 5630.0141
ASP 5640.0134
GLN 5650.0129
VAL 5660.0117
VAL 5670.0118
LEU 5680.0108
ILE 5690.0101
ASN 5700.0097
GLY 5710.0101
ARG 5720.0102
ASP 5730.0110
ILE 5740.0109
ALA 5750.0119
GLU 5760.0118
HIS 5770.0108
THR 5780.0104
HIS 5790.0102
ASP 5800.0096
GLN 5810.0096
VAL 5820.0099
VAL 5830.0096
LEU 5840.0093
PHE 5850.0094
ILE 5860.0096
LYS 5870.0095
ALA 5880.0093
SER 5890.0096
CYS 5900.0095
GLU 5910.0093
ARG 5920.0094
HIS 5930.0094
SER 5940.0098
GLY 5950.0100
GLU 5960.0102
LEU 5970.0100
MET 5980.0102
LEU 5990.0108
LEU 6000.0115
VAL 6010.0124
ARG 6020.0137
PRO 6030.0145
HIS 5120.0278
ASP 5130.0297
ASN 5140.0306
LEU 5150.0295
VAL 5160.0300
LEU 5170.0295
ILE 5180.0294
ARG 5190.0294
MET 5200.0292
LYS 5210.0291
PRO 5220.0280
ASP 5230.0288
GLU 5240.0288
ASN 5250.0269
GLY 5260.0262
ARG 5270.0261
PHE 5280.0269
GLY 5290.0266
PHE 5300.0257
ASN 5310.0239
VAL 5320.0231
LYS 5330.0218
GLY 5340.0211
GLY 5350.0203
TYR 5360.0193
ASP 5370.0178
GLN 5380.0186
LYS 5390.0195
MET 5400.0211
PRO 5410.0225
VAL 5420.0229
ILE 5430.0241
VAL 5440.0250
SER 5450.0243
ARG 5460.0255
VAL 5470.0271
ALA 5480.0276
PRO 5490.0295
GLY 5500.0306
THR 5510.0292
PRO 5520.0295
ALA 5530.0287
ASP 5540.0298
LEU 5550.0315
CYS 5560.0313
VAL 5570.0325
PRO 5580.0319
ARG 5590.0308
LEU 5600.0288
ASN 5610.0286
GLU 5620.0271
GLY 5630.0265
ASP 5640.0269
GLN 5650.0256
VAL 5660.0251
VAL 5670.0252
LEU 5680.0251
ILE 5690.0247
ASN 5700.0255
GLY 5710.0255
ARG 5720.0237
ARG 5720.0237
ASP 5730.0233
ILE 5740.0222
ALA 5750.0221
GLU 5760.0203
HIS 5770.0198
THR 5780.0188
HIS 5790.0196
ASP 5800.0190
GLN 5810.0196
VAL 5820.0213
VAL 5830.0214
LEU 5840.0210
PHE 5850.0222
ILE 5860.0236
LYS 5870.0231
ALA 5880.0230
SER 5890.0247
CYS 5900.0243
SER 5940.0292
GLY 5950.0280
GLU 5960.0283
LEU 5970.0270
MET 5980.0273
LEU 5990.0268
LEU 6000.0273
VAL 6010.0274
ARG 6020.0279
PRO 6030.0289
PRO 5110.0160
HIS 5120.0172
ASP 5130.0183
ASN 5140.0195
LEU 5150.0197
VAL 5160.0211
LEU 5170.0220
ILE 5180.0227
ARG 5190.0240
MET 5200.0247
LYS 5210.0258
PRO 5220.0255
ASP 5230.0266
GLU 5240.0279
ASN 5250.0266
GLY 5260.0255
ARG 5270.0242
PHE 5280.0235
GLY 5290.0229
PHE 5300.0211
ASN 5310.0194
VAL 5320.0180
LYS 5330.0163
GLY 5340.0150
GLY 5350.0147
TYR 5360.0135
ASP 5370.0135
GLN 5380.0133
LYS 5390.0121
MET 5400.0131
PRO 5410.0143
VAL 5420.0159
ILE 5430.0167
VAL 5440.0183
SER 5450.0178
ARG 5460.0195
VAL 5470.0212
ALA 5480.0226
PRO 5490.0241
GLY 5500.0258
THR 5510.0250
PRO 5520.0251
ALA 5530.0234
ASP 5540.0242
LEU 5550.0260
CYS 5560.0253
VAL 5570.0256
PRO 5580.0243
ARG 5590.0236
LEU 5600.0219
ASN 5610.0208
GLU 5620.0194
GLY 5630.0178
ASP 5640.0184
GLN 5650.0171
VAL 5660.0177
VAL 5670.0174
LEU 5680.0185
ILE 5690.0196
ASN 5700.0211
GLY 5710.0201
ARG 5720.0186
ASP 5730.0169
ILE 5740.0163
ALA 5750.0146
GLU 5760.0140
HIS 5770.0153
THR 5780.0154
HIS 5790.0163
ASP 5800.0177
GLN 5810.0177
VAL 5820.0178
VAL 5830.0191
LEU 5840.0200
PHE 5850.0199
ILE 5860.0208
LYS 5870.0220
ALA 5880.0225
SER 5890.0233
CYS 5900.0251
GLU 5960.0251
LEU 5970.0232
MET 5980.0224
MET 5980.0224
LEU 5990.0208
LEU 6000.0199
VAL 6010.0191
ARG 6020.0182
PRO 6030.0189
ASN 6040.0174
ASP 5130.0160
ASN 5140.0166
LEU 5150.0153
VAL 5160.0151
LEU 5170.0142
ILE 5180.0136
ARG 5190.0131
MET 5200.0123
LYS 5210.0117
PRO 5220.0108
ASP 5230.0106
GLU 5240.0101
ASN 5250.0096
GLY 5260.0098
ARG 5270.0101
PHE 5280.0109
GLY 5290.0113
PHE 5300.0118
ASN 5310.0118
VAL 5320.0118
LYS 5330.0124
GLY 5340.0123
GLY 5350.0115
TYR 5360.0113
ASP 5370.0115
GLN 5380.0124
LYS 5390.0129
MET 5400.0132
PRO 5410.0129
VAL 5420.0122
ILE 5430.0131
VAL 5440.0130
SER 5450.0134
ARG 5460.0133
VAL 5470.0131
ALA 5480.0127
PRO 5490.0132
GLY 5500.0129
THR 5510.0121
PRO 5520.0122
ALA 5530.0126
ASP 5540.0135
LEU 5550.0138
CYS 5560.0138
VAL 5570.0151
PRO 5580.0153
ARG 5590.0146
LEU 5600.0138
ASN 5610.0146
GLU 5620.0145
GLY 5630.0149
ASP 5640.0143
GLN 5650.0136
VAL 5660.0125
VAL 5670.0124
LEU 5680.0117
ILE 5690.0111
ASN 5700.0112
GLY 5710.0116
ARG 5720.0108
ASP 5730.0110
ILE 5740.0107
ALA 5750.0113
GLU 5760.0106
HIS 5770.0101
THR 5780.0104
HIS 5790.0107
ASP 5800.0101
GLN 5810.0097
VAL 5820.0101
VAL 5830.0100
LEU 5840.0095
PHE 5850.0097
ILE 5860.0100
LYS 5870.0096
ALA 5880.0097
SER 5890.0103
CYS 5900.0102
GLU 5910.0106
GLY 5950.0112
GLU 5960.0115
LEU 5970.0113
MET 5980.0121
LEU 5990.0122
LEU 6000.0131
VAL 6010.0137
ARG 6020.0147
PRO 6030.0156
ASN 6040.0162
ILE 120.0110
GLU 130.0111
SER 140.0106
ASP 150.0110
VAL 160.0107
ILE 120.0196
GLU 130.0211
SER 140.0215
ASP 150.0232
VAL 160.0240
ILE 120.0160
GLU 130.0171
SER 140.0188
ASP 150.0204
VAL 160.0215
ILE 120.0128
GLU 130.0121
SER 140.0111
ASP 150.0108
VAL 160.0104

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.