CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 01-JUN-10 2KYL  ***

Normal Mode Analysis for ID 2602021513341103391

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.2069
mode 8 1.03 0.1441
mode 9 1.19 0.3847
mode 10 1.31 0.3038
mode 11 1.54 0.5131
mode 12 1.79 0.1369
mode 13 1.92 0.3202
mode 14 2.00 0.3728
mode 15 2.07 0.4033
mode 16 2.14 0.3109
mode 17 2.16 0.3901
mode 18 2.27 0.6166
mode 19 2.35 0.3799
mode 20 2.40 0.0813
mode 21 2.45 0.2165
mode 22 2.48 0.0878
mode 23 2.50 0.0300
mode 24 2.52 0.1663
mode 25 2.52 0.1076
mode 26 2.55 0.0951
mode 27 2.59 0.2553
mode 28 2.62 0.0313
mode 29 2.63 0.0601
mode 30 2.63 0.0292
mode 31 2.66 0.0117
mode 32 2.69 0.0093
mode 33 2.72 0.2169
mode 34 2.73 0.1165
mode 35 2.76 0.0597
mode 36 2.77 0.1198
mode 37 2.78 0.0451
mode 38 2.81 0.1376
mode 39 2.82 0.2531
mode 40 2.86 0.0476
mode 41 2.87 0.3733
mode 42 2.89 0.3929
mode 43 2.91 0.3293
mode 44 2.93 0.5863
mode 45 2.93 0.0307
mode 46 2.97 0.0172
mode 47 2.97 0.0093
mode 48 2.98 0.0093
mode 49 2.99 0.3573
mode 50 3.00 0.0280
mode 51 3.00 0.0178
mode 52 3.02 0.4354
mode 53 3.04 0.0477
mode 54 3.07 0.1248
mode 55 3.08 0.1408
mode 56 3.12 0.5785
mode 57 3.15 0.1734
mode 58 3.17 0.0134
mode 59 3.18 0.0830
mode 60 3.19 0.0236
mode 61 3.20 0.0699
mode 62 3.22 0.1920
mode 63 3.24 0.0509
mode 64 3.25 0.0364
mode 65 3.26 0.0362
mode 66 3.27 0.1528
mode 67 3.27 0.0181
mode 68 3.29 0.0405
mode 69 3.29 0.0124
mode 70 3.29 0.0559
mode 71 3.30 0.2740
mode 72 3.32 0.0287
mode 73 3.32 0.0198
mode 74 3.33 0.1659
mode 75 3.34 0.0135
mode 76 3.35 0.1203
mode 77 3.36 0.0487
mode 78 3.37 0.0905
mode 79 3.37 0.0440
mode 80 3.38 0.1090
mode 81 3.39 0.0970
mode 82 3.40 0.0756
mode 83 3.40 0.1639
mode 84 3.42 0.0927
mode 85 3.43 0.0678
mode 86 3.44 0.0935
mode 87 3.45 0.0570
mode 88 3.46 0.1203
mode 89 3.47 0.0902
mode 90 3.48 0.0812
mode 91 3.49 0.0445
mode 92 3.50 0.1302
mode 93 3.50 0.1037
mode 94 3.52 0.1963
mode 95 3.53 0.1428
mode 96 3.53 0.0403
mode 97 3.54 0.1147
mode 98 3.55 0.1040
mode 99 3.56 0.0364
mode 100 3.57 0.0690
mode 101 3.57 0.0990
mode 102 3.58 0.0401
mode 103 3.58 0.1143
mode 104 3.58 0.1106
mode 105 3.59 0.0514
mode 106 3.60 0.0399

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.