CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***    ***

CA strain for 2602021513361103410

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1GLY 2 -0.0079
GLY 2SER 3 -0.0894
SER 3MET 4 0.0791
MET 4ARG 5 -0.0371
ARG 5PRO 6 0.0333
PRO 6PRO 7 -0.0243
PRO 7ILE 8 0.0553
ILE 8ILE 9 -0.0329
ILE 9ILE 10 0.0348
ILE 10HIS 11 -0.0443
HIS 11ARG 12 -0.0202
ARG 12ALA 13 -0.0017
ALA 13GLY 14 -0.0461
GLY 14LYS 15 0.0294
LYS 15LYS 16 0.0259
LYS 16TYR 17 -0.0273
TYR 17GLY 18 -0.0182
GLY 18PHE 19 0.0155
PHE 19THR 20 0.1252
THR 20LEU 21 -0.0058
LEU 21ARG 22 0.0595
ARG 22ALA 23 0.0614
ALA 23ILE 24 0.0540
ILE 24ARG 25 0.1125
ARG 25VAL 26 -0.0180
VAL 26TYR 27 -0.0653
TYR 27MET 28 0.1419
MET 28GLY 29 -0.1682
GLY 29ASP 30 -0.0492
ASP 30SER 31 -0.0644
SER 31ASP 32 -0.0100
ASP 32VAL 33 -0.0508
VAL 33TYR 34 -0.1121
TYR 34THR 35 -0.3023
THR 35VAL 36 -0.0893
VAL 36HIS 37 0.0067
HIS 37HIS 38 -0.0857
HIS 38MET 39 0.0256
MET 39VAL 40 -0.0205
VAL 40TRP 41 0.0205
TRP 41HIS 42 0.0727
HIS 42VAL 43 0.0825
VAL 43GLU 44 -0.0282
GLU 44ASP 45 0.0208
ASP 45GLY 46 -0.0255
GLY 46GLY 47 -0.0065
GLY 47PRO 48 0.0134
PRO 48ALA 49 -0.0480
ALA 49SER 50 -0.0042
SER 50GLU 51 0.0003
GLU 51ALA 52 -0.0016
ALA 52GLY 53 -0.0420
GLY 53LEU 54 0.0115
LEU 54ARG 55 -0.0736
ARG 55GLN 56 -0.0163
GLN 56GLY 57 -0.0348
GLY 57ASP 58 -0.0038
ASP 58LEU 59 -0.0430
LEU 59ILE 60 0.0443
ILE 60THR 61 -0.0387
THR 61HIS 62 0.0048
HIS 62VAL 63 0.0426
VAL 63ASN 64 -0.0318
ASN 64GLY 65 -0.0289
GLY 65GLU 66 -0.0262
GLU 66PRO 67 -0.0843
PRO 67VAL 68 0.0278
VAL 68HIS 69 -0.1188
HIS 69GLY 70 0.0258
GLY 70LEU 71 -0.0549
LEU 71VAL 72 -0.0568
VAL 72HIS 73 -0.0414
HIS 73THR 74 0.0530
THR 74GLU 75 -0.0314
GLU 75VAL 76 0.0041
VAL 76VAL 77 -0.0131
VAL 77GLU 78 -0.0275
GLU 78LEU 79 0.0331
LEU 79ILE 80 -0.0231
ILE 80LEU 81 -0.0023
LEU 81LYS 82 -0.0243
LYS 82SER 83 0.0313
SER 83GLY 84 -0.0399
GLY 84ASN 85 -0.0028
ASN 85LYS 86 -0.0152
LYS 86VAL 87 -0.0399
VAL 87ALA 88 0.0151
ALA 88ILE 89 -0.0116
ILE 89SER 90 0.0341
SER 90THR 91 0.0421
THR 91THR 92 0.0343
THR 92PRO 93 0.0360
PRO 93LEU 94 -0.0884
LEU 94GLU 95 -0.1187
GLU 95ASN 96 -0.1140
ASN 96SER 101 0.4182
SER 101TRP 102 0.1954
TRP 102GLU 103 -0.0279
GLU 103SER 104 0.1314
SER 104HIS 105 0.0883
HIS 105LYS 106 -0.0665
LYS 106SER 107 -0.0266
SER 107GLY 108 0.1426
GLY 108GLY 109 -0.0550
GLY 109GLU 110 0.1366
GLU 110THR 111 0.0051
THR 111ARG 112 0.1344
ARG 112LEU 113 0.1251

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.