CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN/PEPTIDE BINDING PROTEI04-NOV-09 XXXX  ***

CA strain for 2602021514001103477

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1GLY 2 -0.1781
GLY 2SER 3 0.2767
SER 3MET 4 -0.1551
MET 4ARG 5 0.0736
ARG 5PRO 6 -0.2063
PRO 6PRO 7 -0.2212
PRO 7ILE 8 -0.0777
ILE 8ILE 9 -0.0386
ILE 9ILE 10 -0.0528
ILE 10HIS 11 -0.0466
HIS 11ARG 12 -0.0433
ARG 12ALA 13 0.0152
ALA 13GLY 14 -0.0117
GLY 14LYS 15 -0.0036
LYS 15LYS 16 0.0097
LYS 16TYR 17 -0.0323
TYR 17GLY 18 0.0152
GLY 18PHE 19 0.0019
PHE 19THR 20 0.0153
THR 20LEU 21 -0.0047
LEU 21ARG 22 -0.0116
ARG 22ALA 23 0.0105
ALA 23ILE 24 -0.0147
ILE 24ARG 25 0.0232
ARG 25VAL 26 -0.0003
VAL 26TYR 27 0.0924
TYR 27MET 28 -0.0316
MET 28GLY 29 0.0780
GLY 29ASP 30 0.0873
ASP 30SER 31 -0.1034
SER 31ASP 32 -0.0152
ASP 32VAL 33 -0.0705
VAL 33TYR 34 -0.0947
TYR 34THR 35 -0.1768
THR 35VAL 36 0.0232
VAL 36HIS 37 -0.0626
HIS 37HIS 38 -0.1078
HIS 38MET 39 -0.0615
MET 39VAL 40 -0.0544
VAL 40TRP 41 0.0666
TRP 41HIS 42 -0.0199
HIS 42VAL 43 0.0118
VAL 43GLU 44 -0.0135
GLU 44ASP 45 0.0207
ASP 45GLY 46 -0.0121
GLY 46GLY 47 0.0067
GLY 47PRO 48 0.0184
PRO 48ALA 49 -0.0466
ALA 49SER 50 0.0126
SER 50GLU 51 -0.0050
GLU 51ALA 52 -0.0101
ALA 52GLY 53 0.0075
GLY 53LEU 54 0.0069
LEU 54ARG 55 0.0190
ARG 55GLN 56 -0.0023
GLN 56GLY 57 -0.0407
GLY 57ASP 58 0.1050
ASP 58LEU 59 -0.1831
LEU 59ILE 60 -0.0149
ILE 60THR 61 0.0803
THR 61HIS 62 0.0536
HIS 62VAL 63 0.0072
VAL 63ASN 64 0.0019
ASN 64GLY 65 0.0205
GLY 65GLU 66 -0.0371
GLU 66PRO 67 0.0132
PRO 67VAL 68 -0.0076
VAL 68HIS 69 0.0350
HIS 69GLY 70 -0.0215
GLY 70LEU 71 0.0455
LEU 71VAL 72 -0.0719
VAL 72HIS 73 0.0077
HIS 73THR 74 -0.0194
THR 74GLU 75 -0.0333
GLU 75VAL 76 0.0047
VAL 76VAL 77 0.0257
VAL 77GLU 78 -0.0141
GLU 78LEU 79 -0.0260
LEU 79ILE 80 0.0337
ILE 80LEU 81 -0.0084
LEU 81LYS 82 0.0178
LYS 82SER 83 -0.0210
SER 83GLY 84 0.0154
GLY 84ASN 85 0.0369
ASN 85LYS 86 -0.0356
LYS 86VAL 87 -0.0170
VAL 87ALA 88 -0.0989
ALA 88ILE 89 0.0381
ILE 89SER 90 -0.0829
SER 90THR 91 -0.0234
THR 91THR 92 -0.1011
THR 92PRO 93 0.0736
PRO 93LEU 94 0.0674
LEU 94GLU 95 -0.2946
GLU 95ASN 96 0.0677
ASN 96SER 101 -0.5711
SER 101TRP 102 -0.0396
TRP 102GLU 103 -0.0026
GLU 103SER 104 -0.0164
SER 104HIS 105 0.0376
HIS 105LYS 106 0.0325
LYS 106SER 107 0.0070
SER 107GLY 108 -0.0015
GLY 108GLY 109 0.0352
GLY 109GLU 110 0.0627
GLU 110THR 111 -0.0726
THR 111ARG 112 0.0554
ARG 112LEU 113 -0.0232

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.