CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN/PEPTIDE BINDING PROTEI04-NOV-09 XXXX  ***

CA distance fluctuations for 2602021514001103477

---  normal mode 8  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
MET 28 0.38 GLY 1 -0.37 GLY 57
MET 28 0.32 GLY 2 -0.25 GLY 57
GLY 65 0.28 SER 3 -0.20 GLY 57
GLY 65 0.31 MET 4 -0.13 THR 92
MET 28 0.23 ARG 5 -0.08 GLY 57
MET 28 0.23 PRO 6 -0.04 TRP 41
MET 28 0.18 PRO 7 -0.04 ASP 32
GLY 29 0.20 ILE 8 -0.05 LEU 94
GLY 29 0.15 ILE 9 -0.08 ASP 32
SER 101 0.16 ILE 10 -0.08 ASP 32
SER 101 0.13 HIS 11 -0.11 ASP 32
SER 101 0.12 ARG 12 -0.14 ASP 32
SER 101 0.13 ALA 13 -0.11 ASP 32
SER 101 0.10 GLY 14 -0.15 ASP 32
SER 101 0.11 LYS 15 -0.14 ASN 96
SER 101 0.13 LYS 16 -0.16 ASN 96
SER 101 0.16 TYR 17 -0.16 ASN 96
SER 101 0.20 GLY 18 -0.23 ASN 96
SER 101 0.23 PHE 19 -0.28 ASN 96
SER 101 0.22 THR 20 -0.34 ASN 96
SER 101 0.18 LEU 21 -0.29 ASN 96
SER 101 0.20 ARG 22 -0.38 ASN 96
SER 101 0.09 ALA 23 -0.29 ASN 96
GLY 57 0.12 ILE 24 -0.30 ASN 96
LEU 94 0.21 ARG 25 -0.17 VAL 72
LEU 94 0.35 VAL 26 -0.14 SER 101
LEU 94 0.45 TYR 27 -0.21 LEU 71
LEU 94 0.65 MET 28 -0.18 GLY 70
LEU 94 0.61 GLY 29 -0.18 VAL 72
LEU 94 0.53 ASP 30 -0.25 VAL 72
LEU 94 0.47 SER 31 -0.31 LEU 71
LEU 94 0.37 ASP 32 -0.42 LEU 71
LEU 94 0.42 VAL 33 -0.42 GLY 70
LEU 94 0.40 TYR 34 -0.34 GLY 70
LEU 94 0.32 THR 35 -0.25 GLY 70
LEU 94 0.20 VAL 36 -0.20 LEU 71
LEU 94 0.16 HIS 37 -0.17 ASN 96
SER 101 0.18 HIS 38 -0.26 ASN 96
SER 101 0.34 MET 39 -0.38 ASN 96
SER 101 0.35 VAL 40 -0.39 ASN 96
SER 101 0.35 TRP 41 -0.51 ASN 96
SER 101 0.34 HIS 42 -0.44 ASN 96
SER 101 0.30 VAL 43 -0.34 ASN 96
SER 101 0.27 GLU 44 -0.31 ASN 96
GLY 29 0.30 ASP 45 -0.28 ASN 96
GLY 29 0.25 GLY 46 -0.23 ASN 96
GLY 29 0.21 GLY 47 -0.16 ASN 96
SER 101 0.20 PRO 48 -0.15 ASN 96
SER 101 0.23 ALA 49 -0.16 ASN 96
GLY 29 0.29 SER 50 -0.21 ASN 96
GLY 29 0.27 GLU 51 -0.14 LEU 94
GLY 29 0.24 ALA 52 -0.11 LEU 94
GLY 29 0.30 GLY 53 -0.16 LEU 94
GLY 29 0.31 LEU 54 -0.18 ASN 96
GLY 29 0.42 ARG 55 -0.29 ASN 96
GLY 29 0.43 GLN 56 -0.45 ASN 96
SER 101 0.52 GLY 57 -0.59 ASN 96
MET 28 0.45 ASP 58 -0.41 ASN 96
MET 28 0.38 LEU 59 -0.30 ASN 96
MET 28 0.24 ILE 60 -0.15 ASN 96
MET 28 0.17 THR 61 -0.05 TRP 41
SER 3 0.16 HIS 62 -0.13 ASP 32
MET 4 0.19 VAL 63 -0.19 ASP 32
MET 4 0.24 ASN 64 -0.21 ASP 32
MET 4 0.31 GLY 65 -0.21 ASP 32
SER 3 0.25 GLU 66 -0.28 ASP 32
SER 3 0.22 PRO 67 -0.24 VAL 33
SER 3 0.13 VAL 68 -0.24 ASP 32
LEU 94 0.16 HIS 69 -0.24 VAL 33
LEU 94 0.16 GLY 70 -0.42 VAL 33
SER 3 0.12 LEU 71 -0.42 ASP 32
HIS 69 0.10 VAL 72 -0.41 ASP 32
VAL 68 0.06 HIS 73 -0.28 ASP 32
MET 4 0.08 THR 74 -0.34 ASP 32
MET 4 0.11 GLU 75 -0.41 ASP 32
MET 4 0.10 VAL 76 -0.29 ASP 32
MET 4 0.09 VAL 77 -0.26 ASP 32
MET 4 0.12 GLU 78 -0.35 ASP 32
MET 4 0.14 LEU 79 -0.33 ASP 32
MET 4 0.13 ILE 80 -0.25 ASP 32
MET 4 0.12 LEU 81 -0.28 ASP 32
MET 4 0.15 LYS 82 -0.33 ASP 32
MET 4 0.16 SER 83 -0.28 ASP 32
MET 4 0.14 GLY 84 -0.25 ASP 32
MET 4 0.11 ASN 85 -0.20 ASP 32
MET 4 0.12 LYS 86 -0.17 ASP 32
MET 4 0.15 VAL 87 -0.17 ASP 32
MET 4 0.18 ALA 88 -0.13 ASP 32
MET 28 0.14 ILE 89 -0.09 ASP 32
MET 28 0.18 SER 90 -0.03 ASP 32
MET 28 0.30 THR 91 -0.09 GLY 1
MET 28 0.42 THR 92 -0.18 SER 3
MET 28 0.49 PRO 93 -0.19 SER 3
MET 28 0.65 LEU 94 -0.23 GLN 56
MET 28 0.49 GLU 95 -0.44 GLY 57
SER 31 0.28 ASN 96 -0.59 GLY 57
GLY 57 0.52 SER 101 -0.14 VAL 26
ASP 30 0.30 TRP 102 -0.37 ASN 96
GLY 57 0.15 GLU 103 -0.30 ASN 96
GLY 70 0.08 SER 104 -0.29 ASN 96
ASP 30 0.09 HIS 105 -0.41 ASN 96
GLY 70 0.08 LYS 106 -0.37 ASN 96
GLY 70 0.13 SER 107 -0.26 ASN 96
GLY 70 0.10 GLY 108 -0.25 ASN 96
GLU 75 0.07 GLY 109 -0.32 ASN 96
THR 111 0.09 GLU 110 -0.36 ASN 96
GLU 110 0.09 THR 111 -0.28 ASN 96
SER 101 0.13 ARG 112 -0.28 ASN 96
SER 101 0.13 LEU 113 -0.21 ASN 96

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.