Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* IMMUNE SYSTEM 03-JUL-23 8JYQ *

<R²> analysis for 2602022316101172576

--- normal mode 56 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0813
GLN 1 0.0739
VAL 2 0.0505
THR 3 0.0441
LEU 4 0.0300
LYS 5 0.0276
GLU 6 0.0265
SER 7 0.0311
GLY 8 0.0330
PRO 9 0.0273
GLY 10 0.0247
ILE 11 0.0209
LEU 12 0.0202
GLN 13 0.0207
PRO 14 0.0201
SER 15 0.0203
GLN 16 0.0218
THR 17 0.0254
LEU 18 0.0252
SER 19 0.0263
LEU 20 0.0250
THR 21 0.0271
CYS 22 0.0221
SER 23 0.0232
PHE 24 0.0216
SER 25 0.0314
GLY 26 0.0389
PHE 27 0.0315
SER 28 0.0223
LEU 29 0.0135
SER 30 0.0189
THR 31 0.0250
SER 31 0.0280
GLY 31 0.0243
MET 32 0.0180
GLY 33 0.0100
VAL 34 0.0052
SER 35 0.0047
TRP 36 0.0080
ILE 37 0.0080
ARG 38 0.0150
GLN 39 0.0230
PRO 40 0.0265
SER 41 0.0599
GLY 42 0.0813
LYS 43 0.0625
GLY 44 0.0472
LEU 45 0.0132
GLU 46 0.0103
TRP 47 0.0063
LEU 48 0.0038
ALA 49 0.0035
HIS 50 0.0044
ILE 51 0.0068
PHE 52 0.0105
TRP 53 0.0132
ASP 54 0.0173
ASP 55 0.0141
ASP 56 0.0168
LYS 57 0.0111
ARG 58 0.0098
TYR 59 0.0072
ASN 60 0.0059
PRO 61 0.0122
SER 62 0.0107
LEU 63 0.0055
LYS 64 0.0083
SER 65 0.0118
ARG 66 0.0106
LEU 67 0.0106
THR 68 0.0154
ILE 69 0.0128
SER 70 0.0127
LYS 71 0.0082
ASP 72 0.0086
THR 73 0.0024
SER 74 0.0011
ARG 75 0.0076
ASN 76 0.0073
LYS 77 0.0142
VAL 78 0.0104
PHE 79 0.0166
LEU 80 0.0173
LYS 81 0.0223
ILE 82 0.0183
THR 82 0.0181
SER 82 0.0168
VAL 82 0.0181
ASP 83 0.0178
THR 84 0.0214
ALA 85 0.0175
ASP 86 0.0187
THR 87 0.0256
ALA 88 0.0283
THR 89 0.0238
TYR 90 0.0189
TYR 91 0.0156
CYS 92 0.0112
ALA 93 0.0074
ARG 94 0.0091
ARG 95 0.0108
VAL 96 0.0163
VAL 97 0.0101
ALA 98 0.0093
THR 99 0.0073
ASP 100 0.0066
TRP 100 0.0045
TYR 100 0.0062
PHE 100 0.0073
ASP 101 0.0120
VAL 102 0.0097
TRP 103 0.0086
GLY 104 0.0120
ALA 105 0.0161
GLY 106 0.0191
THR 107 0.0219
THR 108 0.0273
THR 108 0.0273
VAL 109 0.0263
THR 110 0.0231
VAL 111 0.0209
CYS 112 0.0192
SER 113 0.0183
GLY 114 0.0199
SER 115 0.0182
ASP 116 0.0196
TYR 117 0.0186
GLU 118 0.0146
PHE 119 0.0116
LEU 120 0.0112
LYS 121 0.0039
SER 122 0.0030
TRP 123 0.0091
THR 124 0.0132
VAL 125 0.0149
GLU 126 0.0152
ASP 127 0.0144
LEU 128 0.0148
GLN 129 0.0104
LYS 130 0.0078
ARG 131 0.0117
LEU 132 0.0115
LEU 133 0.0099
ALA 134 0.0159
LEU 135 0.0170
ASP 136 0.0144
PRO 137 0.0229
MET 138 0.0239
MET 139 0.0206
GLU 140 0.0198
GLN 141 0.0226
GLU 142 0.0209
ILE 143 0.0205
GLU 144 0.0206
GLU 145 0.0183
ILE 146 0.0175
ARG 147 0.0212
GLN 148 0.0209
LYS 149 0.0173
TYR 150 0.0153
GLN 151 0.0188
SER 152 0.0182
LYS 153 0.0112
ARG 154 0.0081
GLN 155 0.0080
PRO 156 0.0103
ILE 157 0.0102
LEU 158 0.0126
ASP 159 0.0183
ALA 160 0.0212
ILE 161 0.0196
ARG 0 0.0301
ASP 1 0.0230
ILE 2 0.0139
VAL 3 0.0227
LEU 4 0.0174
THR 5 0.0204
GLN 6 0.0181
SER 7 0.0206
PRO 8 0.0140
ALA 9 0.0185
SER 10 0.0174
LEU 11 0.0145
ALA 12 0.0198
VAL 13 0.0148
SER 14 0.0164
LEU 15 0.0135
GLY 16 0.0103
GLN 17 0.0088
ARG 18 0.0023
ALA 19 0.0074
THR 20 0.0139
ILE 21 0.0156
SER 22 0.0175
CYS 23 0.0198
ARG 24 0.0253
ALA 25 0.0186
SER 26 0.0182
GLU 27 0.0119
SER 28 0.0118
VAL 29 0.0118
GLU 30 0.0129
TYR 30 0.0128
TYR 30 0.0156
GLY 30 0.0173
THR 30 0.0154
THR 31 0.0144
LEU 32 0.0110
MET 33 0.0116
GLN 34 0.0119
TRP 35 0.0133
TYR 36 0.0080
GLN 37 0.0092
GLN 38 0.0094
LYS 39 0.0112
PRO 40 0.0043
GLY 41 0.0092
GLN 42 0.0091
GLN 42 0.0091
PRO 43 0.0087
PRO 44 0.0097
LYS 45 0.0111
LEU 46 0.0100
LEU 47 0.0103
ILE 48 0.0167
TYR 49 0.0153
ALA 50 0.0149
ALA 51 0.0153
SER 52 0.0209
LYS 53 0.0213
VAL 54 0.0223
GLU 55 0.0216
SER 56 0.0372
GLY 57 0.0356
VAL 58 0.0259
PRO 59 0.0224
ALA 60 0.0181
ARG 61 0.0146
PHE 62 0.0169
SER 63 0.0179
GLY 64 0.0207
SER 65 0.0213
GLY 66 0.0217
SER 67 0.0208
GLY 68 0.0172
THR 69 0.0199
ASP 70 0.0229
PHE 71 0.0218
SER 72 0.0197
LEU 73 0.0181
ASN 74 0.0146
ILE 75 0.0122
HIS 76 0.0064
PRO 77 0.0026
VAL 78 0.0056
GLU 79 0.0091
GLU 80 0.0102
ASP 81 0.0126
ASP 82 0.0139
VAL 83 0.0174
ALA 84 0.0160
MET 85 0.0139
TYR 86 0.0129
PHE 87 0.0112
CYS 88 0.0105
GLN 89 0.0087
GLN 90 0.0078
SER 91 0.0071
ARG 92 0.0101
LYS 93 0.0095
VAL 94 0.0094
PRO 95 0.0102
LEU 96 0.0046
THR 97 0.0050
PHE 98 0.0044
GLY 99 0.0050
ALA 100 0.0119
GLY 101 0.0139
THR 102 0.0138
LYS 103 0.0166
LEU 104 0.0199
GLU 105 0.0219
LEU 106 0.0196
LYS 107 0.0257
TRP 118 0.0339
THR 119 0.0258
VAL 120 0.0142
GLU 121 0.0128
ASP 122 0.0074
LEU 123 0.0085
GLN 124 0.0038
LYS 125 0.0035
ARG 126 0.0058
LEU 127 0.0041
LEU 128 0.0051
ALA 129 0.0058
LEU 130 0.0062
ASP 131 0.0083
PRO 132 0.0096
MET 133 0.0088
MET 134 0.0127
GLU 135 0.0165
GLN 136 0.0156
GLU 137 0.0140
ILE 138 0.0136
GLU 139 0.0168
GLU 140 0.0158
GLU 140 0.0158
ILE 141 0.0155
ARG 142 0.0122
GLN 143 0.0138
LYS 144 0.0128
TYR 145 0.0149
GLN 146 0.0077
CYS 147 0.0103
LYS 148 0.0111
ARG 149 0.0098
GLN 150 0.0136
PRO 151 0.0138
ILE 152 0.0113
LEU 153 0.0122
ASP 154 0.0235
ALA 155 0.0141
ILE 156 0.0181
GLU 157 0.0264
ALA 158 0.0199
LYS 159 0.0202
MET 611 0.0106
PRO 612 0.0125
ILE 613 0.0083
TRP 614 0.0139
LYS 615 0.0117
PHE 616 0.0065
PRO 617 0.0064
ASP 618 0.0042
GLN 1 0.0147
VAL 2 0.0104
THR 3 0.0092
LEU 4 0.0057
LYS 5 0.0045
GLU 6 0.0034
SER 7 0.0037
GLY 8 0.0035
PRO 9 0.0024
GLY 10 0.0020
ILE 11 0.0024
LEU 12 0.0029
GLN 13 0.0054
PRO 14 0.0036
SER 15 0.0038
GLN 16 0.0051
THR 17 0.0048
LEU 18 0.0034
SER 19 0.0036
LEU 20 0.0027
THR 21 0.0043
CYS 22 0.0047
SER 23 0.0064
PHE 24 0.0074
SER 25 0.0100
GLY 26 0.0115
PHE 27 0.0091
SER 28 0.0065
LEU 29 0.0041
SER 30 0.0042
THR 31 0.0060
SER 31 0.0067
GLY 31 0.0072
MET 32 0.0060
GLY 33 0.0042
VAL 34 0.0035
SER 35 0.0033
TRP 36 0.0023
ILE 37 0.0026
ARG 38 0.0028
GLN 39 0.0031
PRO 40 0.0033
SER 41 0.0061
GLY 42 0.0049
LYS 43 0.0034
GLY 44 0.0021
LEU 45 0.0023
GLU 46 0.0024
TRP 47 0.0028
LEU 48 0.0032
ALA 49 0.0027
HIS 50 0.0033
ILE 51 0.0031
PHE 52 0.0040
TRP 53 0.0046
ASP 54 0.0046
ASP 55 0.0035
ASP 56 0.0046
LYS 57 0.0032
ARG 58 0.0039
TYR 59 0.0035
ASN 60 0.0038
PRO 61 0.0055
SER 62 0.0051
LEU 63 0.0041
LYS 64 0.0046
SER 65 0.0061
ARG 66 0.0042
LEU 67 0.0032
THR 68 0.0033
ILE 69 0.0019
SER 70 0.0020
LYS 71 0.0031
ASP 72 0.0052
THR 73 0.0070
SER 74 0.0083
ARG 75 0.0091
ASN 76 0.0087
LYS 77 0.0060
VAL 78 0.0038
PHE 79 0.0029
LEU 80 0.0019
LYS 81 0.0036
ILE 82 0.0027
THR 82 0.0042
SER 82 0.0040
VAL 82 0.0020
ASP 83 0.0017
THR 84 0.0031
ALA 85 0.0031
ASP 86 0.0025
THR 87 0.0032
ALA 88 0.0034
THR 89 0.0031
TYR 90 0.0027
TYR 91 0.0030
CYS 92 0.0028
ALA 93 0.0037
ARG 94 0.0035
ARG 95 0.0039
VAL 96 0.0038
VAL 97 0.0028
ALA 98 0.0024
THR 99 0.0024
ASP 100 0.0022
TRP 100 0.0018
TYR 100 0.0019
PHE 100 0.0026
ASP 101 0.0043
VAL 102 0.0037
VAL 102 0.0037
TRP 103 0.0032
GLY 104 0.0030
ALA 105 0.0045
GLY 106 0.0037
THR 107 0.0033
THR 108 0.0035
VAL 109 0.0023
THR 110 0.0030
VAL 111 0.0030
CYS 112 0.0041
SER 113 0.0095
GLY 114 0.0106
SER 115 0.0092
ASP 116 0.0111
TYR 117 0.0082
GLU 118 0.0109
PHE 119 0.0094
LEU 120 0.0054
LYS 121 0.0060
SER 122 0.0046
TRP 123 0.0059
THR 124 0.0105
VAL 125 0.0099
GLU 126 0.0108
ASP 127 0.0086
LEU 128 0.0048
GLN 129 0.0036
LYS 130 0.0041
ARG 131 0.0023
LEU 132 0.0004
LEU 133 0.0017
ALA 134 0.0020
LEU 135 0.0018
ASP 136 0.0021
PRO 137 0.0015
MET 138 0.0020
MET 139 0.0021
GLU 140 0.0016
GLN 141 0.0022
GLU 142 0.0028
ILE 143 0.0027
GLU 144 0.0021
GLU 145 0.0028
ILE 146 0.0034
ARG 147 0.0030
GLN 148 0.0025
LYS 149 0.0026
TYR 150 0.0029
GLN 151 0.0040
SER 152 0.0037
LYS 153 0.0025
ARG 154 0.0036
GLN 155 0.0057
PRO 156 0.0053
ILE 157 0.0036
LEU 158 0.0041
ASP 159 0.0043
ALA 160 0.0028
ILE 161 0.0036
GLU 162 0.0180
ALA 163 0.0256
ARG 0 0.0084
ASP 1 0.0071
ILE 2 0.0052
VAL 3 0.0062
LEU 4 0.0059
THR 5 0.0072
GLN 6 0.0067
SER 7 0.0078
PRO 8 0.0085
ALA 9 0.0094
SER 10 0.0076
LEU 11 0.0051
ALA 12 0.0039
VAL 13 0.0005
SER 14 0.0045
LEU 15 0.0081
GLY 16 0.0115
GLN 17 0.0082
ARG 18 0.0067
ALA 19 0.0030
THR 20 0.0040
ILE 21 0.0046
SER 22 0.0062
CYS 23 0.0068
ARG 24 0.0076
ALA 25 0.0061
SER 26 0.0060
GLU 27 0.0047
SER 28 0.0043
VAL 29 0.0042
GLU 30 0.0048
TYR 30 0.0061
TYR 30 0.0079
GLY 30 0.0078
THR 30 0.0058
THR 31 0.0046
LEU 32 0.0032
MET 33 0.0034
GLN 34 0.0035
TRP 35 0.0039
TYR 36 0.0025
GLN 37 0.0025
GLN 38 0.0025
LYS 39 0.0028
PRO 40 0.0038
GLY 41 0.0046
GLN 42 0.0040
PRO 43 0.0042
PRO 44 0.0011
LYS 45 0.0021
LEU 46 0.0029
LEU 47 0.0038
ILE 48 0.0047
TYR 49 0.0051
ALA 50 0.0055
ALA 51 0.0052
SER 52 0.0062
LYS 53 0.0067
VAL 54 0.0062
GLU 55 0.0064
SER 56 0.0116
SER 56 0.0116
GLY 57 0.0095
VAL 58 0.0058
PRO 59 0.0050
ALA 60 0.0057
ARG 61 0.0053
PHE 62 0.0021
SER 63 0.0016
GLY 64 0.0048
SER 65 0.0046
GLY 66 0.0045
SER 67 0.0040
GLY 68 0.0040
THR 69 0.0054
ASP 70 0.0060
PHE 71 0.0057
SER 72 0.0059
LEU 73 0.0032
ASN 74 0.0019
ILE 75 0.0015
HIS 76 0.0061
PRO 77 0.0084
VAL 78 0.0057
GLU 79 0.0100
GLU 80 0.0084
ASP 81 0.0093
ASP 82 0.0077
VAL 83 0.0078
ALA 84 0.0045
MET 85 0.0043
TYR 86 0.0034
PHE 87 0.0035
CYS 88 0.0040
GLN 89 0.0034
GLN 90 0.0025
SER 91 0.0021
SER 91 0.0021
ARG 92 0.0033
LYS 93 0.0035
VAL 94 0.0036
PRO 95 0.0040
LEU 96 0.0021
THR 97 0.0022
PHE 98 0.0028
GLY 99 0.0032
ALA 100 0.0061
GLY 101 0.0055
THR 102 0.0054
LYS 103 0.0064
LEU 104 0.0060
GLU 105 0.0062
LEU 106 0.0054
LYS 107 0.0038
ARG 108 0.0098
TYR 112 0.0064
GLU 113 0.0098
PHE 114 0.0092
LEU 115 0.0055
LYS 116 0.0097
SER 117 0.0122
TRP 118 0.0086
THR 119 0.0085
VAL 120 0.0063
GLU 121 0.0039
ASP 122 0.0017
LEU 123 0.0017
GLN 124 0.0037
LYS 125 0.0034
ARG 126 0.0031
LEU 127 0.0044
LEU 128 0.0079
ALA 129 0.0079
LEU 130 0.0057
ASP 131 0.0073
PRO 132 0.0069
MET 133 0.0061
MET 134 0.0048
GLU 135 0.0058
GLN 136 0.0057
GLU 137 0.0053
ILE 138 0.0042
GLU 139 0.0043
GLU 140 0.0047
ILE 141 0.0033
ARG 142 0.0032
GLN 143 0.0042
LYS 144 0.0031
TYR 145 0.0016
GLN 146 0.0014
CYS 147 0.0011
LYS 148 0.0012
ARG 149 0.0018
GLN 150 0.0027
PRO 151 0.0031
ILE 152 0.0038
LEU 153 0.0045
ASP 154 0.0048
ALA 155 0.0050
ILE 156 0.0061
GLU 157 0.0058
ALA 158 0.0067
LYS 159 0.0064
GLY 160 0.0084
THR 161 0.0109
LEU 162 0.0184
PRO 612 0.0031
ILE 613 0.0022
TRP 614 0.0040
LYS 615 0.0034
PHE 616 0.0027
PRO 617 0.0034
ASP 618 0.0057

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.

Should you encounter any unexpected behaviour, please let us know. elNémo has been hacked on november 27th. It has been moved away and runs again. **Still some additional cleaning from time to time** Sorry for the inconvenience.

*** IMMUNE SYSTEM 03-JUL-23 8JYQ ***

<R2> analysis for 2602022316101172576

--- normal mode 56 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* IMMUNE SYSTEM 03-JUL-23 8JYQ *

<R²> analysis for 2602022316101172576