Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* IMMUNE SYSTEM 03-JUL-23 8JYQ *

<R²> analysis for 2602022316101172576

--- normal mode 80 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.1152
GLN 1 0.0811
VAL 2 0.0451
THR 3 0.0322
LEU 4 0.0155
LYS 5 0.0193
GLU 6 0.0195
SER 7 0.0223
GLY 8 0.0232
PRO 9 0.0180
GLY 10 0.0223
ILE 11 0.0215
LEU 12 0.0180
GLN 13 0.0173
PRO 14 0.0233
SER 15 0.0222
GLN 16 0.0106
THR 17 0.0084
LEU 18 0.0048
SER 19 0.0156
LEU 20 0.0205
THR 21 0.0233
CYS 22 0.0156
SER 23 0.0098
PHE 24 0.0061
SER 25 0.0305
GLY 26 0.0387
PHE 27 0.0299
SER 28 0.0305
LEU 29 0.0114
SER 30 0.0185
THR 31 0.0157
SER 31 0.0145
GLY 31 0.0086
MET 32 0.0049
GLY 33 0.0083
VAL 34 0.0100
SER 35 0.0113
TRP 36 0.0134
ILE 37 0.0139
ARG 38 0.0131
GLN 39 0.0135
PRO 40 0.0129
SER 41 0.0360
GLY 42 0.0701
LYS 43 0.0551
GLY 44 0.0348
LEU 45 0.0128
GLU 46 0.0103
TRP 47 0.0099
LEU 48 0.0099
ALA 49 0.0111
HIS 50 0.0099
ILE 51 0.0092
PHE 52 0.0091
TRP 53 0.0100
ASP 54 0.0111
ASP 55 0.0085
ASP 56 0.0100
LYS 57 0.0086
ARG 58 0.0073
TYR 59 0.0074
ASN 60 0.0085
PRO 61 0.0156
SER 62 0.0178
LEU 63 0.0168
LYS 64 0.0169
SER 65 0.0278
ARG 66 0.0201
LEU 67 0.0130
THR 68 0.0185
ILE 69 0.0151
SER 70 0.0118
LYS 71 0.0076
ASP 72 0.0059
THR 73 0.0079
SER 74 0.0092
ARG 75 0.0073
ASN 76 0.0059
LYS 77 0.0114
VAL 78 0.0111
PHE 79 0.0146
LEU 80 0.0158
LYS 81 0.0144
ILE 82 0.0077
THR 82 0.0172
SER 82 0.0218
VAL 82 0.0191
ASP 83 0.0312
THR 84 0.0403
ALA 85 0.0251
ASP 86 0.0210
THR 87 0.0257
ALA 88 0.0228
THR 89 0.0168
TYR 90 0.0142
TYR 91 0.0158
CYS 92 0.0163
ALA 93 0.0088
ARG 94 0.0055
ARG 95 0.0075
VAL 96 0.0038
VAL 97 0.0081
ALA 98 0.0089
THR 99 0.0106
ASP 100 0.0105
TRP 100 0.0097
TYR 100 0.0087
PHE 100 0.0074
ASP 101 0.0090
VAL 102 0.0094
TRP 103 0.0094
GLY 104 0.0126
ALA 105 0.0250
GLY 106 0.0218
THR 107 0.0202
THR 108 0.0203
THR 108 0.0203
VAL 109 0.0214
THR 110 0.0232
VAL 111 0.0211
CYS 112 0.0245
SER 113 0.0233
GLY 114 0.0211
SER 115 0.0145
ASP 116 0.0079
TYR 117 0.0166
GLU 118 0.0179
PHE 119 0.0122
LEU 120 0.0109
LYS 121 0.0123
SER 122 0.0138
TRP 123 0.0124
THR 124 0.0105
VAL 125 0.0030
GLU 126 0.0054
ASP 127 0.0101
LEU 128 0.0095
GLN 129 0.0131
LYS 130 0.0162
ARG 131 0.0139
LEU 132 0.0100
LEU 133 0.0130
ALA 134 0.0081
LEU 135 0.0088
ASP 136 0.0154
PRO 137 0.0306
MET 138 0.0162
MET 139 0.0062
GLU 140 0.0189
GLN 141 0.0200
GLU 142 0.0164
ILE 143 0.0128
GLU 144 0.0052
GLU 145 0.0183
ILE 146 0.0204
ARG 147 0.0093
GLN 148 0.0114
LYS 149 0.0038
TYR 150 0.0066
GLN 151 0.0086
SER 152 0.0067
LYS 153 0.0093
ARG 154 0.0073
GLN 155 0.0054
PRO 156 0.0103
ILE 157 0.0122
LEU 158 0.0084
ASP 159 0.0208
ALA 160 0.0199
ILE 161 0.0120
ARG 0 0.0283
ASP 1 0.0206
ILE 2 0.0142
VAL 3 0.0155
LEU 4 0.0068
THR 5 0.0073
GLN 6 0.0077
SER 7 0.0096
PRO 8 0.0088
ALA 9 0.0158
SER 10 0.0174
LEU 11 0.0164
ALA 12 0.0297
VAL 13 0.0249
SER 14 0.0246
LEU 15 0.0183
GLY 16 0.0230
GLN 17 0.0214
ARG 18 0.0160
ALA 19 0.0181
THR 20 0.0091
ILE 21 0.0062
SER 22 0.0049
CYS 23 0.0039
ARG 24 0.0118
ALA 25 0.0113
SER 26 0.0172
GLU 27 0.0159
SER 28 0.0069
VAL 29 0.0027
GLU 30 0.0054
TYR 30 0.0065
TYR 30 0.0109
GLY 30 0.0137
THR 30 0.0111
THR 31 0.0069
LEU 32 0.0054
MET 33 0.0055
GLN 34 0.0066
TRP 35 0.0070
TYR 36 0.0075
GLN 37 0.0068
GLN 38 0.0124
LYS 39 0.0160
PRO 40 0.0338
GLY 41 0.0349
GLN 42 0.0263
GLN 42 0.0264
PRO 43 0.0178
PRO 44 0.0087
LYS 45 0.0035
LEU 46 0.0032
LEU 47 0.0076
ILE 48 0.0079
TYR 49 0.0074
ALA 50 0.0075
ALA 51 0.0083
SER 52 0.0123
LYS 53 0.0092
VAL 54 0.0102
GLU 55 0.0083
SER 56 0.0175
GLY 57 0.0185
VAL 58 0.0158
PRO 59 0.0223
ALA 60 0.0176
ARG 61 0.0177
PHE 62 0.0157
SER 63 0.0167
GLY 64 0.0092
SER 65 0.0043
GLY 66 0.0034
SER 67 0.0067
GLY 68 0.0080
THR 69 0.0079
ASP 70 0.0073
PHE 71 0.0045
SER 72 0.0087
LEU 73 0.0094
ASN 74 0.0114
ILE 75 0.0139
HIS 76 0.0116
PRO 77 0.0114
VAL 78 0.0131
GLU 79 0.0135
GLU 80 0.0084
ASP 81 0.0056
ASP 82 0.0102
VAL 83 0.0079
ALA 84 0.0083
MET 85 0.0091
TYR 86 0.0088
PHE 87 0.0092
CYS 88 0.0051
GLN 89 0.0042
GLN 90 0.0026
SER 91 0.0040
ARG 92 0.0033
LYS 93 0.0059
VAL 94 0.0096
PRO 95 0.0093
LEU 96 0.0054
THR 97 0.0018
PHE 98 0.0023
GLY 99 0.0052
ALA 100 0.0144
GLY 101 0.0135
THR 102 0.0112
LYS 103 0.0140
LEU 104 0.0158
GLU 105 0.0226
LEU 106 0.0237
LYS 107 0.0335
TRP 118 0.0207
THR 119 0.0150
VAL 120 0.0068
GLU 121 0.0070
ASP 122 0.0125
LEU 123 0.0144
GLN 124 0.0149
LYS 125 0.0180
ARG 126 0.0282
LEU 127 0.0244
LEU 128 0.0312
ALA 129 0.0356
LEU 130 0.0280
ASP 131 0.0275
PRO 132 0.0239
MET 133 0.0157
MET 134 0.0079
GLU 135 0.0211
GLN 136 0.0157
GLU 137 0.0279
ILE 138 0.0350
GLU 139 0.0306
GLU 140 0.0308
GLU 140 0.0308
ILE 141 0.0365
ARG 142 0.0221
GLN 143 0.0165
LYS 144 0.0110
TYR 145 0.0107
GLN 146 0.0121
CYS 147 0.0117
LYS 148 0.0084
ARG 149 0.0096
GLN 150 0.0086
PRO 151 0.0080
ILE 152 0.0038
LEU 153 0.0058
ASP 154 0.0075
ALA 155 0.0049
ILE 156 0.0057
GLU 157 0.0113
ALA 158 0.0121
LYS 159 0.0134
MET 611 0.0205
PRO 612 0.0170
ILE 613 0.0151
TRP 614 0.0142
LYS 615 0.0068
PHE 616 0.0080
PRO 617 0.0080
ASP 618 0.0080
GLN 1 0.0102
VAL 2 0.0061
THR 3 0.0051
LEU 4 0.0033
LYS 5 0.0014
GLU 6 0.0014
SER 7 0.0015
GLY 8 0.0015
PRO 9 0.0031
GLY 10 0.0018
ILE 11 0.0019
LEU 12 0.0025
GLN 13 0.0047
PRO 14 0.0029
SER 15 0.0054
GLN 16 0.0074
THR 17 0.0080
LEU 18 0.0052
SER 19 0.0039
LEU 20 0.0012
THR 21 0.0031
CYS 22 0.0029
SER 23 0.0029
PHE 24 0.0028
SER 25 0.0055
GLY 26 0.0062
PHE 27 0.0044
SER 28 0.0034
LEU 29 0.0016
SER 30 0.0020
THR 31 0.0024
SER 31 0.0024
GLY 31 0.0028
MET 32 0.0015
GLY 33 0.0010
VAL 34 0.0007
SER 35 0.0010
TRP 36 0.0009
ILE 37 0.0022
ARG 38 0.0028
GLN 39 0.0026
PRO 40 0.0036
SER 41 0.0047
GLY 42 0.0047
LYS 43 0.0051
GLY 44 0.0035
LEU 45 0.0022
GLU 46 0.0019
TRP 47 0.0014
LEU 48 0.0017
ALA 49 0.0013
HIS 50 0.0013
ILE 51 0.0013
PHE 52 0.0013
TRP 53 0.0013
ASP 54 0.0017
ASP 55 0.0017
ASP 56 0.0023
LYS 57 0.0007
ARG 58 0.0010
TYR 59 0.0014
ASN 60 0.0022
PRO 61 0.0065
SER 62 0.0084
LEU 63 0.0072
LYS 64 0.0052
SER 65 0.0060
ARG 66 0.0059
LEU 67 0.0048
THR 68 0.0039
ILE 69 0.0021
SER 70 0.0022
LYS 71 0.0023
ASP 72 0.0031
THR 73 0.0041
SER 74 0.0073
ARG 75 0.0070
ASN 76 0.0037
LYS 77 0.0027
VAL 78 0.0027
PHE 79 0.0027
LEU 80 0.0027
LYS 81 0.0064
ILE 82 0.0060
THR 82 0.0074
SER 82 0.0070
VAL 82 0.0047
ASP 83 0.0036
THR 84 0.0022
ALA 85 0.0034
ASP 86 0.0037
THR 87 0.0027
ALA 88 0.0030
THR 89 0.0028
TYR 90 0.0020
TYR 91 0.0014
CYS 92 0.0013
ALA 93 0.0016
ARG 94 0.0015
ARG 95 0.0020
VAL 96 0.0020
VAL 97 0.0033
ALA 98 0.0032
THR 99 0.0029
ASP 100 0.0027
TRP 100 0.0025
TYR 100 0.0027
PHE 100 0.0029
ASP 101 0.0017
VAL 102 0.0015
VAL 102 0.0015
TRP 103 0.0015
GLY 104 0.0016
ALA 105 0.0018
GLY 106 0.0015
THR 107 0.0017
THR 108 0.0023
VAL 109 0.0026
THR 110 0.0018
VAL 111 0.0017
CYS 112 0.0021
SER 113 0.0092
GLY 114 0.0105
SER 115 0.0088
ASP 116 0.0105
TYR 117 0.0054
GLU 118 0.0115
PHE 119 0.0137
LEU 120 0.0084
LYS 121 0.0062
SER 122 0.0098
TRP 123 0.0091
THR 124 0.0091
VAL 125 0.0057
GLU 126 0.0071
ASP 127 0.0079
LEU 128 0.0042
GLN 129 0.0047
LYS 130 0.0057
ARG 131 0.0066
LEU 132 0.0060
LEU 133 0.0067
ALA 134 0.0056
LEU 135 0.0044
ASP 136 0.0053
PRO 137 0.0064
MET 138 0.0062
MET 139 0.0046
GLU 140 0.0050
GLN 141 0.0069
GLU 142 0.0053
ILE 143 0.0054
GLU 144 0.0070
GLU 145 0.0051
ILE 146 0.0053
ARG 147 0.0059
GLN 148 0.0057
LYS 149 0.0048
TYR 150 0.0046
GLN 151 0.0033
SER 152 0.0035
LYS 153 0.0033
ARG 154 0.0026
GLN 155 0.0019
PRO 156 0.0032
ILE 157 0.0032
LEU 158 0.0032
ASP 159 0.0041
ALA 160 0.0028
ILE 161 0.0021
GLU 162 0.0078
ALA 163 0.0081
ARG 0 0.0046
ASP 1 0.0029
ILE 2 0.0008
VAL 3 0.0025
LEU 4 0.0029
THR 5 0.0025
GLN 6 0.0020
SER 7 0.0016
PRO 8 0.0014
ALA 9 0.0020
SER 10 0.0016
LEU 11 0.0012
ALA 12 0.0010
VAL 13 0.0009
SER 14 0.0014
LEU 15 0.0015
GLY 16 0.0013
GLN 17 0.0012
ARG 18 0.0010
ALA 19 0.0008
THR 20 0.0007
ILE 21 0.0014
SER 22 0.0019
CYS 23 0.0027
ARG 24 0.0034
ALA 25 0.0023
SER 26 0.0009
GLU 27 0.0018
SER 28 0.0021
VAL 29 0.0026
GLU 30 0.0038
TYR 30 0.0047
TYR 30 0.0060
GLY 30 0.0069
THR 30 0.0060
THR 31 0.0048
LEU 32 0.0037
MET 33 0.0033
GLN 34 0.0031
TRP 35 0.0028
TYR 36 0.0004
GLN 37 0.0004
GLN 38 0.0016
LYS 39 0.0025
PRO 40 0.0046
GLY 41 0.0045
GLN 42 0.0038
PRO 43 0.0030
PRO 44 0.0016
LYS 45 0.0017
LEU 46 0.0021
LEU 47 0.0029
ILE 48 0.0031
TYR 49 0.0036
ALA 50 0.0039
ALA 51 0.0036
SER 52 0.0027
LYS 53 0.0014
VAL 54 0.0015
GLU 55 0.0036
SER 56 0.0124
SER 56 0.0124
GLY 57 0.0130
VAL 58 0.0065
PRO 59 0.0051
ALA 60 0.0031
ARG 61 0.0015
PHE 62 0.0011
SER 63 0.0004
GLY 64 0.0030
SER 65 0.0031
GLY 66 0.0034
SER 67 0.0037
GLY 68 0.0035
THR 69 0.0032
ASP 70 0.0035
PHE 71 0.0038
SER 72 0.0022
LEU 73 0.0015
ASN 74 0.0007
ILE 75 0.0008
HIS 76 0.0013
PRO 77 0.0010
VAL 78 0.0010
GLU 79 0.0013
GLU 80 0.0018
ASP 81 0.0017
ASP 82 0.0020
VAL 83 0.0024
ALA 84 0.0014
MET 85 0.0012
TYR 86 0.0006
PHE 87 0.0011
CYS 88 0.0025
GLN 89 0.0027
GLN 90 0.0026
SER 91 0.0030
SER 91 0.0030
ARG 92 0.0021
LYS 93 0.0011
VAL 94 0.0011
PRO 95 0.0017
LEU 96 0.0022
THR 97 0.0022
PHE 98 0.0023
GLY 99 0.0023
ALA 100 0.0022
GLY 101 0.0018
THR 102 0.0014
LYS 103 0.0015
LEU 104 0.0022
GLU 105 0.0020
LEU 106 0.0021
LYS 107 0.0021
ARG 108 0.0107
TYR 112 0.0066
GLU 113 0.0084
PHE 114 0.0071
LEU 115 0.0050
LYS 116 0.0073
SER 117 0.0062
TRP 118 0.0052
THR 119 0.0056
VAL 120 0.0032
GLU 121 0.0041
ASP 122 0.0042
LEU 123 0.0036
GLN 124 0.0035
LYS 125 0.0034
ARG 126 0.0026
LEU 127 0.0028
LEU 128 0.0026
ALA 129 0.0028
LEU 130 0.0030
ASP 131 0.0049
PRO 132 0.0066
MET 133 0.0061
MET 134 0.0053
GLU 135 0.0060
GLN 136 0.0050
GLU 137 0.0036
ILE 138 0.0034
GLU 139 0.0034
GLU 140 0.0010
ILE 141 0.0019
ARG 142 0.0029
GLN 143 0.0013
LYS 144 0.0019
TYR 145 0.0030
GLN 146 0.0025
CYS 147 0.0025
LYS 148 0.0042
ARG 149 0.0043
GLN 150 0.0043
PRO 151 0.0047
ILE 152 0.0043
LEU 153 0.0053
ASP 154 0.0050
ALA 155 0.0027
ILE 156 0.0020
GLU 157 0.0045
ALA 158 0.0112
LYS 159 0.0143
GLY 160 0.1152
THR 161 0.0375
LEU 162 0.0232
PRO 612 0.0030
ILE 613 0.0031
TRP 614 0.0026
LYS 615 0.0028
PHE 616 0.0029
PRO 617 0.0029
ASP 618 0.0031

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.

Should you encounter any unexpected behaviour, please let us know. elNémo has been hacked on november 27th. It has been moved away and runs again. **Still some additional cleaning from time to time** Sorry for the inconvenience.

*** IMMUNE SYSTEM 03-JUL-23 8JYQ ***

<R2> analysis for 2602022316101172576

--- normal mode 80 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* IMMUNE SYSTEM 03-JUL-23 8JYQ *

<R²> analysis for 2602022316101172576