CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 102  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0779
CYS 1860.0059
ILE 1870.0045
PRO 1880.0049
LEU 1890.0048
TRP 1900.0027
GLY 1910.0065
THR 1920.0139
VAL 1930.0194
SER 1940.0150
ILE 1950.0151
GLN 1960.0189
GLY 1970.0196
ASN 1980.0244
ARG 1990.0175
SER 2000.0228
GLU 2010.0175
MET 2020.0105
GLU 2030.0174
ASP 2040.0095
ALA 2050.0056
PHE 2060.0065
ALA 2070.0080
VAL 2080.0072
SER 2090.0077
PRO 2100.0079
HIS 2110.0079
PHE 2120.0090
LEU 2130.0083
LYS 2140.0171
LEU 2150.0052
PRO 2160.0195
ILE 2170.0221
LYS 2180.0223
MET 2190.0061
LEU 2200.0086
LEU 2340.0140
THR 2350.0075
GLY 2360.0022
HIS 2370.0049
PHE 2380.0047
PHE 2390.0047
GLY 2400.0030
VAL 2410.0025
TYR 2420.0013
ASP 2430.0024
GLY 2440.0099
HIS 2450.0142
GLY 2460.0321
GLY 2470.0296
HIS 2480.0236
LYS 2490.0243
VAL 2500.0083
ALA 2510.0043
ASP 2520.0093
TYR 2530.0120
CYS 2540.0098
ARG 2550.0098
ASP 2560.0235
ARG 2570.0184
LEU 2580.0067
HIS 2590.0077
PHE 2600.0113
ALA 2610.0155
LEU 2620.0147
ALA 2630.0124
GLU 2640.0180
GLU 2650.0309
ILE 2660.0160
GLU 2670.0058
ARG 2680.0255
ARG 2820.0114
GLN 2830.0049
VAL 2840.0193
GLN 2850.0135
TRP 2860.0118
ASP 2870.0104
LYS 2880.0163
VAL 2890.0176
PHE 2900.0122
THR 2910.0119
SER 2920.0168
CYS 2930.0108
PHE 2940.0076
LEU 2950.0169
THR 2960.0099
VAL 2970.0117
ASP 2980.0090
GLY 2990.0072
GLU 3000.0131
ILE 3010.0127
GLU 3020.0094
GLY 3030.0217
LYS 3040.0471
ILE 3050.0229
GLY 3060.0147
ARG 3070.0112
ALA 3080.0141
VAL 3090.0193
VAL 3100.0779
SER 3120.0640
SER 3130.0328
ASP 3140.0376
LYS 3150.0275
VAL 3160.0165
LEU 3170.0105
GLU 3180.0089
ALA 3190.0184
VAL 3200.0208
ALA 3210.0310
SER 3220.0338
GLU 3230.0297
THR 3240.0158
VAL 3250.0121
GLY 3260.0104
SER 3270.0085
THR 3280.0073
ALA 3290.0074
VAL 3300.0071
VAL 3310.0031
ALA 3320.0033
LEU 3330.0071
VAL 3340.0063
CYS 3350.0061
SER 3360.0097
SER 3370.0046
HIS 3380.0051
ILE 3390.0024
VAL 3400.0038
VAL 3410.0043
SER 3420.0042
ASN 3430.0097
CYS 3440.0108
GLY 3450.0131
ASP 3460.0102
SER 3470.0082
ARG 3480.0130
ALA 3490.0143
VAL 3500.0143
LEU 3510.0081
PHE 3520.0094
ARG 3530.0067
GLY 3540.0110
LYS 3550.0145
GLU 3560.0183
ALA 3570.0208
MET 3580.0124
PRO 3590.0242
LEU 3600.0132
SER 3610.0139
VAL 3620.0170
ASP 3630.0135
HIS 3640.0116
LYS 3650.0102
PRO 3660.0161
ASP 3670.0152
ARG 3680.0309
GLU 3690.0522
ASP 3700.0258
GLU 3710.0258
TYR 3720.0308
ALA 3730.0204
ARG 3740.0176
ILE 3750.0100
GLU 3760.0247
ASN 3770.0602
ALA 3780.0201
GLY 3790.0433
GLY 3800.0249
LYS 3810.0135
VAL 3820.0078
ILE 3830.0092
GLN 3840.0251
TRP 3850.0260
GLN 3860.0055
GLY 3870.0279
ALA 3880.0197
ARG 3890.0176
VAL 3900.0140
PHE 3910.0197
GLY 3920.0273
VAL 3930.0399
LEU 3940.0128
ALA 3950.0107
MET 3960.0094
SER 3970.0110
ARG 3980.0123
SER 3990.0158
ILE 4000.0131
GLY 4010.0143
ASP 4020.0201
ARG 4030.0232
TYR 4040.0279
LEU 4050.0232
LYS 4060.0266
PRO 4070.0255
TYR 4080.0088
VAL 4090.0117
ILE 4100.0113
PRO 4110.0135
GLU 4120.0082
PRO 4130.0067
GLU 4140.0113
VAL 4150.0045
THR 4160.0061
PHE 4170.0057
MET 4180.0068
PRO 4190.0116
ARG 4200.0087
SER 4210.0126
ARG 4220.0226
GLU 4230.0073
ASP 4240.0081
GLU 4250.0098
CYS 4260.0031
LEU 4270.0025
ILE 4280.0055
LEU 4290.0048
ALA 4300.0063
SER 4310.0042
ASP 4320.0047
GLY 4330.0065
LEU 4340.0075
TRP 4350.0084
ASP 4360.0091
VAL 4370.0129
MET 4380.0158
ASN 4390.0283
ASN 4400.0255
GLN 4410.0188
GLU 4420.0150
VAL 4430.0120
CYS 4440.0143
GLU 4450.0081
ILE 4460.0133
ALA 4470.0115
ARG 4480.0133
ARG 4490.0136
ARG 4500.0086
ILE 4510.0077
LEU 4520.0092
MET 4530.0160
TRP 4540.0171
HIS 4550.0073
LYS 4560.0202
LYS 4570.0359
ASN 4580.0052
GLY 4590.0182
ALA 4600.0495
PRO 4610.0359
PRO 4620.0061
LEU 4630.0122
ALA 4640.0074
GLU 4650.0047
ARG 4660.0051
GLY 4670.0051
LYS 4680.0077
GLY 4690.0082
ILE 4700.0114
ASP 4710.0107
PRO 4720.0135
ALA 4730.0126
CYS 4740.0039
GLN 4750.0047
ALA 4760.0044
ALA 4770.0071
ALA 4780.0187
ASP 4790.0195
TYR 4800.0130
LEU 4810.0164
SER 4820.0238
MET 4830.0108
LEU 4840.0077
ALA 4850.0116
LEU 4860.0055
GLN 4870.0291
LYS 4880.0155
GLY 4890.0098
SER 4900.0212
LYS 4910.0209
ASP 4920.0085
ASN 4930.0146
ILE 4940.0075
SER 4950.0088
ILE 4960.0119
ILE 4970.0076
VAL 4980.0047
ILE 4990.0010
ASP 5000.0057
LEU 5010.0065
LYS 5020.0149
ALA 5030.0146
GLN 5040.0116
ARG 5050.0079
LYS 5060.0192

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.