CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0832
CYS 1860.0115
ILE 1870.0052
PRO 1880.0052
LEU 1890.0023
TRP 1900.0049
GLY 1910.0082
THR 1920.0084
VAL 1930.0099
SER 1940.0059
ILE 1950.0060
GLN 1960.0062
GLY 1970.0067
ASN 1980.0056
ARG 1990.0070
SER 2000.0104
GLU 2010.0135
MET 2020.0135
GLU 2030.0123
ASP 2040.0094
ALA 2050.0109
PHE 2060.0105
ALA 2070.0113
VAL 2080.0124
SER 2090.0142
PRO 2100.0134
HIS 2110.0157
PHE 2120.0168
LEU 2130.0181
LYS 2140.0202
LEU 2150.0190
PRO 2160.0215
ILE 2170.0217
LYS 2180.0219
MET 2190.0182
LEU 2200.0202
LEU 2340.0193
THR 2350.0173
GLY 2360.0149
HIS 2370.0125
PHE 2380.0117
PHE 2390.0101
GLY 2400.0100
VAL 2410.0094
TYR 2420.0093
ASP 2430.0090
GLY 2440.0116
HIS 2450.0138
GLY 2460.0217
GLY 2470.0192
HIS 2480.0167
LYS 2490.0169
VAL 2500.0106
ALA 2510.0117
ASP 2520.0144
TYR 2530.0110
CYS 2540.0089
ARG 2550.0124
ASP 2560.0142
ARG 2570.0106
LEU 2580.0093
HIS 2590.0117
PHE 2600.0126
ALA 2610.0098
LEU 2620.0103
ALA 2630.0125
GLU 2640.0113
GLU 2650.0105
ILE 2660.0128
GLU 2670.0148
ARG 2680.0236
ARG 2820.0145
GLN 2830.0101
VAL 2840.0080
GLN 2850.0104
TRP 2860.0092
ASP 2870.0074
LYS 2880.0075
VAL 2890.0082
PHE 2900.0076
THR 2910.0072
SER 2920.0066
CYS 2930.0069
PHE 2940.0058
LEU 2950.0073
THR 2960.0064
VAL 2970.0049
ASP 2980.0070
GLY 2990.0123
GLU 3000.0095
ILE 3010.0115
GLU 3020.0197
GLY 3030.0203
LYS 3040.0226
ILE 3050.0166
GLY 3060.0144
ARG 3070.0093
ALA 3080.0132
VAL 3090.0129
VAL 3100.0286
SER 3120.0352
SER 3130.0375
ASP 3140.0236
LYS 3150.0152
VAL 3160.0171
LEU 3170.0204
GLU 3180.0208
ALA 3190.0210
VAL 3200.0157
ALA 3210.0216
SER 3220.0281
GLU 3230.0291
THR 3240.0288
VAL 3250.0205
GLY 3260.0107
SER 3270.0081
THR 3280.0066
ALA 3290.0077
VAL 3300.0089
VAL 3310.0096
ALA 3320.0093
LEU 3330.0109
VAL 3340.0102
CYS 3350.0125
SER 3360.0121
SER 3370.0137
HIS 3380.0123
ILE 3390.0093
VAL 3400.0095
VAL 3410.0081
SER 3420.0096
ASN 3430.0094
CYS 3440.0089
GLY 3450.0089
ASP 3460.0120
SER 3470.0111
ARG 3480.0095
ALA 3490.0080
VAL 3500.0051
LEU 3510.0041
PHE 3520.0052
ARG 3530.0086
GLY 3540.0132
LYS 3550.0116
GLU 3560.0071
ALA 3570.0032
MET 3580.0040
PRO 3590.0062
LEU 3600.0069
SER 3610.0095
VAL 3620.0168
ASP 3630.0165
HIS 3640.0179
LYS 3650.0207
PRO 3660.0182
ASP 3670.0347
ARG 3680.0403
GLU 3690.0521
ASP 3700.0481
GLU 3710.0294
TYR 3720.0258
ALA 3730.0387
ARG 3740.0379
ILE 3750.0246
GLU 3760.0294
ASN 3770.0500
ALA 3780.0507
GLY 3790.0485
GLY 3800.0325
LYS 3810.0185
VAL 3820.0113
ILE 3830.0305
GLN 3840.0535
TRP 3850.0687
GLN 3860.0832
GLY 3870.0657
ALA 3880.0391
ARG 3890.0296
VAL 3900.0201
PHE 3910.0350
GLY 3920.0444
VAL 3930.0477
LEU 3940.0281
ALA 3950.0267
MET 3960.0117
SER 3970.0059
ARG 3980.0071
SER 3990.0046
ILE 4000.0056
GLY 4010.0118
ASP 4020.0207
ARG 4030.0270
TYR 4040.0430
LEU 4050.0336
LYS 4060.0346
PRO 4070.0360
TYR 4080.0284
VAL 4090.0156
ILE 4100.0161
PRO 4110.0095
GLU 4120.0111
PRO 4130.0098
GLU 4140.0098
VAL 4150.0082
THR 4160.0065
PHE 4170.0086
MET 4180.0103
PRO 4190.0115
ARG 4200.0119
SER 4210.0122
ARG 4220.0160
GLU 4230.0140
ASP 4240.0100
GLU 4250.0081
CYS 4260.0032
LEU 4270.0032
ILE 4280.0050
LEU 4290.0077
ALA 4300.0081
SER 4310.0083
ASP 4320.0092
GLY 4330.0094
LEU 4340.0100
TRP 4350.0099
ASP 4360.0116
VAL 4370.0120
MET 4380.0097
ASN 4390.0072
ASN 4400.0042
GLN 4410.0030
GLU 4420.0055
VAL 4430.0058
CYS 4440.0040
GLU 4450.0076
ILE 4460.0087
ALA 4470.0079
ARG 4480.0106
ARG 4490.0141
ARG 4500.0154
ILE 4510.0149
LEU 4520.0219
MET 4530.0259
TRP 4540.0269
HIS 4550.0280
LYS 4560.0386
LYS 4570.0430
ASN 4580.0385
GLY 4590.0353
ALA 4600.0306
PRO 4610.0246
PRO 4620.0243
LEU 4630.0147
ALA 4640.0154
GLU 4650.0150
ARG 4660.0077
GLY 4670.0044
LYS 4680.0100
GLY 4690.0140
ILE 4700.0113
ASP 4710.0098
PRO 4720.0178
ALA 4730.0155
CYS 4740.0087
GLN 4750.0120
ALA 4760.0166
ALA 4770.0114
ALA 4780.0093
ASP 4790.0136
TYR 4800.0133
LEU 4810.0106
SER 4820.0100
MET 4830.0121
LEU 4840.0115
ALA 4850.0114
LEU 4860.0114
GLN 4870.0140
LYS 4880.0140
GLY 4890.0147
SER 4900.0104
LYS 4910.0105
ASP 4920.0083
ASN 4930.0056
ILE 4940.0078
SER 4950.0072
ILE 4960.0082
ILE 4970.0072
VAL 4980.0047
ILE 4990.0027
ASP 5000.0041
LEU 5010.0062
LYS 5020.0117
ALA 5030.0148
GLN 5040.0197
ARG 5050.0234
LYS 5060.0363

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.