CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0596
CYS 1860.0322
ILE 1870.0439
PRO 1880.0319
LEU 1890.0328
TRP 1900.0226
GLY 1910.0237
THR 1920.0151
VAL 1930.0174
SER 1940.0168
ILE 1950.0161
GLN 1960.0150
GLY 1970.0201
ASN 1980.0290
ARG 1990.0219
SER 2000.0245
GLU 2010.0179
MET 2020.0094
GLU 2030.0091
ASP 2040.0089
ALA 2050.0089
PHE 2060.0117
ALA 2070.0086
VAL 2080.0087
SER 2090.0050
PRO 2100.0166
HIS 2110.0234
PHE 2120.0171
LEU 2130.0233
LYS 2140.0329
LEU 2150.0257
PRO 2160.0279
ILE 2170.0228
LYS 2180.0364
MET 2190.0216
LEU 2200.0304
LEU 2340.0162
THR 2350.0217
GLY 2360.0080
HIS 2370.0082
PHE 2380.0029
PHE 2390.0112
GLY 2400.0129
VAL 2410.0122
TYR 2420.0090
ASP 2430.0080
GLY 2440.0039
HIS 2450.0102
GLY 2460.0197
GLY 2470.0142
HIS 2480.0084
LYS 2490.0078
VAL 2500.0035
ALA 2510.0059
ASP 2520.0088
TYR 2530.0094
CYS 2540.0109
ARG 2550.0110
ASP 2560.0132
ARG 2570.0165
LEU 2580.0168
HIS 2590.0158
PHE 2600.0203
ALA 2610.0227
LEU 2620.0207
ALA 2630.0204
GLU 2640.0216
GLU 2650.0176
ILE 2660.0159
GLU 2670.0197
ARG 2680.0323
ARG 2820.0500
GLN 2830.0324
VAL 2840.0412
GLN 2850.0353
TRP 2860.0115
ASP 2870.0095
LYS 2880.0092
VAL 2890.0190
PHE 2900.0137
THR 2910.0137
SER 2920.0164
CYS 2930.0167
PHE 2940.0113
LEU 2950.0134
THR 2960.0182
VAL 2970.0157
ASP 2980.0156
GLY 2990.0148
GLU 3000.0130
ILE 3010.0126
GLU 3020.0163
GLY 3030.0119
LYS 3040.0193
ILE 3050.0113
GLY 3060.0095
ARG 3070.0041
ALA 3080.0039
VAL 3090.0076
VAL 3100.0170
SER 3120.0137
SER 3130.0113
ASP 3140.0082
LYS 3150.0094
VAL 3160.0110
LEU 3170.0134
GLU 3180.0095
ALA 3190.0109
VAL 3200.0077
ALA 3210.0089
SER 3220.0179
GLU 3230.0159
THR 3240.0153
VAL 3250.0115
GLY 3260.0042
SER 3270.0043
THR 3280.0069
ALA 3290.0089
VAL 3300.0125
VAL 3310.0130
ALA 3320.0144
LEU 3330.0103
VAL 3340.0092
CYS 3350.0072
SER 3360.0113
SER 3370.0085
HIS 3380.0077
ILE 3390.0075
VAL 3400.0121
VAL 3410.0112
SER 3420.0119
ASN 3430.0100
CYS 3440.0062
GLY 3450.0064
ASP 3460.0085
SER 3470.0113
ARG 3480.0137
ALA 3490.0154
VAL 3500.0129
LEU 3510.0119
PHE 3520.0114
ARG 3530.0094
GLY 3540.0211
LYS 3550.0450
GLU 3560.0335
ALA 3570.0203
MET 3580.0095
PRO 3590.0144
LEU 3600.0107
SER 3610.0111
VAL 3620.0092
ASP 3630.0070
HIS 3640.0049
LYS 3650.0031
PRO 3660.0102
ASP 3670.0156
ARG 3680.0237
GLU 3690.0363
ASP 3700.0285
GLU 3710.0138
TYR 3720.0119
ALA 3730.0026
ARG 3740.0092
ILE 3750.0048
GLU 3760.0185
ASN 3770.0298
ALA 3780.0269
GLY 3790.0274
GLY 3800.0107
LYS 3810.0108
VAL 3820.0128
ILE 3830.0128
GLN 3840.0175
TRP 3850.0157
GLN 3860.0254
GLY 3870.0073
ALA 3880.0051
ARG 3890.0110
VAL 3900.0089
PHE 3910.0116
GLY 3920.0169
VAL 3930.0176
LEU 3940.0077
ALA 3950.0068
MET 3960.0035
SER 3970.0042
ARG 3980.0026
SER 3990.0035
ILE 4000.0056
GLY 4010.0073
ASP 4020.0113
ARG 4030.0117
TYR 4040.0134
LEU 4050.0091
LYS 4060.0133
PRO 4070.0142
TYR 4080.0073
VAL 4090.0085
ILE 4100.0056
PRO 4110.0052
GLU 4120.0091
PRO 4130.0099
GLU 4140.0101
VAL 4150.0099
THR 4160.0085
PHE 4170.0096
MET 4180.0093
PRO 4190.0100
ARG 4200.0125
SER 4210.0180
ARG 4220.0250
GLU 4230.0267
ASP 4240.0113
GLU 4250.0121
CYS 4260.0095
LEU 4270.0094
ILE 4280.0128
LEU 4290.0136
ALA 4300.0149
SER 4310.0130
ASP 4320.0110
GLY 4330.0114
LEU 4340.0161
TRP 4350.0139
ASP 4360.0135
VAL 4370.0191
MET 4380.0217
ASN 4390.0243
ASN 4400.0212
GLN 4410.0262
GLU 4420.0256
VAL 4430.0227
CYS 4440.0206
GLU 4450.0268
ILE 4460.0180
ALA 4470.0179
ARG 4480.0188
ARG 4490.0196
ARG 4500.0151
ILE 4510.0137
LEU 4520.0118
MET 4530.0167
TRP 4540.0125
HIS 4550.0069
LYS 4560.0481
LYS 4570.0338
ASN 4580.0107
GLY 4590.0087
ALA 4600.0177
PRO 4610.0270
PRO 4620.0408
LEU 4630.0596
ALA 4640.0498
GLU 4650.0432
ARG 4660.0462
GLY 4670.0451
LYS 4680.0350
GLY 4690.0368
ILE 4700.0304
ASP 4710.0300
PRO 4720.0259
ALA 4730.0203
CYS 4740.0200
GLN 4750.0196
ALA 4760.0178
ALA 4770.0140
ALA 4780.0138
ASP 4790.0169
TYR 4800.0147
LEU 4810.0114
SER 4820.0139
MET 4830.0162
LEU 4840.0146
ALA 4850.0152
LEU 4860.0131
GLN 4870.0138
LYS 4880.0192
GLY 4890.0160
SER 4900.0120
LYS 4910.0172
ASP 4920.0048
ASN 4930.0078
ILE 4940.0131
SER 4950.0153
ILE 4960.0127
ILE 4970.0137
VAL 4980.0119
ILE 4990.0117
ASP 5000.0129
LEU 5010.0061
LYS 5020.0204
ALA 5030.0235
GLN 5040.0340
ARG 5050.0170
LYS 5060.0087

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.