CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 51  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0546
CYS 1860.0302
ILE 1870.0185
PRO 1880.0162
LEU 1890.0091
TRP 1900.0094
GLY 1910.0170
THR 1920.0091
VAL 1930.0069
SER 1940.0036
ILE 1950.0052
GLN 1960.0055
GLY 1970.0043
ASN 1980.0117
ARG 1990.0144
SER 2000.0355
GLU 2010.0194
MET 2020.0132
GLU 2030.0176
ASP 2040.0048
ALA 2050.0038
PHE 2060.0059
ALA 2070.0059
VAL 2080.0155
SER 2090.0205
PRO 2100.0290
HIS 2110.0397
PHE 2120.0257
LEU 2130.0266
LYS 2140.0360
LEU 2150.0147
PRO 2160.0097
ILE 2170.0114
LYS 2180.0166
MET 2190.0151
LEU 2200.0357
LEU 2340.0375
THR 2350.0345
GLY 2360.0245
HIS 2370.0163
PHE 2380.0079
PHE 2390.0049
GLY 2400.0051
VAL 2410.0051
TYR 2420.0043
ASP 2430.0061
GLY 2440.0156
HIS 2450.0257
GLY 2460.0464
GLY 2470.0421
HIS 2480.0290
LYS 2490.0279
VAL 2500.0125
ALA 2510.0096
ASP 2520.0161
TYR 2530.0109
CYS 2540.0060
ARG 2550.0099
ASP 2560.0115
ARG 2570.0069
LEU 2580.0036
HIS 2590.0080
PHE 2600.0058
ALA 2610.0053
LEU 2620.0052
ALA 2630.0051
GLU 2640.0173
GLU 2650.0199
ILE 2660.0257
GLU 2670.0479
ARG 2680.0395
ARG 2820.0336
GLN 2830.0224
VAL 2840.0160
GLN 2850.0180
TRP 2860.0133
ASP 2870.0112
LYS 2880.0118
VAL 2890.0144
PHE 2900.0116
THR 2910.0106
SER 2920.0136
CYS 2930.0120
PHE 2940.0103
LEU 2950.0117
THR 2960.0134
VAL 2970.0089
ASP 2980.0078
GLY 2990.0104
GLU 3000.0084
ILE 3010.0076
GLU 3020.0110
GLY 3030.0103
LYS 3040.0164
ILE 3050.0117
GLY 3060.0121
ARG 3070.0159
ALA 3080.0288
VAL 3090.0236
VAL 3100.0073
SER 3120.0283
SER 3130.0283
ASP 3140.0310
LYS 3150.0319
VAL 3160.0220
LEU 3170.0163
GLU 3180.0116
ALA 3190.0104
VAL 3200.0086
ALA 3210.0113
SER 3220.0311
GLU 3230.0241
THR 3240.0234
VAL 3250.0213
GLY 3260.0119
SER 3270.0080
THR 3280.0096
ALA 3290.0092
VAL 3300.0097
VAL 3310.0098
ALA 3320.0098
LEU 3330.0079
VAL 3340.0090
CYS 3350.0137
SER 3360.0208
SER 3370.0210
HIS 3380.0159
ILE 3390.0145
VAL 3400.0128
VAL 3410.0129
SER 3420.0121
ASN 3430.0107
CYS 3440.0101
GLY 3450.0103
ASP 3460.0118
SER 3470.0102
ARG 3480.0118
ALA 3490.0117
VAL 3500.0092
LEU 3510.0102
PHE 3520.0093
ARG 3530.0123
GLY 3540.0184
LYS 3550.0292
GLU 3560.0366
ALA 3570.0180
MET 3580.0198
PRO 3590.0106
LEU 3600.0120
SER 3610.0107
VAL 3620.0073
ASP 3630.0111
HIS 3640.0129
LYS 3650.0168
PRO 3660.0141
ASP 3670.0164
ARG 3680.0241
GLU 3690.0237
ASP 3700.0127
GLU 3710.0090
TYR 3720.0100
ALA 3730.0107
ARG 3740.0043
ILE 3750.0041
GLU 3760.0079
ASN 3770.0089
ALA 3780.0057
GLY 3790.0128
GLY 3800.0154
LYS 3810.0128
VAL 3820.0102
ILE 3830.0105
GLN 3840.0155
TRP 3850.0023
GLN 3860.0153
GLY 3870.0218
ALA 3880.0123
ARG 3890.0144
VAL 3900.0148
PHE 3910.0161
GLY 3920.0146
VAL 3930.0182
LEU 3940.0144
ALA 3950.0118
MET 3960.0105
SER 3970.0132
ARG 3980.0092
SER 3990.0071
ILE 4000.0013
GLY 4010.0036
ASP 4020.0082
ARG 4030.0150
TYR 4040.0179
LEU 4050.0170
LYS 4060.0216
PRO 4070.0225
TYR 4080.0113
VAL 4090.0129
ILE 4100.0114
PRO 4110.0075
GLU 4120.0076
PRO 4130.0073
GLU 4140.0083
VAL 4150.0101
THR 4160.0116
PHE 4170.0154
MET 4180.0136
PRO 4190.0167
ARG 4200.0182
SER 4210.0248
ARG 4220.0503
GLU 4230.0331
ASP 4240.0158
GLU 4250.0183
CYS 4260.0157
LEU 4270.0152
ILE 4280.0113
LEU 4290.0117
ALA 4300.0093
SER 4310.0104
ASP 4320.0116
GLY 4330.0118
LEU 4340.0112
TRP 4350.0103
ASP 4360.0183
VAL 4370.0192
MET 4380.0167
ASN 4390.0139
ASN 4400.0139
GLN 4410.0216
GLU 4420.0205
VAL 4430.0121
CYS 4440.0076
GLU 4450.0110
ILE 4460.0074
ALA 4470.0046
ARG 4480.0073
ARG 4490.0036
ARG 4500.0093
ILE 4510.0087
LEU 4520.0055
MET 4530.0120
TRP 4540.0092
HIS 4550.0121
LYS 4560.0546
LYS 4570.0453
ASN 4580.0237
GLY 4590.0173
ALA 4600.0260
PRO 4610.0202
PRO 4620.0303
LEU 4630.0288
ALA 4640.0453
GLU 4650.0323
ARG 4660.0153
GLY 4670.0206
LYS 4680.0437
GLY 4690.0386
ILE 4700.0180
ASP 4710.0146
PRO 4720.0139
ALA 4730.0149
CYS 4740.0140
GLN 4750.0154
ALA 4760.0098
ALA 4770.0074
ALA 4780.0064
ASP 4790.0047
TYR 4800.0065
LEU 4810.0065
SER 4820.0066
MET 4830.0124
LEU 4840.0215
ALA 4850.0187
LEU 4860.0232
GLN 4870.0328
LYS 4880.0333
GLY 4890.0354
SER 4900.0203
LYS 4910.0221
ASP 4920.0063
ASN 4930.0046
ILE 4940.0057
SER 4950.0060
ILE 4960.0072
ILE 4970.0088
VAL 4980.0145
ILE 4990.0144
ASP 5000.0222
LEU 5010.0201
LYS 5020.0301
ALA 5030.0318
GLN 5040.0283
ARG 5050.0167
LYS 5060.0069

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.