CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0858
CYS 1860.0351
ILE 1870.0207
PRO 1880.0149
LEU 1890.0138
TRP 1900.0139
GLY 1910.0145
THR 1920.0096
VAL 1930.0082
SER 1940.0091
ILE 1950.0106
GLN 1960.0093
GLY 1970.0100
ASN 1980.0101
ARG 1990.0107
SER 2000.0239
GLU 2010.0087
MET 2020.0040
GLU 2030.0129
ASP 2040.0059
ALA 2050.0036
PHE 2060.0071
ALA 2070.0081
VAL 2080.0131
SER 2090.0107
PRO 2100.0097
HIS 2110.0149
PHE 2120.0116
LEU 2130.0152
LYS 2140.0274
LEU 2150.0110
PRO 2160.0105
ILE 2170.0241
LYS 2180.0180
MET 2190.0140
LEU 2200.0177
LEU 2340.0371
THR 2350.0295
GLY 2360.0171
HIS 2370.0094
PHE 2380.0058
PHE 2390.0072
GLY 2400.0087
VAL 2410.0092
TYR 2420.0098
ASP 2430.0132
GLY 2440.0197
HIS 2450.0321
GLY 2460.0563
GLY 2470.0461
HIS 2480.0284
LYS 2490.0288
VAL 2500.0159
ALA 2510.0104
ASP 2520.0121
TYR 2530.0092
CYS 2540.0044
ARG 2550.0022
ASP 2560.0041
ARG 2570.0032
LEU 2580.0039
HIS 2590.0082
PHE 2600.0125
ALA 2610.0108
LEU 2620.0149
ALA 2630.0261
GLU 2640.0439
GLU 2650.0367
ILE 2660.0539
GLU 2670.0858
ARG 2680.0653
ARG 2820.0134
GLN 2830.0107
VAL 2840.0115
GLN 2850.0104
TRP 2860.0044
ASP 2870.0027
LYS 2880.0167
VAL 2890.0188
PHE 2900.0034
THR 2910.0042
SER 2920.0153
CYS 2930.0079
PHE 2940.0031
LEU 2950.0081
THR 2960.0121
VAL 2970.0098
ASP 2980.0105
GLY 2990.0099
GLU 3000.0088
ILE 3010.0090
GLU 3020.0078
GLY 3030.0150
LYS 3040.0265
ILE 3050.0211
GLY 3060.0153
ARG 3070.0116
ALA 3080.0256
VAL 3090.0221
VAL 3100.0216
SER 3120.0297
SER 3130.0340
ASP 3140.0291
LYS 3150.0250
VAL 3160.0179
LEU 3170.0263
GLU 3180.0209
ALA 3190.0111
VAL 3200.0151
ALA 3210.0216
SER 3220.0369
GLU 3230.0260
THR 3240.0344
VAL 3250.0310
GLY 3260.0199
SER 3270.0138
THR 3280.0111
ALA 3290.0095
VAL 3300.0094
VAL 3310.0075
ALA 3320.0036
LEU 3330.0019
VAL 3340.0148
CYS 3350.0205
SER 3360.0326
SER 3370.0255
HIS 3380.0144
ILE 3390.0110
VAL 3400.0013
VAL 3410.0020
SER 3420.0062
ASN 3430.0077
CYS 3440.0064
GLY 3450.0078
ASP 3460.0098
SER 3470.0111
ARG 3480.0105
ALA 3490.0096
VAL 3500.0114
LEU 3510.0109
PHE 3520.0185
ARG 3530.0168
GLY 3540.0493
LYS 3550.0534
GLU 3560.0324
ALA 3570.0234
MET 3580.0127
PRO 3590.0081
LEU 3600.0038
SER 3610.0047
VAL 3620.0078
ASP 3630.0106
HIS 3640.0147
LYS 3650.0175
PRO 3660.0198
ASP 3670.0224
ARG 3680.0258
GLU 3690.0226
ASP 3700.0179
GLU 3710.0159
TYR 3720.0164
ALA 3730.0098
ARG 3740.0060
ILE 3750.0071
GLU 3760.0085
ASN 3770.0176
ALA 3780.0149
GLY 3790.0150
GLY 3800.0127
LYS 3810.0063
VAL 3820.0143
ILE 3830.0125
GLN 3840.0151
TRP 3850.0065
GLN 3860.0187
GLY 3870.0219
ALA 3880.0177
ARG 3890.0171
VAL 3900.0150
PHE 3910.0127
GLY 3920.0110
VAL 3930.0147
LEU 3940.0124
ALA 3950.0133
MET 3960.0083
SER 3970.0136
ARG 3980.0050
SER 3990.0023
ILE 4000.0067
GLY 4010.0097
ASP 4020.0107
ARG 4030.0090
TYR 4040.0085
LEU 4050.0119
LYS 4060.0134
PRO 4070.0146
TYR 4080.0116
VAL 4090.0126
ILE 4100.0068
PRO 4110.0027
GLU 4120.0024
PRO 4130.0016
GLU 4140.0050
VAL 4150.0041
THR 4160.0033
PHE 4170.0028
MET 4180.0088
PRO 4190.0106
ARG 4200.0116
SER 4210.0119
ARG 4220.0202
GLU 4230.0152
ASP 4240.0085
GLU 4250.0109
CYS 4260.0086
LEU 4270.0065
ILE 4280.0075
LEU 4290.0077
ALA 4300.0113
SER 4310.0114
ASP 4320.0119
GLY 4330.0090
LEU 4340.0099
TRP 4350.0113
ASP 4360.0094
VAL 4370.0080
MET 4380.0125
ASN 4390.0153
ASN 4400.0201
GLN 4410.0241
GLU 4420.0166
VAL 4430.0170
CYS 4440.0188
GLU 4450.0187
ILE 4460.0080
ALA 4470.0109
ARG 4480.0146
ARG 4490.0097
ARG 4500.0112
ILE 4510.0152
LEU 4520.0160
MET 4530.0164
TRP 4540.0177
HIS 4550.0241
LYS 4560.0413
LYS 4570.0405
ASN 4580.0323
GLY 4590.0335
ALA 4600.0148
PRO 4610.0086
PRO 4620.0249
LEU 4630.0232
ALA 4640.0336
GLU 4650.0369
ARG 4660.0189
GLY 4670.0218
LYS 4680.0225
GLY 4690.0258
ILE 4700.0193
ASP 4710.0168
PRO 4720.0148
ALA 4730.0165
CYS 4740.0140
GLN 4750.0135
ALA 4760.0119
ALA 4770.0101
ALA 4780.0094
ASP 4790.0103
TYR 4800.0104
LEU 4810.0090
SER 4820.0097
MET 4830.0154
LEU 4840.0192
ALA 4850.0165
LEU 4860.0250
GLN 4870.0355
LYS 4880.0269
GLY 4890.0270
SER 4900.0159
LYS 4910.0194
ASP 4920.0059
ASN 4930.0077
ILE 4940.0063
SER 4950.0071
ILE 4960.0050
ILE 4970.0059
VAL 4980.0054
ILE 4990.0056
ASP 5000.0074
LEU 5010.0086
LYS 5020.0103
ALA 5030.0165
GLN 5040.0148
ARG 5050.0176
LYS 5060.0122

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.