CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 64  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0523
CYS 1860.0115
ILE 1870.0216
PRO 1880.0328
LEU 1890.0278
TRP 1900.0290
GLY 1910.0225
THR 1920.0155
VAL 1930.0132
SER 1940.0077
ILE 1950.0066
GLN 1960.0188
GLY 1970.0205
ASN 1980.0177
ARG 1990.0162
SER 2000.0369
GLU 2010.0213
MET 2020.0194
GLU 2030.0220
ASP 2040.0155
ALA 2050.0147
PHE 2060.0097
ALA 2070.0086
VAL 2080.0144
SER 2090.0110
PRO 2100.0163
HIS 2110.0119
PHE 2120.0267
LEU 2130.0272
LYS 2140.0523
LEU 2150.0227
PRO 2160.0285
ILE 2170.0458
LYS 2180.0318
MET 2190.0120
LEU 2200.0263
LEU 2340.0416
THR 2350.0353
GLY 2360.0126
HIS 2370.0103
PHE 2380.0040
PHE 2390.0078
GLY 2400.0062
VAL 2410.0071
TYR 2420.0144
ASP 2430.0155
GLY 2440.0201
HIS 2450.0213
GLY 2460.0256
GLY 2470.0213
HIS 2480.0221
LYS 2490.0081
VAL 2500.0105
ALA 2510.0155
ASP 2520.0165
TYR 2530.0104
CYS 2540.0117
ARG 2550.0156
ASP 2560.0221
ARG 2570.0160
LEU 2580.0083
HIS 2590.0099
PHE 2600.0190
ALA 2610.0123
LEU 2620.0068
ALA 2630.0112
GLU 2640.0141
GLU 2650.0080
ILE 2660.0087
GLU 2670.0126
ARG 2680.0151
ARG 2820.0238
GLN 2830.0152
VAL 2840.0092
GLN 2850.0074
TRP 2860.0018
ASP 2870.0043
LYS 2880.0184
VAL 2890.0098
PHE 2900.0020
THR 2910.0043
SER 2920.0058
CYS 2930.0055
PHE 2940.0050
LEU 2950.0021
THR 2960.0124
VAL 2970.0132
ASP 2980.0114
GLY 2990.0151
GLU 3000.0154
ILE 3010.0160
GLU 3020.0232
GLY 3030.0224
LYS 3040.0226
ILE 3050.0135
GLY 3060.0126
ARG 3070.0119
ALA 3080.0267
VAL 3090.0434
VAL 3100.0133
SER 3120.0144
SER 3130.0103
ASP 3140.0117
LYS 3150.0222
VAL 3160.0278
LEU 3170.0155
GLU 3180.0266
ALA 3190.0292
VAL 3200.0225
ALA 3210.0187
SER 3220.0228
GLU 3230.0245
THR 3240.0295
VAL 3250.0151
GLY 3260.0138
SER 3270.0169
THR 3280.0141
ALA 3290.0127
VAL 3300.0063
VAL 3310.0060
ALA 3320.0072
LEU 3330.0053
VAL 3340.0069
CYS 3350.0053
SER 3360.0137
SER 3370.0174
HIS 3380.0122
ILE 3390.0126
VAL 3400.0083
VAL 3410.0078
SER 3420.0063
ASN 3430.0083
CYS 3440.0107
GLY 3450.0114
ASP 3460.0076
SER 3470.0047
ARG 3480.0042
ALA 3490.0078
VAL 3500.0122
LEU 3510.0132
PHE 3520.0110
ARG 3530.0098
GLY 3540.0464
LYS 3550.0301
GLU 3560.0123
ALA 3570.0072
MET 3580.0137
PRO 3590.0121
LEU 3600.0094
SER 3610.0043
VAL 3620.0077
ASP 3630.0078
HIS 3640.0096
LYS 3650.0080
PRO 3660.0064
ASP 3670.0051
ARG 3680.0094
GLU 3690.0165
ASP 3700.0145
GLU 3710.0100
TYR 3720.0065
ALA 3730.0065
ARG 3740.0041
ILE 3750.0039
GLU 3760.0103
ASN 3770.0145
ALA 3780.0076
GLY 3790.0042
GLY 3800.0027
LYS 3810.0091
VAL 3820.0093
ILE 3830.0120
GLN 3840.0137
TRP 3850.0111
GLN 3860.0161
GLY 3870.0183
ALA 3880.0087
ARG 3890.0108
VAL 3900.0062
PHE 3910.0062
GLY 3920.0140
VAL 3930.0131
LEU 3940.0051
ALA 3950.0070
MET 3960.0088
SER 3970.0087
ARG 3980.0106
SER 3990.0118
ILE 4000.0114
GLY 4010.0063
ASP 4020.0138
ARG 4030.0190
TYR 4040.0197
LEU 4050.0201
LYS 4060.0169
PRO 4070.0172
TYR 4080.0090
VAL 4090.0091
ILE 4100.0082
PRO 4110.0088
GLU 4120.0084
PRO 4130.0097
GLU 4140.0087
VAL 4150.0055
THR 4160.0060
PHE 4170.0080
MET 4180.0181
PRO 4190.0177
ARG 4200.0159
SER 4210.0128
ARG 4220.0160
GLU 4230.0180
ASP 4240.0091
GLU 4250.0140
CYS 4260.0144
LEU 4270.0140
ILE 4280.0108
LEU 4290.0095
ALA 4300.0067
SER 4310.0026
ASP 4320.0087
GLY 4330.0111
LEU 4340.0133
TRP 4350.0122
ASP 4360.0167
VAL 4370.0155
MET 4380.0075
ASN 4390.0032
ASN 4400.0037
GLN 4410.0031
GLU 4420.0080
VAL 4430.0090
CYS 4440.0082
GLU 4450.0135
ILE 4460.0235
ALA 4470.0138
ARG 4480.0097
ARG 4490.0212
ARG 4500.0261
ILE 4510.0168
LEU 4520.0183
MET 4530.0210
TRP 4540.0234
HIS 4550.0180
LYS 4560.0114
LYS 4570.0341
ASN 4580.0303
GLY 4590.0267
ALA 4600.0411
PRO 4610.0200
PRO 4620.0324
LEU 4630.0209
ALA 4640.0358
GLU 4650.0268
ARG 4660.0233
GLY 4670.0304
LYS 4680.0339
GLY 4690.0391
ILE 4700.0309
ASP 4710.0240
PRO 4720.0147
ALA 4730.0159
CYS 4740.0109
GLN 4750.0082
ALA 4760.0195
ALA 4770.0191
ALA 4780.0089
ASP 4790.0250
TYR 4800.0353
LEU 4810.0206
SER 4820.0146
MET 4830.0267
LEU 4840.0187
ALA 4850.0138
LEU 4860.0151
GLN 4870.0093
LYS 4880.0093
GLY 4890.0230
SER 4900.0242
LYS 4910.0302
ASP 4920.0113
ASN 4930.0128
ILE 4940.0078
SER 4950.0063
ILE 4960.0084
ILE 4970.0126
VAL 4980.0122
ILE 4990.0186
ASP 5000.0198
LEU 5010.0151
LYS 5020.0157
ALA 5030.0178
GLN 5040.0502
ARG 5050.0310
LYS 5060.0271

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.