CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1436
CYS 1860.0094
ILE 1870.0090
PRO 1880.0080
LEU 1890.0073
TRP 1900.0066
GLY 1910.0083
THR 1920.0064
VAL 1930.0072
SER 1940.0043
ILE 1950.0052
GLN 1960.0036
GLY 1970.0034
ASN 1980.0033
ARG 1990.0016
SER 2000.0025
GLU 2010.0039
MET 2020.0039
GLU 2030.0047
ASP 2040.0034
ALA 2050.0039
PHE 2060.0049
ALA 2070.0066
VAL 2080.0084
SER 2090.0105
PRO 2100.0121
HIS 2110.0142
PHE 2120.0136
LEU 2130.0152
LYS 2140.0178
LEU 2150.0173
PRO 2160.0208
ILE 2170.0201
LYS 2180.0216
MET 2190.0180
LEU 2200.0196
LEU 2340.0166
THR 2350.0149
GLY 2360.0125
HIS 2370.0101
PHE 2380.0083
PHE 2390.0057
GLY 2400.0052
VAL 2410.0038
TYR 2420.0045
ASP 2430.0038
GLY 2440.0054
HIS 2450.0059
GLY 2460.0061
GLY 2470.0058
HIS 2480.0050
LYS 2490.0044
VAL 2500.0044
ALA 2510.0045
ASP 2520.0054
TYR 2530.0063
CYS 2540.0047
ARG 2550.0045
ASP 2560.0058
ARG 2570.0056
LEU 2580.0061
HIS 2590.0073
PHE 2600.0079
ALA 2610.0073
LEU 2620.0089
ALA 2630.0114
GLU 2640.0107
GLU 2650.0104
ILE 2660.0148
GLU 2670.0188
ARG 2680.0224
ARG 2820.0208
GLN 2830.0171
VAL 2840.0162
GLN 2850.0161
TRP 2860.0122
ASP 2870.0108
LYS 2880.0112
VAL 2890.0107
PHE 2900.0073
THR 2910.0058
SER 2920.0068
CYS 2930.0064
PHE 2940.0032
LEU 2950.0014
THR 2960.0016
VAL 2970.0024
ASP 2980.0030
GLY 2990.0062
GLU 3000.0061
ILE 3010.0034
GLU 3020.0067
GLY 3030.0131
LYS 3040.0245
ILE 3050.0265
GLY 3060.0396
ARG 3070.0355
ALA 3080.0648
VAL 3090.0835
VAL 3100.1313
SER 3120.1389
SER 3130.1436
ASP 3140.1182
LYS 3150.0755
VAL 3160.0536
LEU 3170.0370
GLU 3180.0198
ALA 3190.0076
VAL 3200.0085
ALA 3210.0073
SER 3220.0042
GLU 3230.0039
THR 3240.0066
VAL 3250.0058
GLY 3260.0046
SER 3270.0046
THR 3280.0045
ALA 3290.0047
VAL 3300.0047
VAL 3310.0055
ALA 3320.0060
LEU 3330.0081
VAL 3340.0077
CYS 3350.0100
SER 3360.0094
SER 3370.0107
HIS 3380.0105
ILE 3390.0082
VAL 3400.0088
VAL 3410.0069
SER 3420.0060
ASN 3430.0051
CYS 3440.0039
GLY 3450.0041
ASP 3460.0046
SER 3470.0047
ARG 3480.0042
ALA 3490.0040
VAL 3500.0051
LEU 3510.0054
PHE 3520.0077
ARG 3530.0088
GLY 3540.0117
LYS 3550.0144
GLU 3560.0134
ALA 3570.0107
MET 3580.0098
PRO 3590.0080
LEU 3600.0073
SER 3610.0071
VAL 3620.0060
ASP 3630.0048
HIS 3640.0047
LYS 3650.0069
PRO 3660.0108
ASP 3670.0134
ARG 3680.0094
GLU 3690.0106
ASP 3700.0086
GLU 3710.0083
TYR 3720.0134
ALA 3730.0152
ARG 3740.0127
ILE 3750.0140
GLU 3760.0191
ASN 3770.0200
ALA 3780.0187
GLY 3790.0215
GLY 3800.0188
LYS 3810.0201
VAL 3820.0186
ILE 3830.0220
GLN 3840.0237
TRP 3850.0239
GLN 3860.0232
GLY 3870.0228
ALA 3880.0181
ARG 3890.0160
VAL 3900.0147
PHE 3910.0185
GLY 3920.0198
VAL 3930.0165
LEU 3940.0119
ALA 3950.0118
MET 3960.0072
SER 3970.0063
ARG 3980.0038
SER 3990.0035
ILE 4000.0033
GLY 4010.0034
ASP 4020.0053
ARG 4030.0061
TYR 4040.0093
LEU 4050.0105
LYS 4060.0105
PRO 4070.0128
TYR 4080.0118
VAL 4090.0073
ILE 4100.0043
PRO 4110.0022
GLU 4120.0028
PRO 4130.0040
GLU 4140.0069
VAL 4150.0074
THR 4160.0102
PHE 4170.0117
MET 4180.0111
PRO 4190.0112
ARG 4200.0080
SER 4210.0071
ARG 4220.0047
GLU 4230.0076
ASP 4240.0053
GLU 4250.0057
CYS 4260.0035
LEU 4270.0018
ILE 4280.0019
LEU 4290.0012
ALA 4300.0010
SER 4310.0016
ASP 4320.0023
GLY 4330.0015
LEU 4340.0039
TRP 4350.0051
ASP 4360.0063
VAL 4370.0083
MET 4380.0102
ASN 4390.0110
ASN 4400.0099
GLN 4410.0128
GLU 4420.0135
VAL 4430.0100
CYS 4440.0097
GLU 4450.0133
ILE 4460.0136
ALA 4470.0106
ARG 4480.0116
ARG 4490.0156
ARG 4500.0155
ILE 4510.0135
LEU 4520.0164
MET 4530.0200
TRP 4540.0192
HIS 4550.0184
LYS 4560.0229
LYS 4570.0259
ASN 4580.0240
GLY 4590.0209
ALA 4600.0199
PRO 4610.0197
PRO 4620.0209
LEU 4630.0187
ALA 4640.0238
GLU 4650.0212
ARG 4660.0154
GLY 4670.0132
LYS 4680.0158
GLY 4690.0159
ILE 4700.0133
ASP 4710.0126
PRO 4720.0159
ALA 4730.0142
CYS 4740.0098
GLN 4750.0119
ALA 4760.0144
ALA 4770.0117
ALA 4780.0088
ASP 4790.0118
TYR 4800.0135
LEU 4810.0102
SER 4820.0084
MET 4830.0116
LEU 4840.0122
ALA 4850.0088
LEU 4860.0090
GLN 4870.0122
LYS 4880.0118
GLY 4890.0093
SER 4900.0049
LYS 4910.0032
ASP 4920.0012
ASN 4930.0012
ILE 4940.0022
SER 4950.0019
ILE 4960.0027
ILE 4970.0026
VAL 4980.0040
ILE 4990.0029
ASP 5000.0045
LEU 5010.0013
LYS 5020.0035
ALA 5030.0039
GLN 5040.0082
ARG 5050.0115
LYS 5060.0179

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.