CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 70  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0824
CYS 1860.0233
ILE 1870.0140
PRO 1880.0105
LEU 1890.0096
TRP 1900.0085
GLY 1910.0074
THR 1920.0107
VAL 1930.0110
SER 1940.0111
ILE 1950.0103
GLN 1960.0196
GLY 1970.0245
ASN 1980.0243
ARG 1990.0185
SER 2000.0121
GLU 2010.0150
MET 2020.0197
GLU 2030.0208
ASP 2040.0085
ALA 2050.0051
PHE 2060.0090
ALA 2070.0118
VAL 2080.0142
SER 2090.0150
PRO 2100.0149
HIS 2110.0161
PHE 2120.0227
LEU 2130.0260
LYS 2140.0252
LEU 2150.0277
PRO 2160.0189
ILE 2170.0232
LYS 2180.0168
MET 2190.0085
LEU 2200.0206
LEU 2340.0085
THR 2350.0088
GLY 2360.0172
HIS 2370.0145
PHE 2380.0135
PHE 2390.0132
GLY 2400.0119
VAL 2410.0116
TYR 2420.0094
ASP 2430.0103
GLY 2440.0193
HIS 2450.0240
GLY 2460.0384
GLY 2470.0347
HIS 2480.0283
LYS 2490.0176
VAL 2500.0089
ALA 2510.0115
ASP 2520.0118
TYR 2530.0091
CYS 2540.0043
ARG 2550.0022
ASP 2560.0115
ARG 2570.0056
LEU 2580.0047
HIS 2590.0097
PHE 2600.0091
ALA 2610.0026
LEU 2620.0069
ALA 2630.0055
GLU 2640.0050
GLU 2650.0098
ILE 2660.0086
GLU 2670.0069
ARG 2680.0146
ARG 2820.0242
GLN 2830.0099
VAL 2840.0184
GLN 2850.0113
TRP 2860.0055
ASP 2870.0085
LYS 2880.0194
VAL 2890.0167
PHE 2900.0138
THR 2910.0182
SER 2920.0164
CYS 2930.0139
PHE 2940.0105
LEU 2950.0119
THR 2960.0105
VAL 2970.0103
ASP 2980.0182
GLY 2990.0194
GLU 3000.0135
ILE 3010.0160
GLU 3020.0337
GLY 3030.0333
LYS 3040.0530
ILE 3050.0177
GLY 3060.0257
ARG 3070.0160
ALA 3080.0276
VAL 3090.0349
VAL 3100.0472
SER 3120.0824
SER 3130.0596
ASP 3140.0370
LYS 3150.0231
VAL 3160.0239
LEU 3170.0366
GLU 3180.0309
ALA 3190.0371
VAL 3200.0191
ALA 3210.0168
SER 3220.0273
GLU 3230.0213
THR 3240.0136
VAL 3250.0153
GLY 3260.0148
SER 3270.0132
THR 3280.0094
ALA 3290.0101
VAL 3300.0092
VAL 3310.0094
ALA 3320.0072
LEU 3330.0080
VAL 3340.0144
CYS 3350.0206
SER 3360.0310
SER 3370.0323
HIS 3380.0261
ILE 3390.0234
VAL 3400.0132
VAL 3410.0106
SER 3420.0111
ASN 3430.0117
CYS 3440.0100
GLY 3450.0089
ASP 3460.0056
SER 3470.0043
ARG 3480.0055
ALA 3490.0081
VAL 3500.0109
LEU 3510.0185
PHE 3520.0185
ARG 3530.0189
GLY 3540.0176
LYS 3550.0063
GLU 3560.0186
ALA 3570.0079
MET 3580.0206
PRO 3590.0154
LEU 3600.0196
SER 3610.0143
VAL 3620.0201
ASP 3630.0154
HIS 3640.0136
LYS 3650.0125
PRO 3660.0119
ASP 3670.0122
ARG 3680.0226
GLU 3690.0278
ASP 3700.0117
GLU 3710.0035
TYR 3720.0064
ALA 3730.0019
ARG 3740.0057
ILE 3750.0073
GLU 3760.0138
ASN 3770.0149
ALA 3780.0101
GLY 3790.0114
GLY 3800.0106
LYS 3810.0110
VAL 3820.0131
ILE 3830.0107
GLN 3840.0121
TRP 3850.0085
GLN 3860.0127
GLY 3870.0016
ALA 3880.0068
ARG 3890.0068
VAL 3900.0062
PHE 3910.0101
GLY 3920.0097
VAL 3930.0180
LEU 3940.0139
ALA 3950.0103
MET 3960.0067
SER 3970.0072
ARG 3980.0058
SER 3990.0030
ILE 4000.0066
GLY 4010.0126
ASP 4020.0168
ARG 4030.0239
TYR 4040.0248
LEU 4050.0215
LYS 4060.0196
PRO 4070.0208
TYR 4080.0054
VAL 4090.0037
ILE 4100.0060
PRO 4110.0078
GLU 4120.0141
PRO 4130.0156
GLU 4140.0141
VAL 4150.0112
THR 4160.0174
PHE 4170.0203
MET 4180.0337
PRO 4190.0363
ARG 4200.0278
SER 4210.0234
ARG 4220.0232
GLU 4230.0113
ASP 4240.0177
GLU 4250.0175
CYS 4260.0170
LEU 4270.0149
ILE 4280.0117
LEU 4290.0111
ALA 4300.0108
SER 4310.0105
ASP 4320.0086
GLY 4330.0079
LEU 4340.0130
TRP 4350.0130
ASP 4360.0157
VAL 4370.0140
MET 4380.0184
ASN 4390.0167
ASN 4400.0109
GLN 4410.0119
GLU 4420.0175
VAL 4430.0178
CYS 4440.0147
GLU 4450.0129
ILE 4460.0130
ALA 4470.0121
ARG 4480.0073
ARG 4490.0083
ARG 4500.0070
ILE 4510.0066
LEU 4520.0135
MET 4530.0158
TRP 4540.0134
HIS 4550.0093
LYS 4560.0194
LYS 4570.0244
ASN 4580.0144
GLY 4590.0147
ALA 4600.0175
PRO 4610.0068
PRO 4620.0142
LEU 4630.0097
ALA 4640.0087
GLU 4650.0125
ARG 4660.0104
GLY 4670.0132
LYS 4680.0149
GLY 4690.0113
ILE 4700.0096
ASP 4710.0042
PRO 4720.0084
ALA 4730.0075
CYS 4740.0046
GLN 4750.0077
ALA 4760.0091
ALA 4770.0038
ALA 4780.0055
ASP 4790.0080
TYR 4800.0040
LEU 4810.0061
SER 4820.0075
MET 4830.0043
LEU 4840.0061
ALA 4850.0105
LEU 4860.0089
GLN 4870.0102
LYS 4880.0089
GLY 4890.0098
SER 4900.0135
LYS 4910.0171
ASP 4920.0120
ASN 4930.0120
ILE 4940.0041
SER 4950.0103
ILE 4960.0121
ILE 4970.0108
VAL 4980.0100
ILE 4990.0104
ASP 5000.0145
LEU 5010.0109
LYS 5020.0080
ALA 5030.0250
GLN 5040.0484
ARG 5050.0264
LYS 5060.0329

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.