CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 74  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0686
CYS 1860.0241
ILE 1870.0213
PRO 1880.0153
LEU 1890.0131
TRP 1900.0139
GLY 1910.0137
THR 1920.0101
VAL 1930.0144
SER 1940.0170
ILE 1950.0177
GLN 1960.0209
GLY 1970.0180
ASN 1980.0190
ARG 1990.0044
SER 2000.0234
GLU 2010.0152
MET 2020.0181
GLU 2030.0214
ASP 2040.0206
ALA 2050.0195
PHE 2060.0146
ALA 2070.0095
VAL 2080.0157
SER 2090.0223
PRO 2100.0230
HIS 2110.0288
PHE 2120.0270
LEU 2130.0291
LYS 2140.0315
LEU 2150.0311
PRO 2160.0247
ILE 2170.0291
LYS 2180.0104
MET 2190.0135
LEU 2200.0151
LEU 2340.0332
THR 2350.0345
GLY 2360.0222
HIS 2370.0201
PHE 2380.0164
PHE 2390.0147
GLY 2400.0065
VAL 2410.0106
TYR 2420.0143
ASP 2430.0163
GLY 2440.0199
HIS 2450.0132
GLY 2460.0165
GLY 2470.0136
HIS 2480.0202
LYS 2490.0271
VAL 2500.0152
ALA 2510.0213
ASP 2520.0278
TYR 2530.0209
CYS 2540.0167
ARG 2550.0155
ASP 2560.0211
ARG 2570.0185
LEU 2580.0180
HIS 2590.0227
PHE 2600.0344
ALA 2610.0320
LEU 2620.0318
ALA 2630.0336
GLU 2640.0273
GLU 2650.0234
ILE 2660.0161
GLU 2670.0484
ARG 2680.0686
ARG 2820.0188
GLN 2830.0332
VAL 2840.0611
GLN 2850.0248
TRP 2860.0209
ASP 2870.0241
LYS 2880.0241
VAL 2890.0109
PHE 2900.0190
THR 2910.0131
SER 2920.0164
CYS 2930.0223
PHE 2940.0141
LEU 2950.0128
THR 2960.0154
VAL 2970.0143
ASP 2980.0087
GLY 2990.0111
GLU 3000.0082
ILE 3010.0079
GLU 3020.0171
GLY 3030.0140
LYS 3040.0231
ILE 3050.0116
GLY 3060.0038
ARG 3070.0028
ALA 3080.0088
VAL 3090.0136
VAL 3100.0156
SER 3120.0290
SER 3130.0148
ASP 3140.0066
LYS 3150.0064
VAL 3160.0069
LEU 3170.0029
GLU 3180.0042
ALA 3190.0106
VAL 3200.0169
ALA 3210.0187
SER 3220.0298
GLU 3230.0304
THR 3240.0248
VAL 3250.0085
GLY 3260.0121
SER 3270.0178
THR 3280.0112
ALA 3290.0081
VAL 3300.0011
VAL 3310.0091
ALA 3320.0099
LEU 3330.0112
VAL 3340.0085
CYS 3350.0119
SER 3360.0184
SER 3370.0224
HIS 3380.0135
ILE 3390.0099
VAL 3400.0190
VAL 3410.0173
SER 3420.0194
ASN 3430.0103
CYS 3440.0037
GLY 3450.0060
ASP 3460.0128
SER 3470.0111
ARG 3480.0124
ALA 3490.0122
VAL 3500.0174
LEU 3510.0184
PHE 3520.0192
ARG 3530.0206
GLY 3540.0248
LYS 3550.0234
GLU 3560.0167
ALA 3570.0257
MET 3580.0246
PRO 3590.0262
LEU 3600.0161
SER 3610.0191
VAL 3620.0287
ASP 3630.0213
HIS 3640.0082
LYS 3650.0093
PRO 3660.0035
ASP 3670.0029
ARG 3680.0045
GLU 3690.0071
ASP 3700.0063
GLU 3710.0032
TYR 3720.0043
ALA 3730.0024
ARG 3740.0047
ILE 3750.0042
GLU 3760.0056
ASN 3770.0141
ALA 3780.0081
GLY 3790.0059
GLY 3800.0030
LYS 3810.0036
VAL 3820.0094
ILE 3830.0089
GLN 3840.0118
TRP 3850.0096
GLN 3860.0061
GLY 3870.0040
ALA 3880.0050
ARG 3890.0078
VAL 3900.0062
PHE 3910.0060
GLY 3920.0109
VAL 3930.0090
LEU 3940.0067
ALA 3950.0063
MET 3960.0060
SER 3970.0027
ARG 3980.0013
SER 3990.0053
ILE 4000.0036
GLY 4010.0046
ASP 4020.0033
ARG 4030.0144
TYR 4040.0165
LEU 4050.0049
LYS 4060.0092
PRO 4070.0089
TYR 4080.0061
VAL 4090.0068
ILE 4100.0035
PRO 4110.0054
GLU 4120.0094
PRO 4130.0142
GLU 4140.0217
VAL 4150.0284
THR 4160.0307
PHE 4170.0280
MET 4180.0072
PRO 4190.0118
ARG 4200.0191
SER 4210.0242
ARG 4220.0297
GLU 4230.0209
ASP 4240.0152
GLU 4250.0114
CYS 4260.0105
LEU 4270.0075
ILE 4280.0100
LEU 4290.0065
ALA 4300.0101
SER 4310.0089
ASP 4320.0041
GLY 4330.0054
LEU 4340.0071
TRP 4350.0079
ASP 4360.0160
VAL 4370.0273
MET 4380.0169
ASN 4390.0184
ASN 4400.0202
GLN 4410.0160
GLU 4420.0188
VAL 4430.0164
CYS 4440.0182
GLU 4450.0143
ILE 4460.0153
ALA 4470.0101
ARG 4480.0135
ARG 4490.0126
ARG 4500.0074
ILE 4510.0122
LEU 4520.0157
MET 4530.0129
TRP 4540.0224
HIS 4550.0171
LYS 4560.0106
LYS 4570.0346
ASN 4580.0320
GLY 4590.0234
ALA 4600.0190
PRO 4610.0186
PRO 4620.0156
LEU 4630.0187
ALA 4640.0220
GLU 4650.0136
ARG 4660.0080
GLY 4670.0058
LYS 4680.0187
GLY 4690.0277
ILE 4700.0152
ASP 4710.0183
PRO 4720.0228
ALA 4730.0227
CYS 4740.0159
GLN 4750.0138
ALA 4760.0118
ALA 4770.0101
ALA 4780.0128
ASP 4790.0170
TYR 4800.0164
LEU 4810.0062
SER 4820.0089
MET 4830.0089
LEU 4840.0153
ALA 4850.0237
LEU 4860.0385
GLN 4870.0450
LYS 4880.0539
GLY 4890.0622
SER 4900.0199
LYS 4910.0196
ASP 4920.0084
ASN 4930.0175
ILE 4940.0118
SER 4950.0144
ILE 4960.0107
ILE 4970.0079
VAL 4980.0074
ILE 4990.0056
ASP 5000.0047
LEU 5010.0052
LYS 5020.0053
ALA 5030.0068
GLN 5040.0108
ARG 5050.0126
LYS 5060.0230

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.