CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

CA strain for 2602031626281395717

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
CYS 186ILE 187 -0.0001
ILE 187PRO 188 0.0233
PRO 188LEU 189 0.0000
LEU 189TRP 190 0.0186
TRP 190GLY 191 0.0002
GLY 191THR 192 0.0874
THR 192VAL 193 0.0002
VAL 193SER 194 0.1724
SER 194ILE 195 0.0001
ILE 195GLN 196 0.0292
GLN 196GLY 197 -0.0003
GLY 197ASN 198 -0.0167
ASN 198ARG 199 -0.0002
ARG 199SER 200 0.0125
SER 200GLU 201 0.0003
GLU 201MET 202 -0.0431
MET 202GLU 203 -0.0003
GLU 203ASP 204 0.0000
ASP 204ALA 205 -0.0002
ALA 205PHE 206 0.0688
PHE 206ALA 207 -0.0002
ALA 207VAL 208 0.1746
VAL 208SER 209 0.0001
SER 209PRO 210 0.1347
PRO 210HIS 211 0.0001
HIS 211PHE 212 0.1573
PHE 212LEU 213 0.0001
LEU 213LYS 214 0.0557
LYS 214LEU 215 -0.0000
LEU 215PRO 216 -0.0127
PRO 216ILE 217 0.0003
ILE 217LYS 218 -0.0544
LYS 218MET 219 0.0001
MET 219LEU 220 -0.0086
LEU 220LEU 234 -0.0350
LEU 234THR 235 0.0002
THR 235GLY 236 -0.0159
GLY 236HIS 237 0.0001
HIS 237PHE 238 0.0439
PHE 238PHE 239 -0.0002
PHE 239GLY 240 0.0166
GLY 240VAL 241 0.0002
VAL 241TYR 242 0.0373
TYR 242ASP 243 0.0004
ASP 243GLY 244 -0.0432
GLY 244HIS 245 0.0004
HIS 245GLY 246 -0.0609
GLY 246GLY 247 0.0001
GLY 247HIS 248 0.0572
HIS 248LYS 249 -0.0001
LYS 249VAL 250 -0.0622
VAL 250ALA 251 0.0003
ALA 251ASP 252 0.0303
ASP 252TYR 253 0.0002
TYR 253CYS 254 0.0829
CYS 254ARG 255 0.0002
ARG 255ASP 256 -0.0284
ASP 256ARG 257 0.0001
ARG 257LEU 258 0.0617
LEU 258HIS 259 0.0001
HIS 259PHE 260 -0.0350
PHE 260ALA 261 0.0001
ALA 261LEU 262 0.1081
LEU 262ALA 263 -0.0001
ALA 263GLU 264 0.1166
GLU 264GLU 265 0.0000
GLU 265ILE 266 0.0399
ILE 266GLU 267 -0.0000
GLU 267ARG 268 0.0600
ARG 268ARG 282 0.1314
ARG 282GLN 283 0.0004
GLN 283VAL 284 -0.0190
VAL 284GLN 285 -0.0001
GLN 285TRP 286 0.0087
TRP 286ASP 287 0.0004
ASP 287LYS 288 0.0210
LYS 288VAL 289 -0.0000
VAL 289PHE 290 0.0063
PHE 290THR 291 0.0001
THR 291SER 292 0.0190
SER 292CYS 293 0.0002
CYS 293PHE 294 0.0280
PHE 294LEU 295 -0.0001
LEU 295THR 296 0.0486
THR 296VAL 297 0.0000
VAL 297ASP 298 0.0829
ASP 298GLY 299 -0.0001
GLY 299GLU 300 0.0226
GLU 300ILE 301 0.0002
ILE 301GLU 302 0.0804
GLU 302GLY 303 -0.0003
GLY 303LYS 304 -0.0145
LYS 304ILE 305 -0.0000
ILE 305GLY 306 0.0911
GLY 306ARG 307 0.0003
ARG 307ALA 308 0.1089
ALA 308VAL 309 0.0000
VAL 309VAL 310 -0.0041
VAL 310SER 312 0.0206
SER 312SER 313 -0.0007
SER 313ASP 314 0.0315
ASP 314LYS 315 0.0002
LYS 315VAL 316 -0.0356
VAL 316LEU 317 -0.0000
LEU 317GLU 318 0.0233
GLU 318ALA 319 -0.0004
ALA 319VAL 320 0.0419
VAL 320ALA 321 0.0004
ALA 321SER 322 0.0124
SER 322GLU 323 -0.0001
GLU 323THR 324 0.0028
THR 324VAL 325 0.0002
VAL 325GLY 326 -0.0716
GLY 326SER 327 0.0000
SER 327THR 328 -0.0926
THR 328ALA 329 0.0002
ALA 329VAL 330 -0.0186
VAL 330VAL 331 -0.0006
VAL 331ALA 332 -0.0011
ALA 332LEU 333 0.0003
LEU 333VAL 334 0.0121
VAL 334CYS 335 0.0000
CYS 335SER 336 0.0100
SER 336SER 337 -0.0004
SER 337HIS 338 -0.0646
HIS 338ILE 339 0.0001
ILE 339VAL 340 -0.0400
VAL 340VAL 341 0.0000
VAL 341SER 342 -0.0441
SER 342ASN 343 0.0000
ASN 343CYS 344 -0.0696
CYS 344GLY 345 0.0001
GLY 345ASP 346 0.0000
ASP 346SER 347 0.0002
SER 347ARG 348 -0.1178
ARG 348ALA 349 0.0001
ALA 349VAL 350 -0.0626
VAL 350LEU 351 0.0002
LEU 351PHE 352 -0.0478
PHE 352ARG 353 -0.0001
ARG 353GLY 354 0.0188
GLY 354LYS 355 -0.0000
LYS 355GLU 356 -0.0523
GLU 356ALA 357 -0.0003
ALA 357MET 358 -0.0165
MET 358PRO 359 0.0001
PRO 359LEU 360 0.0916
LEU 360SER 361 0.0001
SER 361VAL 362 -0.2505
VAL 362ASP 363 -0.0002
ASP 363HIS 364 -0.1750
HIS 364LYS 365 -0.0000
LYS 365PRO 366 -0.0657
PRO 366ASP 367 -0.0002
ASP 367ARG 368 -0.0876
ARG 368GLU 369 -0.0002
GLU 369ASP 370 0.0309
ASP 370GLU 371 0.0000
GLU 371TYR 372 -0.0382
TYR 372ALA 373 0.0004
ALA 373ARG 374 0.0096
ARG 374ILE 375 0.0001
ILE 375GLU 376 -0.0106
GLU 376ASN 377 0.0004
ASN 377ALA 378 0.0142
ALA 378GLY 379 -0.0000
GLY 379GLY 380 -0.0014
GLY 380LYS 381 -0.0004
LYS 381VAL 382 -0.0228
VAL 382ILE 383 0.0001
ILE 383GLN 384 0.0107
GLN 384TRP 385 -0.0003
TRP 385GLN 386 0.0214
GLN 386GLY 387 -0.0002
GLY 387ALA 388 -0.0420
ALA 388ARG 389 0.0001
ARG 389VAL 390 -0.0169
VAL 390PHE 391 0.0003
PHE 391GLY 392 -0.0023
GLY 392VAL 393 0.0003
VAL 393LEU 394 0.0286
LEU 394ALA 395 0.0002
ALA 395MET 396 0.0137
MET 396SER 397 -0.0001
SER 397ARG 398 0.0481
ARG 398SER 399 0.0001
SER 399ILE 400 0.0131
ILE 400GLY 401 0.0000
GLY 401ASP 402 0.0495
ASP 402ARG 403 0.0001
ARG 403TYR 404 0.0028
TYR 404LEU 405 -0.0004
LEU 405LYS 406 0.0233
LYS 406PRO 407 -0.0001
PRO 407TYR 408 -0.0404
TYR 408VAL 409 0.0001
VAL 409ILE 410 0.0139
ILE 410PRO 411 -0.0002
PRO 411GLU 412 -0.0689
GLU 412PRO 413 -0.0002
PRO 413GLU 414 -0.0592
GLU 414VAL 415 -0.0000
VAL 415THR 416 -0.1116
THR 416PHE 417 -0.0001
PHE 417MET 418 -0.0573
MET 418PRO 419 0.0002
PRO 419ARG 420 -0.0720
ARG 420SER 421 0.0002
SER 421ARG 422 -0.0500
ARG 422GLU 423 0.0002
GLU 423ASP 424 0.0169
ASP 424GLU 425 0.0000
GLU 425CYS 426 0.0145
CYS 426LEU 427 -0.0001
LEU 427ILE 428 0.0127
ILE 428LEU 429 0.0000
LEU 429ALA 430 0.0056
ALA 430SER 431 -0.0003
SER 431ASP 432 0.0087
ASP 432GLY 433 0.0000
GLY 433LEU 434 0.0266
LEU 434TRP 435 -0.0000
TRP 435ASP 436 0.0510
ASP 436VAL 437 -0.0001
VAL 437MET 438 -0.0210
MET 438ASN 439 -0.0001
ASN 439ASN 440 0.0708
ASN 440GLN 441 0.0000
GLN 441GLU 442 0.0222
GLU 442VAL 443 0.0005
VAL 443CYS 444 0.0027
CYS 444GLU 445 -0.0000
GLU 445ILE 446 0.0324
ILE 446ALA 447 0.0001
ALA 447ARG 448 0.0133
ARG 448ARG 449 0.0003
ARG 449ARG 450 0.0161
ARG 450ILE 451 -0.0001
ILE 451LEU 452 0.0247
LEU 452MET 453 0.0001
MET 453TRP 454 -0.0138
TRP 454HIS 455 -0.0000
HIS 455LYS 456 0.0218
LYS 456LYS 457 0.0000
LYS 457ASN 458 0.0081
ASN 458GLY 459 -0.0001
GLY 459ALA 460 -0.0051
ALA 460PRO 461 0.0001
PRO 461PRO 462 0.0298
PRO 462LEU 463 0.0004
LEU 463ALA 464 -0.0155
ALA 464GLU 465 0.0002
GLU 465ARG 466 -0.0954
ARG 466GLY 467 0.0000
GLY 467LYS 468 0.0261
LYS 468GLY 469 0.0001
GLY 469ILE 470 -0.0465
ILE 470ASP 471 0.0001
ASP 471PRO 472 -0.0327
PRO 472ALA 473 -0.0000
ALA 473CYS 474 0.0180
CYS 474GLN 475 -0.0001
GLN 475ALA 476 -0.0024
ALA 476ALA 477 -0.0003
ALA 477ALA 478 0.0414
ALA 478ASP 479 0.0002
ASP 479TYR 480 -0.0046
TYR 480LEU 481 0.0001
LEU 481SER 482 0.0250
SER 482MET 483 0.0004
MET 483LEU 484 0.0192
LEU 484ALA 485 -0.0003
ALA 485LEU 486 0.0068
LEU 486GLN 487 0.0003
GLN 487LYS 488 0.0159
LYS 488GLY 489 -0.0003
GLY 489SER 490 -0.0097
SER 490LYS 491 0.0002
LYS 491ASP 492 -0.0400
ASP 492ASN 493 -0.0001
ASN 493ILE 494 0.0261
ILE 494SER 495 0.0001
SER 495ILE 496 0.0314
ILE 496ILE 497 0.0000
ILE 497VAL 498 0.0578
VAL 498ILE 499 -0.0004
ILE 499ASP 500 0.0555
ASP 500LEU 501 0.0002
LEU 501LYS 502 0.0181
LYS 502ALA 503 -0.0004
ALA 503GLN 504 0.0263
GLN 504ARG 505 -0.0003
ARG 505LYS 506 -0.0570

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.