CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0535
CYS 1860.0166
ILE 1870.0115
PRO 1880.0058
LEU 1890.0014
TRP 1900.0145
GLY 1910.0187
THR 1920.0252
VAL 1930.0212
SER 1940.0087
ILE 1950.0088
GLN 1960.0194
GLY 1970.0133
ASN 1980.0151
ARG 1990.0155
SER 2000.0289
GLU 2010.0158
MET 2020.0092
GLU 2030.0072
ASP 2040.0034
ALA 2050.0049
PHE 2060.0197
ALA 2070.0239
VAL 2080.0234
SER 2090.0204
PRO 2100.0128
HIS 2110.0172
PHE 2120.0128
LEU 2130.0132
LYS 2140.0264
LEU 2150.0192
PRO 2160.0354
ILE 2170.0247
LYS 2180.0192
MET 2190.0210
LEU 2200.0143
LEU 2340.0162
THR 2350.0198
GLY 2360.0120
HIS 2370.0144
PHE 2380.0202
PHE 2390.0224
GLY 2400.0222
VAL 2410.0146
TYR 2420.0072
ASP 2430.0036
GLY 2440.0081
HIS 2450.0077
GLY 2460.0123
GLY 2470.0060
HIS 2480.0064
LYS 2490.0057
VAL 2500.0056
ALA 2510.0049
ASP 2520.0057
TYR 2530.0076
CYS 2540.0037
ARG 2550.0046
ASP 2560.0110
ARG 2570.0141
LEU 2580.0121
HIS 2590.0209
PHE 2600.0307
ALA 2610.0329
LEU 2620.0300
ALA 2630.0327
GLU 2640.0381
GLU 2650.0380
ILE 2660.0236
GLU 2670.0204
ARG 2680.0467
ARG 2820.0111
GLN 2830.0102
VAL 2840.0173
GLN 2850.0131
TRP 2860.0059
ASP 2870.0069
LYS 2880.0140
VAL 2890.0147
PHE 2900.0043
THR 2910.0061
SER 2920.0135
CYS 2930.0116
PHE 2940.0029
LEU 2950.0038
THR 2960.0102
VAL 2970.0074
ASP 2980.0073
GLY 2990.0097
GLU 3000.0110
ILE 3010.0109
GLU 3020.0142
GLY 3030.0163
LYS 3040.0186
ILE 3050.0165
GLY 3060.0090
ARG 3070.0108
ALA 3080.0146
VAL 3090.0133
VAL 3100.0235
SER 3120.0535
SER 3130.0447
ASP 3140.0348
LYS 3150.0196
VAL 3160.0071
LEU 3170.0141
GLU 3180.0082
ALA 3190.0065
VAL 3200.0095
ALA 3210.0038
SER 3220.0283
GLU 3230.0342
THR 3240.0186
VAL 3250.0142
GLY 3260.0109
SER 3270.0104
THR 3280.0097
ALA 3290.0128
VAL 3300.0130
VAL 3310.0159
ALA 3320.0176
LEU 3330.0157
VAL 3340.0124
CYS 3350.0103
SER 3360.0200
SER 3370.0285
HIS 3380.0158
ILE 3390.0157
VAL 3400.0162
VAL 3410.0162
SER 3420.0167
ASN 3430.0159
CYS 3440.0165
GLY 3450.0127
ASP 3460.0095
SER 3470.0056
ARG 3480.0076
ALA 3490.0058
VAL 3500.0147
LEU 3510.0181
PHE 3520.0225
ARG 3530.0219
GLY 3540.0167
LYS 3550.0228
GLU 3560.0267
ALA 3570.0230
MET 3580.0200
PRO 3590.0211
LEU 3600.0086
SER 3610.0141
VAL 3620.0315
ASP 3630.0209
HIS 3640.0130
LYS 3650.0068
PRO 3660.0163
ASP 3670.0202
ARG 3680.0127
GLU 3690.0229
ASP 3700.0169
GLU 3710.0137
TYR 3720.0180
ALA 3730.0182
ARG 3740.0110
ILE 3750.0067
GLU 3760.0168
ASN 3770.0249
ALA 3780.0242
GLY 3790.0407
GLY 3800.0190
LYS 3810.0064
VAL 3820.0331
ILE 3830.0337
GLN 3840.0363
TRP 3850.0164
GLN 3860.0251
GLY 3870.0283
ALA 3880.0306
ARG 3890.0308
VAL 3900.0284
PHE 3910.0338
GLY 3920.0394
VAL 3930.0362
LEU 3940.0206
ALA 3950.0123
MET 3960.0054
SER 3970.0059
ARG 3980.0124
SER 3990.0121
ILE 4000.0153
GLY 4010.0159
ASP 4020.0188
ARG 4030.0241
TYR 4040.0112
LEU 4050.0202
LYS 4060.0374
PRO 4070.0413
TYR 4080.0223
VAL 4090.0100
ILE 4100.0079
PRO 4110.0112
GLU 4120.0121
PRO 4130.0096
GLU 4140.0203
VAL 4150.0149
THR 4160.0232
PHE 4170.0198
MET 4180.0232
PRO 4190.0205
ARG 4200.0113
SER 4210.0080
ARG 4220.0211
GLU 4230.0265
ASP 4240.0133
GLU 4250.0096
CYS 4260.0121
LEU 4270.0072
ILE 4280.0054
LEU 4290.0074
ALA 4300.0059
SER 4310.0066
ASP 4320.0104
GLY 4330.0100
LEU 4340.0089
TRP 4350.0095
ASP 4360.0071
VAL 4370.0050
MET 4380.0079
ASN 4390.0078
ASN 4400.0144
GLN 4410.0101
GLU 4420.0086
VAL 4430.0096
CYS 4440.0149
GLU 4450.0089
ILE 4460.0130
ALA 4470.0131
ARG 4480.0177
ARG 4490.0184
ARG 4500.0131
ILE 4510.0153
LEU 4520.0261
MET 4530.0251
TRP 4540.0181
HIS 4550.0135
LYS 4560.0251
LYS 4570.0245
ASN 4580.0142
GLY 4590.0194
ALA 4600.0221
PRO 4610.0240
PRO 4620.0241
LEU 4630.0195
ALA 4640.0223
GLU 4650.0313
ARG 4660.0136
GLY 4670.0099
LYS 4680.0266
GLY 4690.0240
ILE 4700.0180
ASP 4710.0064
PRO 4720.0157
ALA 4730.0096
CYS 4740.0104
GLN 4750.0191
ALA 4760.0138
ALA 4770.0124
ALA 4780.0239
ASP 4790.0257
TYR 4800.0133
LEU 4810.0129
SER 4820.0156
MET 4830.0169
LEU 4840.0132
ALA 4850.0063
LEU 4860.0109
GLN 4870.0236
LYS 4880.0095
GLY 4890.0056
SER 4900.0051
LYS 4910.0021
ASP 4920.0131
ASN 4930.0144
ILE 4940.0094
SER 4950.0081
ILE 4960.0154
ILE 4970.0170
VAL 4980.0110
ILE 4990.0097
ASP 5000.0061
LEU 5010.0076
LYS 5020.0015
ALA 5030.0023
GLN 5040.0131
ARG 5050.0057
LYS 5060.0207

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.