CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0527
CYS 1860.0098
ILE 1870.0170
PRO 1880.0091
LEU 1890.0086
TRP 1900.0086
GLY 1910.0094
THR 1920.0139
VAL 1930.0123
SER 1940.0093
ILE 1950.0079
GLN 1960.0081
GLY 1970.0102
ASN 1980.0056
ARG 1990.0072
SER 2000.0156
GLU 2010.0081
MET 2020.0069
GLU 2030.0081
ASP 2040.0066
ALA 2050.0031
PHE 2060.0079
ALA 2070.0112
VAL 2080.0198
SER 2090.0206
PRO 2100.0155
HIS 2110.0179
PHE 2120.0140
LEU 2130.0081
LYS 2140.0300
LEU 2150.0162
PRO 2160.0087
ILE 2170.0137
LYS 2180.0077
MET 2190.0100
LEU 2200.0070
LEU 2340.0133
THR 2350.0112
GLY 2360.0114
HIS 2370.0139
PHE 2380.0147
PHE 2390.0137
GLY 2400.0102
VAL 2410.0074
TYR 2420.0070
ASP 2430.0100
GLY 2440.0078
HIS 2450.0094
GLY 2460.0077
GLY 2470.0021
HIS 2480.0086
LYS 2490.0134
VAL 2500.0081
ALA 2510.0086
ASP 2520.0113
TYR 2530.0078
CYS 2540.0091
ARG 2550.0065
ASP 2560.0081
ARG 2570.0091
LEU 2580.0100
HIS 2590.0080
PHE 2600.0147
ALA 2610.0186
LEU 2620.0151
ALA 2630.0252
GLU 2640.0351
GLU 2650.0134
ILE 2660.0201
GLU 2670.0155
ARG 2680.0527
ARG 2820.0222
GLN 2830.0192
VAL 2840.0250
GLN 2850.0246
TRP 2860.0155
ASP 2870.0149
LYS 2880.0254
VAL 2890.0144
PHE 2900.0104
THR 2910.0100
SER 2920.0090
CYS 2930.0092
PHE 2940.0018
LEU 2950.0045
THR 2960.0119
VAL 2970.0057
ASP 2980.0056
GLY 2990.0038
GLU 3000.0079
ILE 3010.0034
GLU 3020.0055
GLY 3030.0105
LYS 3040.0052
ILE 3050.0298
GLY 3060.0277
ARG 3070.0242
ALA 3080.0246
VAL 3090.0249
VAL 3100.0421
SER 3120.0413
SER 3130.0481
ASP 3140.0400
LYS 3150.0152
VAL 3160.0280
LEU 3170.0388
GLU 3180.0260
ALA 3190.0140
VAL 3200.0112
ALA 3210.0128
SER 3220.0097
GLU 3230.0130
THR 3240.0151
VAL 3250.0125
GLY 3260.0104
SER 3270.0115
THR 3280.0131
ALA 3290.0088
VAL 3300.0057
VAL 3310.0064
ALA 3320.0128
LEU 3330.0121
VAL 3340.0107
CYS 3350.0085
SER 3360.0039
SER 3370.0081
HIS 3380.0088
ILE 3390.0116
VAL 3400.0148
VAL 3410.0107
SER 3420.0057
ASN 3430.0036
CYS 3440.0124
GLY 3450.0167
ASP 3460.0166
SER 3470.0130
ARG 3480.0078
ALA 3490.0047
VAL 3500.0060
LEU 3510.0047
PHE 3520.0087
ARG 3530.0082
GLY 3540.0193
LYS 3550.0111
GLU 3560.0096
ALA 3570.0166
MET 3580.0120
PRO 3590.0136
LEU 3600.0078
SER 3610.0052
VAL 3620.0118
ASP 3630.0179
HIS 3640.0173
LYS 3650.0179
PRO 3660.0034
ASP 3670.0064
ARG 3680.0282
GLU 3690.0246
ASP 3700.0085
GLU 3710.0105
TYR 3720.0088
ALA 3730.0063
ARG 3740.0104
ILE 3750.0105
GLU 3760.0101
ASN 3770.0067
ALA 3780.0160
GLY 3790.0199
GLY 3800.0275
LYS 3810.0121
VAL 3820.0195
ILE 3830.0212
GLN 3840.0458
TRP 3850.0360
GLN 3860.0355
GLY 3870.0519
ALA 3880.0326
ARG 3890.0301
VAL 3900.0168
PHE 3910.0132
GLY 3920.0274
VAL 3930.0278
LEU 3940.0150
ALA 3950.0176
MET 3960.0149
SER 3970.0153
ARG 3980.0203
SER 3990.0173
ILE 4000.0096
GLY 4010.0089
ASP 4020.0121
ARG 4030.0077
TYR 4040.0191
LEU 4050.0189
LYS 4060.0186
PRO 4070.0276
TYR 4080.0218
VAL 4090.0234
ILE 4100.0272
PRO 4110.0172
GLU 4120.0168
PRO 4130.0055
GLU 4140.0022
VAL 4150.0071
THR 4160.0135
PHE 4170.0137
MET 4180.0159
PRO 4190.0105
ARG 4200.0099
SER 4210.0178
ARG 4220.0373
GLU 4230.0316
ASP 4240.0055
GLU 4250.0020
CYS 4260.0050
LEU 4270.0036
ILE 4280.0015
LEU 4290.0029
ALA 4300.0091
SER 4310.0113
ASP 4320.0149
GLY 4330.0136
LEU 4340.0126
TRP 4350.0125
ASP 4360.0173
VAL 4370.0178
MET 4380.0180
ASN 4390.0181
ASN 4400.0195
GLN 4410.0138
GLU 4420.0107
VAL 4430.0151
CYS 4440.0185
GLU 4450.0149
ILE 4460.0249
ALA 4470.0224
ARG 4480.0176
ARG 4490.0212
ARG 4500.0150
ILE 4510.0110
LEU 4520.0108
MET 4530.0122
TRP 4540.0103
HIS 4550.0116
LYS 4560.0290
LYS 4570.0265
ASN 4580.0084
GLY 4590.0143
ALA 4600.0257
PRO 4610.0155
PRO 4620.0226
LEU 4630.0266
ALA 4640.0366
GLU 4650.0250
ARG 4660.0153
GLY 4670.0170
LYS 4680.0125
GLY 4690.0100
ILE 4700.0114
ASP 4710.0054
PRO 4720.0098
ALA 4730.0081
CYS 4740.0046
GLN 4750.0076
ALA 4760.0043
ALA 4770.0102
ALA 4780.0134
ASP 4790.0112
TYR 4800.0187
LEU 4810.0153
SER 4820.0098
MET 4830.0106
LEU 4840.0080
ALA 4850.0094
LEU 4860.0101
GLN 4870.0046
LYS 4880.0086
GLY 4890.0139
SER 4900.0161
LYS 4910.0049
ASP 4920.0070
ASN 4930.0101
ILE 4940.0053
SER 4950.0081
ILE 4960.0062
ILE 4970.0081
VAL 4980.0066
ILE 4990.0036
ASP 5000.0081
LEU 5010.0071
LYS 5020.0150
ALA 5030.0161
GLN 5040.0486
ARG 5050.0327
LYS 5060.0397

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.