CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0751
CYS 1860.0063
ILE 1870.0061
PRO 1880.0032
LEU 1890.0033
TRP 1900.0033
GLY 1910.0058
THR 1920.0063
VAL 1930.0081
SER 1940.0074
ILE 1950.0088
GLN 1960.0101
GLY 1970.0119
ASN 1980.0144
ARG 1990.0141
SER 2000.0148
GLU 2010.0117
MET 2020.0092
GLU 2030.0094
ASP 2040.0086
ALA 2050.0080
PHE 2060.0071
ALA 2070.0058
VAL 2080.0039
SER 2090.0025
PRO 2100.0014
HIS 2110.0032
PHE 2120.0017
LEU 2130.0043
LYS 2140.0076
LEU 2150.0090
PRO 2160.0130
ILE 2170.0122
LYS 2180.0126
MET 2190.0107
LEU 2200.0128
LEU 2340.0094
THR 2350.0067
GLY 2360.0050
HIS 2370.0023
PHE 2380.0040
PHE 2390.0051
GLY 2400.0071
VAL 2410.0077
TYR 2420.0087
ASP 2430.0088
GLY 2440.0091
HIS 2450.0100
GLY 2460.0109
GLY 2470.0114
HIS 2480.0105
LYS 2490.0113
VAL 2500.0110
ALA 2510.0097
ASP 2520.0095
TYR 2530.0105
CYS 2540.0095
ARG 2550.0088
ASP 2560.0091
ARG 2570.0092
LEU 2580.0092
HIS 2590.0076
PHE 2600.0079
ALA 2610.0090
LEU 2620.0078
ALA 2630.0050
GLU 2640.0072
GLU 2650.0113
ILE 2660.0107
GLU 2670.0183
ARG 2680.0549
ARG 2820.0157
GLN 2830.0142
VAL 2840.0149
GLN 2850.0113
TRP 2860.0088
ASP 2870.0103
LYS 2880.0104
VAL 2890.0089
PHE 2900.0089
THR 2910.0103
SER 2920.0115
CYS 2930.0104
PHE 2940.0114
LEU 2950.0126
THR 2960.0123
VAL 2970.0120
ASP 2980.0136
GLY 2990.0141
GLU 3000.0123
ILE 3010.0135
GLU 3020.0158
GLY 3030.0163
LYS 3040.0162
ILE 3050.0121
GLY 3060.0106
ARG 3070.0040
ALA 3080.0249
VAL 3090.0394
VAL 3100.0750
SER 3120.0718
SER 3130.0751
ASP 3140.0522
LYS 3150.0264
VAL 3160.0070
LEU 3170.0097
GLU 3180.0136
ALA 3190.0165
VAL 3200.0141
ALA 3210.0129
SER 3220.0133
GLU 3230.0118
THR 3240.0100
VAL 3250.0109
GLY 3260.0109
SER 3270.0101
THR 3280.0092
ALA 3290.0099
VAL 3300.0086
VAL 3310.0082
ALA 3320.0064
LEU 3330.0052
VAL 3340.0038
CYS 3350.0051
SER 3360.0060
SER 3370.0075
HIS 3380.0069
ILE 3390.0060
VAL 3400.0068
VAL 3410.0077
SER 3420.0087
ASN 3430.0089
CYS 3440.0092
GLY 3450.0074
ASP 3460.0075
SER 3470.0096
ARG 3480.0088
ALA 3490.0083
VAL 3500.0081
LEU 3510.0067
PHE 3520.0062
ARG 3530.0061
GLY 3540.0055
LYS 3550.0069
GLU 3560.0088
ALA 3570.0090
MET 3580.0095
PRO 3590.0098
LEU 3600.0086
SER 3610.0092
VAL 3620.0065
ASP 3630.0056
HIS 3640.0018
LYS 3650.0095
PRO 3660.0218
ASP 3670.0325
ARG 3680.0249
GLU 3690.0361
ASP 3700.0332
GLU 3710.0236
TYR 3720.0355
ALA 3730.0447
ARG 3740.0353
ILE 3750.0309
GLU 3760.0459
ASN 3770.0524
ALA 3780.0421
GLY 3790.0435
GLY 3800.0354
LYS 3810.0404
VAL 3820.0403
ILE 3830.0494
GLN 3840.0587
TRP 3850.0592
GLN 3860.0625
GLY 3870.0567
ALA 3880.0411
ARG 3890.0311
VAL 3900.0234
PHE 3910.0310
GLY 3920.0389
VAL 3930.0299
LEU 3940.0174
ALA 3950.0208
MET 3960.0068
SER 3970.0052
ARG 3980.0048
SER 3990.0089
ILE 4000.0112
GLY 4010.0117
ASP 4020.0094
ARG 4030.0110
TYR 4040.0065
LEU 4050.0044
LYS 4060.0121
PRO 4070.0178
TYR 4080.0164
VAL 4090.0069
ILE 4100.0096
PRO 4110.0126
GLU 4120.0109
PRO 4130.0098
GLU 4140.0096
VAL 4150.0084
THR 4160.0102
PHE 4170.0091
MET 4180.0090
PRO 4190.0088
ARG 4200.0071
SER 4210.0072
ARG 4220.0067
GLU 4230.0054
ASP 4240.0041
GLU 4250.0022
CYS 4260.0033
LEU 4270.0048
ILE 4280.0063
LEU 4290.0071
ALA 4300.0074
SER 4310.0084
ASP 4320.0090
GLY 4330.0086
LEU 4340.0098
TRP 4350.0107
ASP 4360.0124
VAL 4370.0132
MET 4380.0129
ASN 4390.0125
ASN 4400.0107
GLN 4410.0106
GLU 4420.0112
VAL 4430.0098
CYS 4440.0078
GLU 4450.0082
ILE 4460.0096
ALA 4470.0076
ARG 4480.0056
ARG 4490.0080
ARG 4500.0095
ILE 4510.0073
LEU 4520.0077
MET 4530.0112
TRP 4540.0120
HIS 4550.0108
LYS 4560.0134
LYS 4570.0170
ASN 4580.0166
GLY 4590.0147
ALA 4600.0153
PRO 4610.0150
PRO 4620.0190
LEU 4630.0171
ALA 4640.0196
GLU 4650.0155
ARG 4660.0107
GLY 4670.0066
LYS 4680.0070
GLY 4690.0081
ILE 4700.0070
ASP 4710.0072
PRO 4720.0104
ALA 4730.0086
CYS 4740.0062
GLN 4750.0083
ALA 4760.0105
ALA 4770.0091
ALA 4780.0087
ASP 4790.0108
TYR 4800.0116
LEU 4810.0110
SER 4820.0109
MET 4830.0128
LEU 4840.0131
ALA 4850.0127
LEU 4860.0137
GLN 4870.0157
LYS 4880.0160
GLY 4890.0164
SER 4900.0127
LYS 4910.0139
ASP 4920.0122
ASN 4930.0102
ILE 4940.0094
SER 4950.0077
ILE 4960.0074
ILE 4970.0058
VAL 4980.0051
ILE 4990.0026
ASP 5000.0017
LEU 5010.0018
LYS 5020.0033
ALA 5030.0066
GLN 5040.0077
ARG 5050.0071
LYS 5060.0094

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.