CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 94  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0603
CYS 1860.0197
ILE 1870.0180
PRO 1880.0099
LEU 1890.0065
TRP 1900.0096
GLY 1910.0073
THR 1920.0084
VAL 1930.0139
SER 1940.0135
ILE 1950.0148
GLN 1960.0157
GLY 1970.0153
ASN 1980.0076
ARG 1990.0118
SER 2000.0286
GLU 2010.0143
MET 2020.0064
GLU 2030.0073
ASP 2040.0056
ALA 2050.0057
PHE 2060.0091
ALA 2070.0118
VAL 2080.0162
SER 2090.0134
PRO 2100.0169
HIS 2110.0097
PHE 2120.0085
LEU 2130.0070
LYS 2140.0356
LEU 2150.0138
PRO 2160.0128
ILE 2170.0413
LYS 2180.0335
MET 2190.0176
LEU 2200.0171
LEU 2340.0174
THR 2350.0098
GLY 2360.0080
HIS 2370.0156
PHE 2380.0145
PHE 2390.0149
GLY 2400.0138
VAL 2410.0129
TYR 2420.0130
ASP 2430.0148
GLY 2440.0162
HIS 2450.0201
GLY 2460.0174
GLY 2470.0163
HIS 2480.0170
LYS 2490.0179
VAL 2500.0103
ALA 2510.0105
ASP 2520.0119
TYR 2530.0101
CYS 2540.0144
ARG 2550.0147
ASP 2560.0207
ARG 2570.0198
LEU 2580.0083
HIS 2590.0117
PHE 2600.0252
ALA 2610.0219
LEU 2620.0107
ALA 2630.0181
GLU 2640.0299
GLU 2650.0177
ILE 2660.0170
GLU 2670.0380
ARG 2680.0423
ARG 2820.0276
GLN 2830.0136
VAL 2840.0228
GLN 2850.0189
TRP 2860.0120
ASP 2870.0124
LYS 2880.0156
VAL 2890.0124
PHE 2900.0163
THR 2910.0204
SER 2920.0080
CYS 2930.0076
PHE 2940.0160
LEU 2950.0208
THR 2960.0141
VAL 2970.0093
ASP 2980.0183
GLY 2990.0102
GLU 3000.0109
ILE 3010.0105
GLU 3020.0164
GLY 3030.0185
LYS 3040.0193
ILE 3050.0118
GLY 3060.0097
ARG 3070.0029
ALA 3080.0111
VAL 3090.0104
VAL 3100.0069
SER 3120.0115
SER 3130.0111
ASP 3140.0057
LYS 3150.0056
VAL 3160.0077
LEU 3170.0134
GLU 3180.0137
ALA 3190.0163
VAL 3200.0058
ALA 3210.0080
SER 3220.0245
GLU 3230.0193
THR 3240.0198
VAL 3250.0137
GLY 3260.0227
SER 3270.0211
THR 3280.0181
ALA 3290.0154
VAL 3300.0146
VAL 3310.0145
ALA 3320.0160
LEU 3330.0159
VAL 3340.0219
CYS 3350.0267
SER 3360.0485
SER 3370.0398
HIS 3380.0319
ILE 3390.0174
VAL 3400.0133
VAL 3410.0072
SER 3420.0138
ASN 3430.0120
CYS 3440.0141
GLY 3450.0157
ASP 3460.0235
SER 3470.0183
ARG 3480.0084
ALA 3490.0096
VAL 3500.0145
LEU 3510.0189
PHE 3520.0250
ARG 3530.0246
GLY 3540.0188
LYS 3550.0219
GLU 3560.0192
ALA 3570.0211
MET 3580.0170
PRO 3590.0143
LEU 3600.0115
SER 3610.0153
VAL 3620.0435
ASP 3630.0341
HIS 3640.0180
LYS 3650.0185
PRO 3660.0100
ASP 3670.0085
ARG 3680.0180
GLU 3690.0251
ASP 3700.0262
GLU 3710.0124
TYR 3720.0114
ALA 3730.0141
ARG 3740.0032
ILE 3750.0069
GLU 3760.0169
ASN 3770.0155
ALA 3780.0091
GLY 3790.0120
GLY 3800.0188
LYS 3810.0166
VAL 3820.0069
ILE 3830.0024
GLN 3840.0150
TRP 3850.0160
GLN 3860.0117
GLY 3870.0244
ALA 3880.0141
ARG 3890.0116
VAL 3900.0068
PHE 3910.0117
GLY 3920.0111
VAL 3930.0156
LEU 3940.0038
ALA 3950.0046
MET 3960.0126
SER 3970.0067
ARG 3980.0150
SER 3990.0252
ILE 4000.0233
GLY 4010.0225
ASP 4020.0149
ARG 4030.0166
TYR 4040.0071
LEU 4050.0130
LYS 4060.0196
PRO 4070.0267
TYR 4080.0186
VAL 4090.0247
ILE 4100.0348
PRO 4110.0367
GLU 4120.0432
PRO 4130.0178
GLU 4140.0208
VAL 4150.0158
THR 4160.0100
PHE 4170.0190
MET 4180.0298
PRO 4190.0428
ARG 4200.0139
SER 4210.0142
ARG 4220.0603
GLU 4230.0387
ASP 4240.0231
GLU 4250.0157
CYS 4260.0165
LEU 4270.0125
ILE 4280.0146
LEU 4290.0113
ALA 4300.0119
SER 4310.0103
ASP 4320.0135
GLY 4330.0081
LEU 4340.0072
TRP 4350.0091
ASP 4360.0166
VAL 4370.0198
MET 4380.0105
ASN 4390.0151
ASN 4400.0103
GLN 4410.0138
GLU 4420.0206
VAL 4430.0218
CYS 4440.0220
GLU 4450.0233
ILE 4460.0212
ALA 4470.0218
ARG 4480.0134
ARG 4490.0073
ARG 4500.0090
ILE 4510.0144
LEU 4520.0213
MET 4530.0217
TRP 4540.0237
HIS 4550.0202
LYS 4560.0278
LYS 4570.0286
ASN 4580.0249
GLY 4590.0171
ALA 4600.0208
PRO 4610.0207
PRO 4620.0191
LEU 4630.0217
ALA 4640.0249
GLU 4650.0250
ARG 4660.0112
GLY 4670.0121
LYS 4680.0319
GLY 4690.0380
ILE 4700.0134
ASP 4710.0093
PRO 4720.0123
ALA 4730.0154
CYS 4740.0091
GLN 4750.0066
ALA 4760.0046
ALA 4770.0074
ALA 4780.0111
ASP 4790.0131
TYR 4800.0100
LEU 4810.0087
SER 4820.0140
MET 4830.0176
LEU 4840.0163
ALA 4850.0198
LEU 4860.0192
GLN 4870.0224
LYS 4880.0388
GLY 4890.0445
SER 4900.0130
LYS 4910.0108
ASP 4920.0030
ASN 4930.0040
ILE 4940.0058
SER 4950.0093
ILE 4960.0106
ILE 4970.0104
VAL 4980.0061
ILE 4990.0075
ASP 5000.0068
LEU 5010.0130
LYS 5020.0176
ALA 5030.0182
GLN 5040.0159
ARG 5050.0129
LYS 5060.0211

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.