CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SIGNALING PROTEIN 20-OCT-09 3KB3  ***

<R2> analysis for 2602031626281395717

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0815
CYS 1860.0070
ILE 1870.0036
PRO 1880.0030
LEU 1890.0020
TRP 1900.0058
GLY 1910.0061
THR 1920.0104
VAL 1930.0094
SER 1940.0214
ILE 1950.0205
GLN 1960.0383
GLY 1970.0293
ASN 1980.0398
ARG 1990.0176
SER 2000.0135
GLU 2010.0179
MET 2020.0186
GLU 2030.0267
ASP 2040.0204
ALA 2050.0205
PHE 2060.0138
ALA 2070.0161
VAL 2080.0083
SER 2090.0088
PRO 2100.0058
HIS 2110.0054
PHE 2120.0061
LEU 2130.0055
LYS 2140.0058
LEU 2150.0047
PRO 2160.0083
ILE 2170.0071
LYS 2180.0023
MET 2190.0049
LEU 2200.0125
LEU 2340.0061
THR 2350.0061
GLY 2360.0039
HIS 2370.0041
PHE 2380.0040
PHE 2390.0012
GLY 2400.0061
VAL 2410.0035
TYR 2420.0109
ASP 2430.0104
GLY 2440.0129
HIS 2450.0119
GLY 2460.0198
GLY 2470.0198
HIS 2480.0344
LYS 2490.0175
VAL 2500.0128
ALA 2510.0168
ASP 2520.0258
TYR 2530.0173
CYS 2540.0221
ARG 2550.0254
ASP 2560.0314
ARG 2570.0198
LEU 2580.0176
HIS 2590.0171
PHE 2600.0236
ALA 2610.0125
LEU 2620.0104
ALA 2630.0100
GLU 2640.0150
GLU 2650.0085
ILE 2660.0033
GLU 2670.0085
ARG 2680.0068
ARG 2820.0040
GLN 2830.0082
VAL 2840.0188
GLN 2850.0097
TRP 2860.0021
ASP 2870.0028
LYS 2880.0053
VAL 2890.0065
PHE 2900.0075
THR 2910.0076
SER 2920.0122
CYS 2930.0109
PHE 2940.0104
LEU 2950.0129
THR 2960.0163
VAL 2970.0156
ASP 2980.0173
GLY 2990.0122
GLU 3000.0120
ILE 3010.0130
GLU 3020.0188
GLY 3030.0105
LYS 3040.0119
ILE 3050.0187
GLY 3060.0138
ARG 3070.0100
ALA 3080.0081
VAL 3090.0133
VAL 3100.0308
SER 3120.0357
SER 3130.0240
ASP 3140.0169
LYS 3150.0081
VAL 3160.0157
LEU 3170.0147
GLU 3180.0090
ALA 3190.0148
VAL 3200.0195
ALA 3210.0247
SER 3220.0235
GLU 3230.0321
THR 3240.0181
VAL 3250.0184
GLY 3260.0098
SER 3270.0085
THR 3280.0073
ALA 3290.0059
VAL 3300.0040
VAL 3310.0019
ALA 3320.0055
LEU 3330.0051
VAL 3340.0091
CYS 3350.0088
SER 3360.0089
SER 3370.0062
HIS 3380.0041
ILE 3390.0075
VAL 3400.0053
VAL 3410.0055
SER 3420.0052
ASN 3430.0065
CYS 3440.0090
GLY 3450.0099
ASP 3460.0118
SER 3470.0094
ARG 3480.0092
ALA 3490.0076
VAL 3500.0073
LEU 3510.0058
PHE 3520.0091
ARG 3530.0111
GLY 3540.0184
LYS 3550.0098
GLU 3560.0019
ALA 3570.0132
MET 3580.0088
PRO 3590.0079
LEU 3600.0058
SER 3610.0074
VAL 3620.0140
ASP 3630.0140
HIS 3640.0126
LYS 3650.0199
PRO 3660.0322
ASP 3670.0349
ARG 3680.0599
GLU 3690.0815
ASP 3700.0371
GLU 3710.0388
TYR 3720.0509
ALA 3730.0210
ARG 3740.0339
ILE 3750.0323
GLU 3760.0467
ASN 3770.0770
ALA 3780.0512
GLY 3790.0454
GLY 3800.0361
LYS 3810.0261
VAL 3820.0144
ILE 3830.0151
GLN 3840.0121
TRP 3850.0158
GLN 3860.0226
GLY 3870.0511
ALA 3880.0160
ARG 3890.0170
VAL 3900.0177
PHE 3910.0187
GLY 3920.0128
VAL 3930.0147
LEU 3940.0263
ALA 3950.0307
MET 3960.0132
SER 3970.0178
ARG 3980.0101
SER 3990.0119
ILE 4000.0126
GLY 4010.0131
ASP 4020.0278
ARG 4030.0297
TYR 4040.0434
LEU 4050.0335
LYS 4060.0257
PRO 4070.0091
TYR 4080.0194
VAL 4090.0128
ILE 4100.0127
PRO 4110.0130
GLU 4120.0082
PRO 4130.0082
GLU 4140.0076
VAL 4150.0050
THR 4160.0089
PHE 4170.0088
MET 4180.0112
PRO 4190.0084
ARG 4200.0076
SER 4210.0152
ARG 4220.0108
GLU 4230.0118
ASP 4240.0073
GLU 4250.0063
CYS 4260.0059
LEU 4270.0070
ILE 4280.0101
LEU 4290.0097
ALA 4300.0097
SER 4310.0080
ASP 4320.0164
GLY 4330.0154
LEU 4340.0141
TRP 4350.0134
ASP 4360.0170
VAL 4370.0141
MET 4380.0052
ASN 4390.0094
ASN 4400.0119
GLN 4410.0118
GLU 4420.0126
VAL 4430.0080
CYS 4440.0133
GLU 4450.0134
ILE 4460.0177
ALA 4470.0120
ARG 4480.0071
ARG 4490.0162
ARG 4500.0075
ILE 4510.0050
LEU 4520.0117
MET 4530.0039
TRP 4540.0113
HIS 4550.0106
LYS 4560.0103
LYS 4570.0066
ASN 4580.0032
GLY 4590.0111
ALA 4600.0181
PRO 4610.0126
PRO 4620.0149
LEU 4630.0098
ALA 4640.0154
GLU 4650.0087
ARG 4660.0034
GLY 4670.0006
LYS 4680.0087
GLY 4690.0019
ILE 4700.0023
ASP 4710.0020
PRO 4720.0086
ALA 4730.0081
CYS 4740.0027
GLN 4750.0039
ALA 4760.0057
ALA 4770.0083
ALA 4780.0078
ASP 4790.0104
TYR 4800.0128
LEU 4810.0111
SER 4820.0121
MET 4830.0167
LEU 4840.0238
ALA 4850.0158
LEU 4860.0127
GLN 4870.0321
LYS 4880.0314
GLY 4890.0210
SER 4900.0309
LYS 4910.0210
ASP 4920.0129
ASN 4930.0171
ILE 4940.0071
SER 4950.0082
ILE 4960.0082
ILE 4970.0097
VAL 4980.0078
ILE 4990.0071
ASP 5000.0077
LEU 5010.0116
LYS 5020.0154
ALA 5030.0189
GLN 5040.0316
ARG 5050.0151
LYS 5060.0391

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.