Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.1171
GLN -7
0.0013
GLN -6
0.0032
MET -5
0.0090
GLY -4
0.0335
ARG -3
0.0057
GLY -2
0.0119
SER -1
0.0307
MET 0
0.0082
MET 0
0.0084
CYS 1
0.0092
CYS 1
0.0094
ASP 2
0.0200
ALA 3
0.0084
PHE 4
0.0057
VAL 5
0.0078
GLY 6
0.0040
THR 7
0.0068
TRP 8
0.0050
LYS 9
0.0160
LEU 10
0.0155
VAL 11
0.0354
SER 12
0.0826
SER 13
0.0350
GLU 14
0.0185
GLU 14
0.0155
ASN 15
0.0118
ASN 15
0.0120
PHE 16
0.0132
ASP 17
0.0102
ASP 18
0.0109
TYR 19
0.0044
MET 20
0.0107
LYS 21
0.0212
GLU 22
0.0147
VAL 23
0.0091
GLY 24
0.0319
VAL 25
0.0111
GLY 26
0.0342
PHE 27
0.0289
ALA 28
0.0378
THR 29
0.0194
ARG 30
0.0201
LYS 31
0.0504
VAL 32
0.0243
VAL 32
0.0249
ALA 33
0.0048
GLY 34
0.0141
MET 35
0.0317
ALA 36
0.0258
LYS 37
0.0567
PRO 38
0.0221
ASN 39
0.0186
MET 40
0.0140
ILE 41
0.0087
ILE 42
0.0069
SER 43
0.0137
VAL 44
0.0116
ASN 45
0.0393
GLY 46
0.1171
ASP 47
0.0249
VAL 48
0.0409
ILE 49
0.0189
THR 50
0.0246
ILE 51
0.0176
LYS 52
0.0191
SER 53
0.0147
GLU 54
0.0109
SER 55
0.0127
SER 55
0.0129
THR 56
0.0215
THR 56
0.0211
PHE 57
0.0247
PHE 57
0.0241
LYS 58
0.0086
LYS 58
0.0103
ASN 59
0.0233
THR 60
0.0205
GLU 61
0.0350
ILE 62
0.0208
SER 63
0.0305
PHE 64
0.0185
ILE 65
0.0156
LEU 66
0.0083
GLY 67
0.0231
GLN 68
0.0187
GLU 69
0.0430
PHE 70
0.0138
ASP 71
0.0156
GLU 72
0.0221
VAL 73
0.0096
VAL 73
0.0099
THR 74
0.0096
ALA 75
0.0161
ASP 76
0.0053
ASP 77
0.0371
ARG 78
0.0194
LYS 79
0.0256
VAL 80
0.0232
LYS 81
0.0223
SER 82
0.0072
THR 83
0.0102
ILE 84
0.0176
THR 85
0.0282
LEU 86
0.0172
LEU 86
0.0149
ASP 87
0.0114
ASP 87
0.0098
GLY 88
0.0486
GLY 88
0.0553
GLY 89
0.0114
GLY 89
0.0071
VAL 90
0.0137
LEU 91
0.0138
VAL 92
0.0296
HIS 93
0.0165
VAL 94
0.0103
GLN 95
0.0097
LYS 96
0.0205
TRP 97
0.0101
ASP 98
0.0201
ASP 98
0.0194
GLY 99
0.0515
LYS 100
0.0143
SER 101
0.0133
THR 102
0.0061
THR 103
0.0169
ILE 104
0.0158
LYS 105
0.0241
ARG 106
0.0168
LYS 107
0.0078
ARG 108
0.0126
GLU 109
0.0089
ASP 110
0.0131
ASP 111
0.0169
LYS 112
0.0057
LEU 113
0.0040
LEU 113
0.0040
VAL 114
0.0144
VAL 115
0.0328
GLU 116
0.0361
GLU 116
0.0357
CYS 117
0.0089
VAL 118
0.0115
MET 119
0.0065
MET 119
0.0059
LYS 120
0.0098
LYS 120
0.0122
GLY 121
0.0137
GLY 121
0.0162
VAL 122
0.0085
THR 123
0.0057
SER 124
0.0088
THR 125
0.0071
ARG 126
0.0238
VAL 127
0.0210
TYR 128
0.0087
GLU 129
0.0092
GLU 129
0.0088
ARG 130
0.0135
ALA 131
0.0552
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.