Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.1334
GLN -7
0.1334
GLN -6
0.0873
MET -5
0.1073
GLY -4
0.0884
ARG -3
0.0790
GLY -2
0.0600
SER -1
0.0325
MET 0
0.0125
MET 0
0.0126
CYS 1
0.0075
CYS 1
0.0076
ASP 2
0.0117
ALA 3
0.0092
PHE 4
0.0050
VAL 5
0.0066
GLY 6
0.0122
THR 7
0.0147
TRP 8
0.0132
LYS 9
0.0129
LEU 10
0.0090
VAL 11
0.0087
SER 12
0.0076
SER 13
0.0115
GLU 14
0.0180
GLU 14
0.0182
ASN 15
0.0183
ASN 15
0.0184
PHE 16
0.0114
ASP 17
0.0147
ASP 18
0.0125
TYR 19
0.0070
MET 20
0.0043
LYS 21
0.0053
GLU 22
0.0068
VAL 23
0.0093
GLY 24
0.0119
VAL 25
0.0144
GLY 26
0.0267
PHE 27
0.0340
ALA 28
0.0364
THR 29
0.0210
ARG 30
0.0174
LYS 31
0.0249
VAL 32
0.0175
VAL 32
0.0175
ALA 33
0.0098
GLY 34
0.0123
MET 35
0.0122
ALA 36
0.0045
LYS 37
0.0047
PRO 38
0.0096
ASN 39
0.0119
MET 40
0.0117
ILE 41
0.0122
ILE 42
0.0086
SER 43
0.0111
VAL 44
0.0144
ASN 45
0.0505
GLY 46
0.0750
ASP 47
0.0621
VAL 48
0.0377
ILE 49
0.0165
THR 50
0.0144
ILE 51
0.0093
LYS 52
0.0111
SER 53
0.0101
GLU 54
0.0095
SER 55
0.0043
SER 55
0.0035
THR 56
0.0048
THR 56
0.0051
PHE 57
0.0084
PHE 57
0.0087
LYS 58
0.0090
LYS 58
0.0088
ASN 59
0.0075
THR 60
0.0075
GLU 61
0.0087
ILE 62
0.0109
SER 63
0.0183
PHE 64
0.0199
ILE 65
0.0289
LEU 66
0.0251
GLY 67
0.0273
GLN 68
0.0237
GLU 69
0.0093
PHE 70
0.0061
ASP 71
0.0073
GLU 72
0.0067
VAL 73
0.0093
VAL 73
0.0087
THR 74
0.0077
ALA 75
0.0078
ASP 76
0.0100
ASP 77
0.0102
ARG 78
0.0139
LYS 79
0.0170
VAL 80
0.0124
LYS 81
0.0087
SER 82
0.0031
THR 83
0.0090
ILE 84
0.0127
THR 85
0.0173
LEU 86
0.0139
LEU 86
0.0150
ASP 87
0.0194
ASP 87
0.0205
GLY 88
0.0206
GLY 88
0.0217
GLY 89
0.0153
GLY 89
0.0147
VAL 90
0.0112
LEU 91
0.0068
VAL 92
0.0078
HIS 93
0.0045
VAL 94
0.0076
GLN 95
0.0097
LYS 96
0.0186
TRP 97
0.0254
ASP 98
0.0416
ASP 98
0.0413
GLY 99
0.0445
LYS 100
0.0314
SER 101
0.0226
THR 102
0.0135
THR 103
0.0082
ILE 104
0.0047
LYS 105
0.0028
ARG 106
0.0009
LYS 107
0.0070
ARG 108
0.0111
GLU 109
0.0168
ASP 110
0.0232
ASP 111
0.0206
LYS 112
0.0130
LEU 113
0.0071
LEU 113
0.0071
VAL 114
0.0029
VAL 115
0.0042
GLU 116
0.0073
GLU 116
0.0072
CYS 117
0.0080
VAL 118
0.0124
MET 119
0.0149
MET 119
0.0165
LYS 120
0.0239
LYS 120
0.0239
GLY 121
0.0264
GLY 121
0.0266
VAL 122
0.0183
THR 123
0.0165
SER 124
0.0121
THR 125
0.0107
ARG 126
0.0065
VAL 127
0.0044
TYR 128
0.0084
GLU 129
0.0138
GLU 129
0.0136
ARG 130
0.0179
ALA 131
0.0202
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.