Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0718
GLN -7
0.0029
GLN -6
0.0109
MET -5
0.0109
GLY -4
0.0329
ARG -3
0.0332
GLY -2
0.0718
SER -1
0.0269
MET 0
0.0464
MET 0
0.0472
CYS 1
0.0073
CYS 1
0.0079
ASP 2
0.0318
ALA 3
0.0313
PHE 4
0.0214
VAL 5
0.0261
GLY 6
0.0165
THR 7
0.0119
TRP 8
0.0120
LYS 9
0.0166
LEU 10
0.0089
VAL 11
0.0161
SER 12
0.0178
SER 13
0.0250
GLU 14
0.0337
GLU 14
0.0323
ASN 15
0.0334
ASN 15
0.0334
PHE 16
0.0337
ASP 17
0.0179
ASP 18
0.0167
TYR 19
0.0186
MET 20
0.0142
LYS 21
0.0111
GLU 22
0.0128
VAL 23
0.0092
GLY 24
0.0095
VAL 25
0.0104
GLY 26
0.0256
PHE 27
0.0318
ALA 28
0.0362
THR 29
0.0208
ARG 30
0.0159
LYS 31
0.0230
VAL 32
0.0348
VAL 32
0.0349
ALA 33
0.0205
GLY 34
0.0234
MET 35
0.0293
ALA 36
0.0148
LYS 37
0.0109
PRO 38
0.0174
ASN 39
0.0174
MET 40
0.0048
ILE 41
0.0128
ILE 42
0.0195
SER 43
0.0369
VAL 44
0.0272
ASN 45
0.0218
GLY 46
0.0635
ASP 47
0.0324
VAL 48
0.0105
ILE 49
0.0138
THR 50
0.0233
ILE 51
0.0122
LYS 52
0.0166
SER 53
0.0251
GLU 54
0.0280
SER 55
0.0189
SER 55
0.0184
THR 56
0.0152
THR 56
0.0154
PHE 57
0.0181
PHE 57
0.0200
LYS 58
0.0230
LYS 58
0.0224
ASN 59
0.0208
THR 60
0.0198
GLU 61
0.0109
ILE 62
0.0136
SER 63
0.0156
PHE 64
0.0039
ILE 65
0.0135
LEU 66
0.0081
GLY 67
0.0061
GLN 68
0.0126
GLU 69
0.0089
PHE 70
0.0066
ASP 71
0.0083
GLU 72
0.0100
VAL 73
0.0118
VAL 73
0.0129
THR 74
0.0189
ALA 75
0.0311
ASP 76
0.0240
ASP 77
0.0225
ARG 78
0.0072
LYS 79
0.0142
VAL 80
0.0127
LYS 81
0.0128
SER 82
0.0128
THR 83
0.0088
ILE 84
0.0093
THR 85
0.0078
LEU 86
0.0090
LEU 86
0.0085
ASP 87
0.0099
ASP 87
0.0107
GLY 88
0.0109
GLY 88
0.0116
GLY 89
0.0036
GLY 89
0.0044
VAL 90
0.0073
LEU 91
0.0088
VAL 92
0.0113
HIS 93
0.0103
VAL 94
0.0073
GLN 95
0.0108
LYS 96
0.0160
TRP 97
0.0186
ASP 98
0.0176
ASP 98
0.0180
GLY 99
0.0165
LYS 100
0.0111
SER 101
0.0161
THR 102
0.0173
THR 103
0.0137
ILE 104
0.0063
LYS 105
0.0104
ARG 106
0.0100
LYS 107
0.0137
ARG 108
0.0284
GLU 109
0.0639
ASP 110
0.0658
ASP 111
0.0204
LYS 112
0.0220
LEU 113
0.0210
LEU 113
0.0210
VAL 114
0.0283
VAL 115
0.0089
GLU 116
0.0136
GLU 116
0.0135
CYS 117
0.0238
VAL 118
0.0297
MET 119
0.0251
MET 119
0.0261
LYS 120
0.0354
LYS 120
0.0350
GLY 121
0.0304
GLY 121
0.0306
VAL 122
0.0231
THR 123
0.0317
SER 124
0.0263
THR 125
0.0157
ARG 126
0.0107
VAL 127
0.0165
TYR 128
0.0189
GLU 129
0.0274
GLU 129
0.0276
ARG 130
0.0265
ALA 131
0.0473
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.