Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.1296
GLN -7
0.0292
GLN -6
0.0124
MET -5
0.0327
GLY -4
0.1296
ARG -3
0.0308
GLY -2
0.0364
SER -1
0.0300
MET 0
0.0369
MET 0
0.0382
CYS 1
0.0119
CYS 1
0.0117
ASP 2
0.0212
ALA 3
0.0180
PHE 4
0.0130
VAL 5
0.0197
GLY 6
0.0146
THR 7
0.0163
TRP 8
0.0128
LYS 9
0.0098
LEU 10
0.0098
VAL 11
0.0220
SER 12
0.0535
SER 13
0.0406
GLU 14
0.0185
GLU 14
0.0155
ASN 15
0.0218
ASN 15
0.0222
PHE 16
0.0207
ASP 17
0.0381
ASP 18
0.0308
TYR 19
0.0138
MET 20
0.0120
LYS 21
0.0279
GLU 22
0.0325
VAL 23
0.0372
GLY 24
0.0536
VAL 25
0.0253
GLY 26
0.0295
PHE 27
0.0450
ALA 28
0.0294
THR 29
0.0086
ARG 30
0.0154
LYS 31
0.0126
VAL 32
0.0229
VAL 32
0.0234
ALA 33
0.0238
GLY 34
0.0306
MET 35
0.0294
ALA 36
0.0215
LYS 37
0.0070
PRO 38
0.0244
ASN 39
0.0254
MET 40
0.0158
ILE 41
0.0122
ILE 42
0.0134
SER 43
0.0359
VAL 44
0.0521
ASN 45
0.0566
GLY 46
0.0446
ASP 47
0.0441
VAL 48
0.0273
ILE 49
0.0150
THR 50
0.0053
ILE 51
0.0054
LYS 52
0.0145
SER 53
0.0375
GLU 54
0.0405
SER 55
0.0388
SER 55
0.0406
THR 56
0.0229
THR 56
0.0275
PHE 57
0.0058
PHE 57
0.0059
LYS 58
0.0064
LYS 58
0.0047
ASN 59
0.0096
THR 60
0.0521
GLU 61
0.0241
ILE 62
0.0094
SER 63
0.0168
PHE 64
0.0183
ILE 65
0.0281
LEU 66
0.0216
GLY 67
0.0309
GLN 68
0.0285
GLU 69
0.0378
PHE 70
0.0197
ASP 71
0.0086
GLU 72
0.0037
VAL 73
0.0196
VAL 73
0.0208
THR 74
0.0219
ALA 75
0.0215
ASP 76
0.0188
ASP 77
0.0229
ARG 78
0.0136
LYS 79
0.0139
VAL 80
0.0103
LYS 81
0.0233
SER 82
0.0220
THR 83
0.0274
ILE 84
0.0210
THR 85
0.0128
LEU 86
0.0049
LEU 86
0.0055
ASP 87
0.0130
ASP 87
0.0171
GLY 88
0.0170
GLY 88
0.0195
GLY 89
0.0162
GLY 89
0.0146
VAL 90
0.0064
LEU 91
0.0029
VAL 92
0.0119
HIS 93
0.0193
VAL 94
0.0267
GLN 95
0.0165
LYS 96
0.0114
TRP 97
0.0045
ASP 98
0.0145
ASP 98
0.0143
GLY 99
0.0197
LYS 100
0.0120
SER 101
0.0221
THR 102
0.0268
THR 103
0.0313
ILE 104
0.0160
LYS 105
0.0078
ARG 106
0.0059
LYS 107
0.0047
ARG 108
0.0084
GLU 109
0.0158
ASP 110
0.0183
ASP 111
0.0102
LYS 112
0.0040
LEU 113
0.0037
LEU 113
0.0037
VAL 114
0.0156
VAL 115
0.0205
GLU 116
0.0208
GLU 116
0.0201
CYS 117
0.0063
VAL 118
0.0219
MET 119
0.0202
MET 119
0.0192
LYS 120
0.0261
LYS 120
0.0260
GLY 121
0.0099
GLY 121
0.0113
VAL 122
0.0186
THR 123
0.0182
SER 124
0.0099
THR 125
0.0347
ARG 126
0.0275
VAL 127
0.0235
TYR 128
0.0017
GLU 129
0.0130
GLU 129
0.0131
ARG 130
0.0216
ALA 131
0.0346
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.