Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0696
GLN -7
0.0059
GLN -6
0.0123
MET -5
0.0257
GLY -4
0.0348
ARG -3
0.0105
GLY -2
0.0277
SER -1
0.0231
MET 0
0.0320
MET 0
0.0329
CYS 1
0.0185
CYS 1
0.0187
ASP 2
0.0234
ALA 3
0.0210
PHE 4
0.0101
VAL 5
0.0242
GLY 6
0.0204
THR 7
0.0088
TRP 8
0.0346
LYS 9
0.0441
LEU 10
0.0136
VAL 11
0.0227
SER 12
0.0514
SER 13
0.0386
GLU 14
0.0176
GLU 14
0.0143
ASN 15
0.0243
ASN 15
0.0241
PHE 16
0.0232
ASP 17
0.0326
ASP 18
0.0198
TYR 19
0.0123
MET 20
0.0218
LYS 21
0.0129
GLU 22
0.0141
VAL 23
0.0207
GLY 24
0.0569
VAL 25
0.0520
GLY 26
0.0408
PHE 27
0.0559
ALA 28
0.0407
THR 29
0.0106
ARG 30
0.0209
LYS 31
0.0193
VAL 32
0.0085
VAL 32
0.0087
ALA 33
0.0088
GLY 34
0.0084
MET 35
0.0335
ALA 36
0.0407
LYS 37
0.0156
PRO 38
0.0447
ASN 39
0.0445
MET 40
0.0190
ILE 41
0.0341
ILE 42
0.0343
SER 43
0.0441
VAL 44
0.0172
ASN 45
0.0392
GLY 46
0.0409
ASP 47
0.0176
VAL 48
0.0233
ILE 49
0.0152
THR 50
0.0230
ILE 51
0.0323
LYS 52
0.0478
SER 53
0.0360
GLU 54
0.0184
SER 55
0.0106
SER 55
0.0116
THR 56
0.0198
THR 56
0.0224
PHE 57
0.0045
PHE 57
0.0029
LYS 58
0.0099
LYS 58
0.0100
ASN 59
0.0106
THR 60
0.0107
GLU 61
0.0195
ILE 62
0.0301
SER 63
0.0309
PHE 64
0.0228
ILE 65
0.0083
LEU 66
0.0189
GLY 67
0.0301
GLN 68
0.0327
GLU 69
0.0311
PHE 70
0.0205
ASP 71
0.0174
GLU 72
0.0154
VAL 73
0.0125
VAL 73
0.0123
THR 74
0.0078
ALA 75
0.0083
ASP 76
0.0172
ASP 77
0.0212
ARG 78
0.0174
LYS 79
0.0198
VAL 80
0.0139
LYS 81
0.0182
SER 82
0.0184
THR 83
0.0251
ILE 84
0.0245
THR 85
0.0283
LEU 86
0.0188
LEU 86
0.0163
ASP 87
0.0182
ASP 87
0.0147
GLY 88
0.0280
GLY 88
0.0269
GLY 89
0.0226
GLY 89
0.0232
VAL 90
0.0251
LEU 91
0.0145
VAL 92
0.0077
HIS 93
0.0090
VAL 94
0.0059
GLN 95
0.0098
LYS 96
0.0169
TRP 97
0.0180
ASP 98
0.0123
ASP 98
0.0119
GLY 99
0.0276
LYS 100
0.0197
SER 101
0.0162
THR 102
0.0043
THR 103
0.0084
ILE 104
0.0073
LYS 105
0.0106
ARG 106
0.0035
LYS 107
0.0132
ARG 108
0.0302
GLU 109
0.0369
ASP 110
0.0316
ASP 111
0.0255
LYS 112
0.0267
LEU 113
0.0248
LEU 113
0.0248
VAL 114
0.0217
VAL 115
0.0203
GLU 116
0.0170
GLU 116
0.0166
CYS 117
0.0160
VAL 118
0.0202
MET 119
0.0180
MET 119
0.0183
LYS 120
0.0248
LYS 120
0.0237
GLY 121
0.0401
GLY 121
0.0418
VAL 122
0.0137
THR 123
0.0184
SER 124
0.0120
THR 125
0.0257
ARG 126
0.0286
VAL 127
0.0322
TYR 128
0.0162
GLU 129
0.0174
GLU 129
0.0174
ARG 130
0.0209
ALA 131
0.0696
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.