Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0987
GLN -7
0.0091
GLN -6
0.0174
MET -5
0.0155
GLY -4
0.0144
ARG -3
0.0029
GLY -2
0.0399
SER -1
0.0329
MET 0
0.0383
MET 0
0.0386
CYS 1
0.0256
CYS 1
0.0252
ASP 2
0.0259
ALA 3
0.0251
PHE 4
0.0206
VAL 5
0.0179
GLY 6
0.0124
THR 7
0.0187
TRP 8
0.0112
LYS 9
0.0152
LEU 10
0.0028
VAL 11
0.0076
SER 12
0.0133
SER 13
0.0279
GLU 14
0.0534
GLU 14
0.0549
ASN 15
0.0192
ASN 15
0.0195
PHE 16
0.0147
ASP 17
0.0207
ASP 18
0.0211
TYR 19
0.0190
MET 20
0.0194
LYS 21
0.0219
GLU 22
0.0250
VAL 23
0.0136
GLY 24
0.0104
VAL 25
0.0145
GLY 26
0.0403
PHE 27
0.0627
ALA 28
0.0526
THR 29
0.0164
ARG 30
0.0220
LYS 31
0.0407
VAL 32
0.0245
VAL 32
0.0247
ALA 33
0.0300
GLY 34
0.0336
MET 35
0.0292
ALA 36
0.0286
LYS 37
0.0189
PRO 38
0.0121
ASN 39
0.0100
MET 40
0.0131
ILE 41
0.0192
ILE 42
0.0204
SER 43
0.0220
VAL 44
0.0169
ASN 45
0.0362
GLY 46
0.0472
ASP 47
0.0149
VAL 48
0.0090
ILE 49
0.0155
THR 50
0.0201
ILE 51
0.0194
LYS 52
0.0253
SER 53
0.0228
GLU 54
0.0181
SER 55
0.0218
SER 55
0.0217
THR 56
0.0270
THR 56
0.0274
PHE 57
0.0261
PHE 57
0.0261
LYS 58
0.0258
LYS 58
0.0259
ASN 59
0.0259
THR 60
0.0280
GLU 61
0.0256
ILE 62
0.0141
SER 63
0.0123
PHE 64
0.0121
ILE 65
0.0141
LEU 66
0.0167
GLY 67
0.0246
GLN 68
0.0248
GLU 69
0.0252
PHE 70
0.0199
ASP 71
0.0198
GLU 72
0.0172
VAL 73
0.0210
VAL 73
0.0196
THR 74
0.0128
ALA 75
0.0207
ASP 76
0.0187
ASP 77
0.0244
ARG 78
0.0164
LYS 79
0.0248
VAL 80
0.0141
LYS 81
0.0155
SER 82
0.0163
THR 83
0.0199
ILE 84
0.0214
THR 85
0.0189
LEU 86
0.0160
LEU 86
0.0153
ASP 87
0.0135
ASP 87
0.0135
GLY 88
0.0087
GLY 88
0.0083
GLY 89
0.0116
GLY 89
0.0114
VAL 90
0.0090
LEU 91
0.0150
VAL 92
0.0189
HIS 93
0.0204
VAL 94
0.0175
GLN 95
0.0132
LYS 96
0.0101
TRP 97
0.0161
ASP 98
0.0394
ASP 98
0.0391
GLY 99
0.0396
LYS 100
0.0146
SER 101
0.0036
THR 102
0.0086
THR 103
0.0152
ILE 104
0.0197
LYS 105
0.0199
ARG 106
0.0139
LYS 107
0.0122
ARG 108
0.0251
GLU 109
0.0399
ASP 110
0.0987
ASP 111
0.0467
LYS 112
0.0291
LEU 113
0.0102
LEU 113
0.0102
VAL 114
0.0108
VAL 115
0.0173
GLU 116
0.0229
GLU 116
0.0228
CYS 117
0.0223
VAL 118
0.0179
MET 119
0.0158
MET 119
0.0156
LYS 120
0.0245
LYS 120
0.0261
GLY 121
0.0188
GLY 121
0.0186
VAL 122
0.0178
THR 123
0.0221
SER 124
0.0194
THR 125
0.0285
ARG 126
0.0111
VAL 127
0.0123
TYR 128
0.0110
GLU 129
0.0261
GLU 129
0.0254
ARG 130
0.0237
ALA 131
0.0345
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.