CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***

<R2> analysis for 2602031634401408743

---  normal mode 45  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3310
GLN -70.0065
GLN -60.0449
MET -50.0199
GLY -40.0842
ARG -30.0882
GLY -20.3310
SER -10.0595
MET 00.0277
MET 00.0285
CYS 10.0119
CYS 10.0118
ASP 20.0203
ALA 30.0102
PHE 40.0053
VAL 50.0059
GLY 60.0041
THR 70.0125
TRP 80.0097
LYS 90.0157
LEU 100.0172
VAL 110.0223
SER 120.0199
SER 130.0234
GLU 140.0217
GLU 140.0213
ASN 150.0197
ASN 150.0198
PHE 160.0197
ASP 170.0178
ASP 180.0173
TYR 190.0117
MET 200.0079
LYS 210.0105
GLU 220.0109
VAL 230.0059
GLY 240.0070
VAL 250.0065
GLY 260.0048
PHE 270.0087
ALA 280.0130
THR 290.0110
ARG 300.0140
LYS 310.0187
VAL 320.0134
VAL 320.0135
ALA 330.0124
GLY 340.0076
MET 350.0032
ALA 360.0127
LYS 370.0216
PRO 380.0183
ASN 390.0134
MET 400.0078
ILE 410.0029
ILE 420.0089
SER 430.0157
VAL 440.0193
ASN 450.0301
GLY 460.0221
ASP 470.0267
VAL 480.0346
ILE 490.0223
THR 500.0268
ILE 510.0203
LYS 520.0108
SER 530.0091
GLU 540.0095
SER 550.0130
SER 550.0138
THR 560.0113
THR 560.0122
PHE 570.0050
PHE 570.0044
LYS 580.0083
LYS 580.0081
ASN 590.0088
THR 600.0150
GLU 610.0214
ILE 620.0260
SER 630.0290
PHE 640.0248
ILE 650.0263
LEU 660.0181
GLY 670.0298
GLN 680.0153
GLU 690.0058
PHE 700.0147
ASP 710.0319
GLU 720.0161
VAL 730.0218
VAL 730.0201
THR 740.0049
ALA 750.0072
ASP 760.0275
ASP 770.0405
ARG 780.0255
LYS 790.0161
VAL 800.0124
LYS 810.0200
SER 820.0091
THR 830.0156
ILE 840.0174
THR 850.0191
LEU 860.0199
LEU 860.0203
ASP 870.0322
ASP 870.0330
GLY 880.0473
GLY 880.0488
GLY 890.0302
GLY 890.0304
VAL 900.0194
LEU 910.0093
VAL 920.0102
HIS 930.0141
VAL 940.0144
GLN 950.0130
LYS 960.0175
TRP 970.0178
ASP 980.0519
ASP 980.0519
GLY 990.0529
LYS 1000.0158
SER 1010.0072
THR 1020.0131
THR 1030.0094
ILE 1040.0113
LYS 1050.0082
ARG 1060.0086
LYS 1070.0128
ARG 1080.0181
GLU 1090.0192
ASP 1100.0224
ASP 1110.0270
LYS 1120.0162
LEU 1130.0127
LEU 1130.0127
VAL 1140.0136
VAL 1150.0144
GLU 1160.0123
GLU 1160.0124
CYS 1170.0128
VAL 1180.0088
MET 1190.0056
MET 1190.0050
LYS 1200.0075
LYS 1200.0093
GLY 1210.0142
GLY 1210.0136
VAL 1220.0128
THR 1230.0108
SER 1240.0144
THR 1250.0139
ARG 1260.0201
VAL 1270.0187
TYR 1280.0147
GLU 1290.0202
GLU 1290.0197
ARG 1300.0198
ALA 1310.0275

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.