Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.1237
GLN -7
0.0107
GLN -6
0.0075
MET -5
0.0093
GLY -4
0.0302
ARG -3
0.0223
GLY -2
0.1237
SER -1
0.0477
MET 0
0.0358
MET 0
0.0362
CYS 1
0.0073
CYS 1
0.0074
ASP 2
0.0229
ALA 3
0.0190
PHE 4
0.0158
VAL 5
0.0261
GLY 6
0.0248
THR 7
0.0165
TRP 8
0.0090
LYS 9
0.0238
LEU 10
0.0351
VAL 11
0.0415
SER 12
0.0395
SER 13
0.0226
GLU 14
0.0126
GLU 14
0.0139
ASN 15
0.0168
ASN 15
0.0168
PHE 16
0.0100
ASP 17
0.0175
ASP 18
0.0140
TYR 19
0.0138
MET 20
0.0162
LYS 21
0.0133
GLU 22
0.0097
VAL 23
0.0203
GLY 24
0.0263
VAL 25
0.0229
GLY 26
0.0140
PHE 27
0.0024
ALA 28
0.0265
THR 29
0.0226
ARG 30
0.0242
LYS 31
0.0366
VAL 32
0.0284
VAL 32
0.0288
ALA 33
0.0222
GLY 34
0.0203
MET 35
0.0105
ALA 36
0.0078
LYS 37
0.0234
PRO 38
0.0209
ASN 39
0.0134
MET 40
0.0190
ILE 41
0.0222
ILE 42
0.0194
SER 43
0.0158
VAL 44
0.0227
ASN 45
0.0263
GLY 46
0.0699
ASP 47
0.0473
VAL 48
0.0314
ILE 49
0.0262
THR 50
0.0152
ILE 51
0.0124
LYS 52
0.0178
SER 53
0.0263
GLU 54
0.0213
SER 55
0.0222
SER 55
0.0228
THR 56
0.0258
THR 56
0.0292
PHE 57
0.0103
PHE 57
0.0143
LYS 58
0.0271
LYS 58
0.0295
ASN 59
0.0403
THR 60
0.0584
GLU 61
0.0230
ILE 62
0.0130
SER 63
0.0247
PHE 64
0.0265
ILE 65
0.0312
LEU 66
0.0283
GLY 67
0.0217
GLN 68
0.0143
GLU 69
0.0206
PHE 70
0.0268
ASP 71
0.0423
GLU 72
0.0235
VAL 73
0.0121
VAL 73
0.0104
THR 74
0.0088
ALA 75
0.0109
ASP 76
0.0117
ASP 77
0.0202
ARG 78
0.0100
LYS 79
0.0154
VAL 80
0.0158
LYS 81
0.0220
SER 82
0.0214
THR 83
0.0144
ILE 84
0.0147
THR 85
0.0144
LEU 86
0.0184
LEU 86
0.0162
ASP 87
0.0301
ASP 87
0.0294
GLY 88
0.0342
GLY 88
0.0342
GLY 89
0.0212
GLY 89
0.0221
VAL 90
0.0084
LEU 91
0.0084
VAL 92
0.0066
HIS 93
0.0076
VAL 94
0.0109
GLN 95
0.0098
LYS 96
0.0127
TRP 97
0.0139
ASP 98
0.0202
ASP 98
0.0202
GLY 99
0.0350
LYS 100
0.0217
SER 101
0.0165
THR 102
0.0078
THR 103
0.0130
ILE 104
0.0163
LYS 105
0.0159
ARG 106
0.0099
LYS 107
0.0161
ARG 108
0.0262
GLU 109
0.0547
ASP 110
0.0454
ASP 111
0.0244
LYS 112
0.0125
LEU 113
0.0128
LEU 113
0.0128
VAL 114
0.0228
VAL 115
0.0181
GLU 116
0.0185
GLU 116
0.0186
CYS 117
0.0188
VAL 118
0.0191
MET 119
0.0156
MET 119
0.0153
LYS 120
0.0291
LYS 120
0.0239
GLY 121
0.0482
GLY 121
0.0494
VAL 122
0.0172
THR 123
0.0209
SER 124
0.0125
THR 125
0.0096
ARG 126
0.0265
VAL 127
0.0231
TYR 128
0.0227
GLU 129
0.0195
GLU 129
0.0184
ARG 130
0.0113
ALA 131
0.0132
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.