Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0948
GLN -7
0.0649
GLN -6
0.0318
MET -5
0.0654
GLY -4
0.0948
ARG -3
0.0797
GLY -2
0.0488
SER -1
0.0081
MET 0
0.0079
MET 0
0.0080
CYS 1
0.0071
CYS 1
0.0072
ASP 2
0.0115
ALA 3
0.0126
PHE 4
0.0024
VAL 5
0.0072
GLY 6
0.0204
THR 7
0.0266
TRP 8
0.0159
LYS 9
0.0115
LEU 10
0.0119
VAL 11
0.0095
SER 12
0.0192
SER 13
0.0382
GLU 14
0.0319
GLU 14
0.0339
ASN 15
0.0213
ASN 15
0.0212
PHE 16
0.0171
ASP 17
0.0039
ASP 18
0.0076
TYR 19
0.0144
MET 20
0.0121
LYS 21
0.0155
GLU 22
0.0224
VAL 23
0.0144
GLY 24
0.0047
VAL 25
0.0037
GLY 26
0.0118
PHE 27
0.0117
ALA 28
0.0070
THR 29
0.0103
ARG 30
0.0060
LYS 31
0.0118
VAL 32
0.0138
VAL 32
0.0139
ALA 33
0.0100
GLY 34
0.0092
MET 35
0.0172
ALA 36
0.0230
LYS 37
0.0214
PRO 38
0.0235
ASN 39
0.0296
MET 40
0.0325
ILE 41
0.0392
ILE 42
0.0253
SER 43
0.0217
VAL 44
0.0151
ASN 45
0.0176
GLY 46
0.0296
ASP 47
0.0221
VAL 48
0.0125
ILE 49
0.0108
THR 50
0.0162
ILE 51
0.0235
LYS 52
0.0295
SER 53
0.0495
GLU 54
0.0389
SER 55
0.0305
SER 55
0.0327
THR 56
0.0308
THR 56
0.0346
PHE 57
0.0189
PHE 57
0.0201
LYS 58
0.0158
LYS 58
0.0167
ASN 59
0.0146
THR 60
0.0272
GLU 61
0.0224
ILE 62
0.0061
SER 63
0.0047
PHE 64
0.0115
ILE 65
0.0101
LEU 66
0.0066
GLY 67
0.0241
GLN 68
0.0169
GLU 69
0.0354
PHE 70
0.0314
ASP 71
0.0512
GLU 72
0.0161
VAL 73
0.0123
VAL 73
0.0158
THR 74
0.0139
ALA 75
0.0146
ASP 76
0.0261
ASP 77
0.0162
ARG 78
0.0119
LYS 79
0.0120
VAL 80
0.0179
LYS 81
0.0247
SER 82
0.0159
THR 83
0.0206
ILE 84
0.0157
THR 85
0.0139
LEU 86
0.0135
LEU 86
0.0136
ASP 87
0.0152
ASP 87
0.0153
GLY 88
0.0173
GLY 88
0.0172
GLY 89
0.0100
GLY 89
0.0107
VAL 90
0.0071
LEU 91
0.0106
VAL 92
0.0155
HIS 93
0.0150
VAL 94
0.0122
GLN 95
0.0074
LYS 96
0.0082
TRP 97
0.0133
ASP 98
0.0270
ASP 98
0.0261
GLY 99
0.0405
LYS 100
0.0137
SER 101
0.0066
THR 102
0.0052
THR 103
0.0089
ILE 104
0.0139
LYS 105
0.0101
ARG 106
0.0054
LYS 107
0.0077
ARG 108
0.0138
GLU 109
0.0261
ASP 110
0.0136
ASP 111
0.0093
LYS 112
0.0061
LEU 113
0.0028
LEU 113
0.0029
VAL 114
0.0042
VAL 115
0.0107
GLU 116
0.0179
GLU 116
0.0179
CYS 117
0.0193
VAL 118
0.0131
MET 119
0.0139
MET 119
0.0131
LYS 120
0.0198
LYS 120
0.0212
GLY 121
0.0379
GLY 121
0.0377
VAL 122
0.0137
THR 123
0.0145
SER 124
0.0242
THR 125
0.0368
ARG 126
0.0278
VAL 127
0.0077
TYR 128
0.0047
GLU 129
0.0050
GLU 129
0.0051
ARG 130
0.0172
ALA 131
0.0352
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.