Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.1455
GLN -7
0.1106
GLN -6
0.1455
MET -5
0.0954
GLY -4
0.1128
ARG -3
0.0564
GLY -2
0.1072
SER -1
0.0542
MET 0
0.0374
MET 0
0.0376
CYS 1
0.0189
CYS 1
0.0187
ASP 2
0.0216
ALA 3
0.0112
PHE 4
0.0033
VAL 5
0.0057
GLY 6
0.0127
THR 7
0.0188
TRP 8
0.0180
LYS 9
0.0192
LEU 10
0.0134
VAL 11
0.0153
SER 12
0.0095
SER 13
0.0062
GLU 14
0.0155
GLU 14
0.0159
ASN 15
0.0213
ASN 15
0.0213
PHE 16
0.0135
ASP 17
0.0226
ASP 18
0.0233
TYR 19
0.0129
MET 20
0.0118
LYS 21
0.0182
GLU 22
0.0128
VAL 23
0.0030
GLY 24
0.0106
VAL 25
0.0173
GLY 26
0.0327
PHE 27
0.0415
ALA 28
0.0421
THR 29
0.0259
ARG 30
0.0230
LYS 31
0.0296
VAL 32
0.0196
VAL 32
0.0196
ALA 33
0.0114
GLY 34
0.0142
MET 35
0.0104
ALA 36
0.0010
LYS 37
0.0076
PRO 38
0.0120
ASN 39
0.0172
MET 40
0.0156
ILE 41
0.0150
ILE 42
0.0104
SER 43
0.0123
VAL 44
0.0294
ASN 45
0.0619
GLY 46
0.0777
ASP 47
0.0532
VAL 48
0.0321
ILE 49
0.0146
THR 50
0.0146
ILE 51
0.0119
LYS 52
0.0131
SER 53
0.0142
GLU 54
0.0149
SER 55
0.0094
SER 55
0.0093
THR 56
0.0084
THR 56
0.0094
PHE 57
0.0104
PHE 57
0.0110
LYS 58
0.0122
LYS 58
0.0122
ASN 59
0.0124
THR 60
0.0124
GLU 61
0.0117
ILE 62
0.0140
SER 63
0.0168
PHE 64
0.0119
ILE 65
0.0136
LEU 66
0.0116
GLY 67
0.0117
GLN 68
0.0049
GLU 69
0.0145
PHE 70
0.0149
ASP 71
0.0188
GLU 72
0.0158
VAL 73
0.0137
VAL 73
0.0136
THR 74
0.0102
ALA 75
0.0088
ASP 76
0.0113
ASP 77
0.0118
ARG 78
0.0111
LYS 79
0.0163
VAL 80
0.0165
LYS 81
0.0203
SER 82
0.0159
THR 83
0.0121
ILE 84
0.0056
THR 85
0.0060
LEU 86
0.0094
LEU 86
0.0100
ASP 87
0.0156
ASP 87
0.0165
GLY 88
0.0254
GLY 88
0.0260
GLY 89
0.0222
GLY 89
0.0216
VAL 90
0.0114
LEU 91
0.0044
VAL 92
0.0093
HIS 93
0.0121
VAL 94
0.0155
GLN 95
0.0161
LYS 96
0.0203
TRP 97
0.0200
ASP 98
0.0250
ASP 98
0.0247
GLY 99
0.0271
LYS 100
0.0182
SER 101
0.0178
THR 102
0.0135
THR 103
0.0146
ILE 104
0.0123
LYS 105
0.0112
ARG 106
0.0095
LYS 107
0.0087
ARG 108
0.0110
GLU 109
0.0182
ASP 110
0.0233
ASP 111
0.0218
LYS 112
0.0186
LEU 113
0.0133
LEU 113
0.0133
VAL 114
0.0128
VAL 115
0.0109
GLU 116
0.0099
GLU 116
0.0098
CYS 117
0.0085
VAL 118
0.0132
MET 119
0.0131
MET 119
0.0149
LYS 120
0.0232
LYS 120
0.0233
GLY 121
0.0307
GLY 121
0.0307
VAL 122
0.0224
THR 123
0.0169
SER 124
0.0115
THR 125
0.0116
ARG 126
0.0068
VAL 127
0.0133
TYR 128
0.0162
GLU 129
0.0216
GLU 129
0.0214
ARG 130
0.0227
ALA 131
0.0266
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.