Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.1706
GLN -7
0.0220
GLN -6
0.0556
MET -5
0.0115
GLY -4
0.0746
ARG -3
0.0713
GLY -2
0.1706
SER -1
0.0654
MET 0
0.0328
MET 0
0.0331
CYS 1
0.0095
CYS 1
0.0090
ASP 2
0.0267
ALA 3
0.0132
PHE 4
0.0105
VAL 5
0.0109
GLY 6
0.0092
THR 7
0.0061
TRP 8
0.0054
LYS 9
0.0148
LEU 10
0.0206
VAL 11
0.0251
SER 12
0.0239
SER 13
0.0282
GLU 14
0.0357
GLU 14
0.0360
ASN 15
0.0319
ASN 15
0.0318
PHE 16
0.0231
ASP 17
0.0148
ASP 18
0.0193
TYR 19
0.0248
MET 20
0.0138
LYS 21
0.0082
GLU 22
0.0180
VAL 23
0.0162
GLY 24
0.0079
VAL 25
0.0076
GLY 26
0.0156
PHE 27
0.0273
ALA 28
0.0345
THR 29
0.0252
ARG 30
0.0251
LYS 31
0.0343
VAL 32
0.0316
VAL 32
0.0317
ALA 33
0.0317
GLY 34
0.0278
MET 35
0.0291
ALA 36
0.0291
LYS 37
0.0217
PRO 38
0.0215
ASN 39
0.0088
MET 40
0.0070
ILE 41
0.0126
ILE 42
0.0108
SER 43
0.0123
VAL 44
0.0107
ASN 45
0.0067
GLY 46
0.0076
ASP 47
0.0111
VAL 48
0.0087
ILE 49
0.0105
THR 50
0.0125
ILE 51
0.0115
LYS 52
0.0199
SER 53
0.0214
GLU 54
0.0238
SER 55
0.0284
SER 55
0.0281
THR 56
0.0305
THR 56
0.0306
PHE 57
0.0295
PHE 57
0.0296
LYS 58
0.0286
LYS 58
0.0292
ASN 59
0.0290
THR 60
0.0245
GLU 61
0.0206
ILE 62
0.0124
SER 63
0.0134
PHE 64
0.0184
ILE 65
0.0185
LEU 66
0.0214
GLY 67
0.0262
GLN 68
0.0294
GLU 69
0.0317
PHE 70
0.0312
ASP 71
0.0278
GLU 72
0.0223
VAL 73
0.0171
VAL 73
0.0165
THR 74
0.0076
ALA 75
0.0136
ASP 76
0.0168
ASP 77
0.0171
ARG 78
0.0172
LYS 79
0.0228
VAL 80
0.0163
LYS 81
0.0223
SER 82
0.0237
THR 83
0.0254
ILE 84
0.0233
THR 85
0.0216
LEU 86
0.0204
LEU 86
0.0210
ASP 87
0.0205
ASP 87
0.0208
GLY 88
0.0145
GLY 88
0.0151
GLY 89
0.0092
GLY 89
0.0092
VAL 90
0.0159
LEU 91
0.0173
VAL 92
0.0181
HIS 93
0.0197
VAL 94
0.0147
GLN 95
0.0123
LYS 96
0.0071
TRP 97
0.0085
ASP 98
0.0295
ASP 98
0.0295
GLY 99
0.0334
LYS 100
0.0185
SER 101
0.0093
THR 102
0.0110
THR 103
0.0100
ILE 104
0.0155
LYS 105
0.0136
ARG 106
0.0140
LYS 107
0.0160
ARG 108
0.0203
GLU 109
0.0337
ASP 110
0.0470
ASP 111
0.0361
LYS 112
0.0160
LEU 113
0.0080
LEU 113
0.0080
VAL 114
0.0131
VAL 115
0.0189
GLU 116
0.0217
GLU 116
0.0217
CYS 117
0.0264
VAL 118
0.0249
MET 119
0.0233
MET 119
0.0236
LYS 120
0.0271
LYS 120
0.0271
GLY 121
0.0345
GLY 121
0.0348
VAL 122
0.0308
THR 123
0.0310
SER 124
0.0289
THR 125
0.0250
ARG 126
0.0195
VAL 127
0.0119
TYR 128
0.0094
GLU 129
0.0167
GLU 129
0.0162
ARG 130
0.0163
ALA 131
0.0201
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.