CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***

<R2> analysis for 2602031635391411225

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0914
GLN -70.0135
GLN -60.0246
MET -50.0130
GLY -40.0096
ARG -30.0112
GLY -20.0866
SER -10.0056
MET 00.0105
MET 00.0108
CYS 10.0045
CYS 10.0045
ASP 20.0101
ALA 30.0058
PHE 40.0060
VAL 50.0152
GLY 60.0127
THR 70.0086
TRP 80.0062
LYS 90.0104
LEU 100.0104
VAL 110.0102
SER 120.0139
SER 130.0204
GLU 140.0283
GLU 140.0281
ASN 150.0220
ASN 150.0220
PHE 160.0110
ASP 170.0279
ASP 180.0286
TYR 190.0134
MET 200.0242
LYS 210.0474
GLU 220.0238
VAL 230.0202
GLY 240.0333
VAL 250.0355
GLY 260.0638
PHE 270.0362
ALA 280.0534
THR 290.0296
ARG 300.0066
LYS 310.0369
VAL 320.0393
VAL 320.0396
ALA 330.0245
GLY 340.0345
MET 350.0415
ALA 360.0191
LYS 370.0150
PRO 380.0200
ASN 390.0157
MET 400.0101
ILE 410.0098
ILE 420.0116
SER 430.0203
VAL 440.0316
ASN 450.0261
GLY 460.0780
ASP 470.0755
VAL 480.0523
ILE 490.0253
THR 500.0110
ILE 510.0027
LYS 520.0130
SER 530.0202
GLU 540.0224
SER 550.0180
SER 550.0197
THR 560.0216
THR 560.0226
PHE 570.0178
PHE 570.0185
LYS 580.0090
LYS 580.0081
ASN 590.0164
THR 600.0231
GLU 610.0144
ILE 620.0094
SER 630.0196
PHE 640.0259
ILE 650.0265
LEU 660.0040
GLY 670.0218
GLN 680.0397
GLU 690.0146
PHE 700.0168
ASP 710.0072
GLU 720.0046
VAL 730.0151
VAL 730.0151
THR 740.0217
ALA 750.0253
ASP 760.0272
ASP 770.0283
ARG 780.0175
LYS 790.0134
VAL 800.0036
LYS 810.0071
SER 820.0124
THR 830.0086
ILE 840.0090
THR 850.0093
LEU 860.0064
LEU 860.0060
ASP 870.0068
ASP 870.0057
GLY 880.0064
GLY 880.0056
GLY 890.0076
GLY 890.0076
VAL 900.0031
LEU 910.0046
VAL 920.0088
HIS 930.0106
VAL 940.0129
GLN 950.0122
LYS 960.0099
TRP 970.0035
ASP 980.0217
ASP 980.0223
GLY 990.0296
LYS 1000.0190
SER 1010.0195
THR 1020.0130
THR 1030.0098
ILE 1040.0051
LYS 1050.0019
ARG 1060.0044
LYS 1070.0108
ARG 1080.0121
GLU 1090.0156
ASP 1100.0124
ASP 1110.0113
LYS 1120.0064
LEU 1130.0080
LEU 1130.0080
VAL 1140.0090
VAL 1150.0064
GLU 1160.0067
GLU 1160.0067
CYS 1170.0084
VAL 1180.0146
MET 1190.0187
MET 1190.0231
LYS 1200.0720
LYS 1200.0700
GLY 1210.0889
GLY 1210.0914
VAL 1220.0356
THR 1230.0220
SER 1240.0136
THR 1250.0058
ARG 1260.0030
VAL 1270.0073
TYR 1280.0073
GLU 1290.0058
GLU 1290.0058
ARG 1300.0101
ALA 1310.0191

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.