CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***

<R2> analysis for 2602031635391411225

---  normal mode 91  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0984
GLN -70.0215
GLN -60.0140
MET -50.0506
GLY -40.0984
ARG -30.0178
GLY -20.0481
SER -10.0943
MET 00.0455
MET 00.0473
CYS 10.0091
CYS 10.0090
ASP 20.0191
ALA 30.0194
PHE 40.0144
VAL 50.0150
GLY 60.0263
THR 70.0250
TRP 80.0245
LYS 90.0212
LEU 100.0286
VAL 110.0502
SER 120.0638
SER 130.0237
GLU 140.0225
GLU 140.0222
ASN 150.0175
ASN 150.0174
PHE 160.0031
ASP 170.0230
ASP 180.0154
TYR 190.0100
MET 200.0132
LYS 210.0136
GLU 220.0133
VAL 230.0128
GLY 240.0055
VAL 250.0330
GLY 260.0722
PHE 270.0374
ALA 280.0230
THR 290.0192
ARG 300.0314
LYS 310.0328
VAL 320.0196
VAL 320.0204
ALA 330.0136
GLY 340.0148
MET 350.0226
ALA 360.0180
LYS 370.0138
PRO 380.0238
ASN 390.0135
MET 400.0170
ILE 410.0042
ILE 420.0063
SER 430.0243
VAL 440.0376
ASN 450.0610
GLY 460.0398
ASP 470.0330
VAL 480.0310
ILE 490.0235
THR 500.0215
ILE 510.0091
LYS 520.0184
SER 530.0246
GLU 540.0324
SER 550.0276
SER 550.0295
THR 560.0275
THR 560.0274
PHE 570.0179
PHE 570.0195
LYS 580.0174
LYS 580.0183
ASN 590.0174
THR 600.0268
GLU 610.0120
ILE 620.0104
SER 630.0147
PHE 640.0112
ILE 650.0228
LEU 660.0267
GLY 670.0260
GLN 680.0303
GLU 690.0356
PHE 700.0138
ASP 710.0104
GLU 720.0087
VAL 730.0081
VAL 730.0070
THR 740.0041
ALA 750.0162
ASP 760.0263
ASP 770.0076
ARG 780.0070
LYS 790.0136
VAL 800.0087
LYS 810.0158
SER 820.0153
THR 830.0163
ILE 840.0184
THR 850.0215
LEU 860.0187
LEU 860.0207
ASP 870.0202
ASP 870.0216
GLY 880.0410
GLY 880.0409
GLY 890.0179
GLY 890.0192
VAL 900.0122
LEU 910.0114
VAL 920.0116
HIS 930.0078
VAL 940.0148
GLN 950.0148
LYS 960.0247
TRP 970.0258
ASP 980.0597
ASP 980.0564
GLY 990.0733
LYS 1000.0117
SER 1010.0231
THR 1020.0106
THR 1030.0118
ILE 1040.0088
LYS 1050.0083
ARG 1060.0100
LYS 1070.0106
ARG 1080.0175
GLU 1090.0228
ASP 1100.0158
ASP 1110.0183
LYS 1120.0172
LEU 1130.0201
LEU 1130.0202
VAL 1140.0230
VAL 1150.0123
GLU 1160.0195
GLU 1160.0191
CYS 1170.0108
VAL 1180.0118
MET 1190.0086
MET 1190.0077
LYS 1200.0046
LYS 1200.0069
GLY 1210.0162
GLY 1210.0163
VAL 1220.0159
THR 1230.0095
SER 1240.0101
THR 1250.0175
ARG 1260.0108
VAL 1270.0207
TYR 1280.0149
GLU 1290.0025
GLU 1290.0030
ARG 1300.0244
ALA 1310.0334

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.