Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0984
GLN -7
0.0215
GLN -6
0.0140
MET -5
0.0506
GLY -4
0.0984
ARG -3
0.0178
GLY -2
0.0481
SER -1
0.0943
MET 0
0.0455
MET 0
0.0473
CYS 1
0.0091
CYS 1
0.0090
ASP 2
0.0191
ALA 3
0.0194
PHE 4
0.0144
VAL 5
0.0150
GLY 6
0.0263
THR 7
0.0250
TRP 8
0.0245
LYS 9
0.0212
LEU 10
0.0286
VAL 11
0.0502
SER 12
0.0638
SER 13
0.0237
GLU 14
0.0225
GLU 14
0.0222
ASN 15
0.0175
ASN 15
0.0174
PHE 16
0.0031
ASP 17
0.0230
ASP 18
0.0154
TYR 19
0.0100
MET 20
0.0132
LYS 21
0.0136
GLU 22
0.0133
VAL 23
0.0128
GLY 24
0.0055
VAL 25
0.0330
GLY 26
0.0722
PHE 27
0.0374
ALA 28
0.0230
THR 29
0.0192
ARG 30
0.0314
LYS 31
0.0328
VAL 32
0.0196
VAL 32
0.0204
ALA 33
0.0136
GLY 34
0.0148
MET 35
0.0226
ALA 36
0.0180
LYS 37
0.0138
PRO 38
0.0238
ASN 39
0.0135
MET 40
0.0170
ILE 41
0.0042
ILE 42
0.0063
SER 43
0.0243
VAL 44
0.0376
ASN 45
0.0610
GLY 46
0.0398
ASP 47
0.0330
VAL 48
0.0310
ILE 49
0.0235
THR 50
0.0215
ILE 51
0.0091
LYS 52
0.0184
SER 53
0.0246
GLU 54
0.0324
SER 55
0.0276
SER 55
0.0295
THR 56
0.0275
THR 56
0.0274
PHE 57
0.0179
PHE 57
0.0195
LYS 58
0.0174
LYS 58
0.0183
ASN 59
0.0174
THR 60
0.0268
GLU 61
0.0120
ILE 62
0.0104
SER 63
0.0147
PHE 64
0.0112
ILE 65
0.0228
LEU 66
0.0267
GLY 67
0.0260
GLN 68
0.0303
GLU 69
0.0356
PHE 70
0.0138
ASP 71
0.0104
GLU 72
0.0087
VAL 73
0.0081
VAL 73
0.0070
THR 74
0.0041
ALA 75
0.0162
ASP 76
0.0263
ASP 77
0.0076
ARG 78
0.0070
LYS 79
0.0136
VAL 80
0.0087
LYS 81
0.0158
SER 82
0.0153
THR 83
0.0163
ILE 84
0.0184
THR 85
0.0215
LEU 86
0.0187
LEU 86
0.0207
ASP 87
0.0202
ASP 87
0.0216
GLY 88
0.0410
GLY 88
0.0409
GLY 89
0.0179
GLY 89
0.0192
VAL 90
0.0122
LEU 91
0.0114
VAL 92
0.0116
HIS 93
0.0078
VAL 94
0.0148
GLN 95
0.0148
LYS 96
0.0247
TRP 97
0.0258
ASP 98
0.0597
ASP 98
0.0564
GLY 99
0.0733
LYS 100
0.0117
SER 101
0.0231
THR 102
0.0106
THR 103
0.0118
ILE 104
0.0088
LYS 105
0.0083
ARG 106
0.0100
LYS 107
0.0106
ARG 108
0.0175
GLU 109
0.0228
ASP 110
0.0158
ASP 111
0.0183
LYS 112
0.0172
LEU 113
0.0201
LEU 113
0.0202
VAL 114
0.0230
VAL 115
0.0123
GLU 116
0.0195
GLU 116
0.0191
CYS 117
0.0108
VAL 118
0.0118
MET 119
0.0086
MET 119
0.0077
LYS 120
0.0046
LYS 120
0.0069
GLY 121
0.0162
GLY 121
0.0163
VAL 122
0.0159
THR 123
0.0095
SER 124
0.0101
THR 125
0.0175
ARG 126
0.0108
VAL 127
0.0207
TYR 128
0.0149
GLU 129
0.0025
GLU 129
0.0030
ARG 130
0.0244
ALA 131
0.0334
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.