Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0661
GLN -7
0.0017
GLN -6
0.0089
MET -5
0.0041
GLY -4
0.0200
ARG -3
0.0392
GLY -2
0.0316
SER -1
0.0312
MET 0
0.0325
MET 0
0.0326
CYS 1
0.0252
CYS 1
0.0250
ASP 2
0.0290
ALA 3
0.0256
PHE 4
0.0206
VAL 5
0.0233
GLY 6
0.0223
THR 7
0.0229
TRP 8
0.0231
LYS 9
0.0235
LEU 10
0.0290
VAL 11
0.0252
SER 12
0.0376
SER 13
0.0590
GLU 14
0.0661
GLU 14
0.0652
ASN 15
0.0468
ASN 15
0.0472
PHE 16
0.0501
ASP 17
0.0380
ASP 18
0.0266
TYR 19
0.0276
MET 20
0.0327
LYS 21
0.0253
GLU 22
0.0227
VAL 23
0.0313
GLY 24
0.0340
VAL 25
0.0326
GLY 26
0.0237
PHE 27
0.0152
ALA 28
0.0127
THR 29
0.0120
ARG 30
0.0178
LYS 31
0.0121
VAL 32
0.0110
VAL 32
0.0115
ALA 33
0.0129
GLY 34
0.0325
MET 35
0.0397
ALA 36
0.0207
LYS 37
0.0228
PRO 38
0.0188
ASN 39
0.0190
MET 40
0.0183
ILE 41
0.0149
ILE 42
0.0180
SER 43
0.0200
VAL 44
0.0297
ASN 45
0.0426
GLY 46
0.0349
ASP 47
0.0364
VAL 48
0.0314
ILE 49
0.0261
THR 50
0.0213
ILE 51
0.0206
LYS 52
0.0111
SER 53
0.0073
GLU 54
0.0087
SER 55
0.0079
SER 55
0.0081
THR 56
0.0074
THR 56
0.0068
PHE 57
0.0034
PHE 57
0.0039
LYS 58
0.0044
LYS 58
0.0047
ASN 59
0.0110
THR 60
0.0242
GLU 61
0.0215
ILE 62
0.0300
SER 63
0.0263
PHE 64
0.0279
ILE 65
0.0279
LEU 66
0.0165
GLY 67
0.0227
GLN 68
0.0355
GLU 69
0.0308
PHE 70
0.0349
ASP 71
0.0340
GLU 72
0.0339
VAL 73
0.0316
VAL 73
0.0314
THR 74
0.0312
ALA 75
0.0195
ASP 76
0.0230
ASP 77
0.0307
ARG 78
0.0297
LYS 79
0.0310
VAL 80
0.0247
LYS 81
0.0230
SER 82
0.0190
THR 83
0.0118
ILE 84
0.0087
THR 85
0.0079
LEU 86
0.0134
LEU 86
0.0130
ASP 87
0.0160
ASP 87
0.0167
GLY 88
0.0160
GLY 88
0.0164
GLY 89
0.0160
GLY 89
0.0157
VAL 90
0.0159
LEU 91
0.0142
VAL 92
0.0135
HIS 93
0.0155
VAL 94
0.0185
GLN 95
0.0223
LYS 96
0.0291
TRP 97
0.0345
ASP 98
0.0548
ASP 98
0.0541
GLY 99
0.0499
LYS 100
0.0333
SER 101
0.0303
THR 102
0.0295
THR 103
0.0249
ILE 104
0.0229
LYS 105
0.0177
ARG 106
0.0181
LYS 107
0.0215
ARG 108
0.0275
GLU 109
0.0448
ASP 110
0.0582
ASP 111
0.0400
LYS 112
0.0244
LEU 113
0.0212
LEU 113
0.0212
VAL 114
0.0183
VAL 115
0.0212
GLU 116
0.0136
GLU 116
0.0138
CYS 117
0.0232
VAL 118
0.0192
MET 119
0.0239
MET 119
0.0237
LYS 120
0.0213
LYS 120
0.0210
GLY 121
0.0154
GLY 121
0.0154
VAL 122
0.0124
THR 123
0.0154
SER 124
0.0284
THR 125
0.0233
ARG 126
0.0346
VAL 127
0.0222
TYR 128
0.0227
GLU 129
0.0214
GLU 129
0.0216
ARG 130
0.0232
ALA 131
0.0241
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.