Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0682
GLN -7
0.0027
GLN -6
0.0133
MET -5
0.0094
GLY -4
0.0171
ARG -3
0.0163
GLY -2
0.0511
SER -1
0.0082
MET 0
0.0049
MET 0
0.0049
CYS 1
0.0067
CYS 1
0.0068
ASP 2
0.0075
ALA 3
0.0096
PHE 4
0.0111
VAL 5
0.0179
GLY 6
0.0251
THR 7
0.0276
TRP 8
0.0205
LYS 9
0.0173
LEU 10
0.0142
VAL 11
0.0133
SER 12
0.0216
SER 13
0.0259
GLU 14
0.0588
GLU 14
0.0609
ASN 15
0.0396
ASN 15
0.0399
PHE 16
0.0193
ASP 17
0.0261
ASP 18
0.0323
TYR 19
0.0116
MET 20
0.0137
LYS 21
0.0321
GLU 22
0.0260
VAL 23
0.0215
GLY 24
0.0313
VAL 25
0.0262
GLY 26
0.0403
PHE 27
0.0351
ALA 28
0.0497
THR 29
0.0339
ARG 30
0.0144
LYS 31
0.0339
VAL 32
0.0466
VAL 32
0.0468
ALA 33
0.0260
GLY 34
0.0254
MET 35
0.0425
ALA 36
0.0258
LYS 37
0.0179
PRO 38
0.0226
ASN 39
0.0255
MET 40
0.0313
ILE 41
0.0337
ILE 42
0.0284
SER 43
0.0202
VAL 44
0.0081
ASN 45
0.0255
GLY 46
0.0312
ASP 47
0.0227
VAL 48
0.0201
ILE 49
0.0160
THR 50
0.0210
ILE 51
0.0288
LYS 52
0.0314
SER 53
0.0308
GLU 54
0.0235
SER 55
0.0183
SER 55
0.0211
THR 56
0.0304
THR 56
0.0316
PHE 57
0.0267
PHE 57
0.0277
LYS 58
0.0143
LYS 58
0.0144
ASN 59
0.0057
THR 60
0.0158
GLU 61
0.0244
ILE 62
0.0326
SER 63
0.0284
PHE 64
0.0299
ILE 65
0.0269
LEU 66
0.0230
GLY 67
0.0271
GLN 68
0.0311
GLU 69
0.0259
PHE 70
0.0340
ASP 71
0.0411
GLU 72
0.0307
VAL 73
0.0197
VAL 73
0.0213
THR 74
0.0195
ALA 75
0.0102
ASP 76
0.0170
ASP 77
0.0087
ARG 78
0.0064
LYS 79
0.0134
VAL 80
0.0127
LYS 81
0.0222
SER 82
0.0204
THR 83
0.0196
ILE 84
0.0220
THR 85
0.0193
LEU 86
0.0134
LEU 86
0.0143
ASP 87
0.0175
ASP 87
0.0189
GLY 88
0.0158
GLY 88
0.0171
GLY 89
0.0078
GLY 89
0.0076
VAL 90
0.0060
LEU 91
0.0057
VAL 92
0.0131
HIS 93
0.0141
VAL 94
0.0151
GLN 95
0.0140
LYS 96
0.0033
TRP 97
0.0128
ASP 98
0.0682
ASP 98
0.0675
GLY 99
0.0342
LYS 100
0.0177
SER 101
0.0213
THR 102
0.0221
THR 103
0.0200
ILE 104
0.0107
LYS 105
0.0103
ARG 106
0.0093
LYS 107
0.0124
ARG 108
0.0154
GLU 109
0.0273
ASP 110
0.0431
ASP 111
0.0297
LYS 112
0.0158
LEU 113
0.0161
LEU 113
0.0161
VAL 114
0.0237
VAL 115
0.0237
GLU 116
0.0177
GLU 116
0.0176
CYS 117
0.0150
VAL 118
0.0179
MET 119
0.0233
MET 119
0.0252
LYS 120
0.0417
LYS 120
0.0427
GLY 121
0.0266
GLY 121
0.0266
VAL 122
0.0070
THR 123
0.0158
SER 124
0.0204
THR 125
0.0380
ARG 126
0.0284
VAL 127
0.0248
TYR 128
0.0151
GLU 129
0.0111
GLU 129
0.0110
ARG 130
0.0200
ALA 131
0.0273
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.