CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***

<R2> analysis for 2602031635461411591

---  normal mode 43  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0673
GLN -70.0075
GLN -60.0363
MET -50.0539
GLY -40.0165
ARG -30.0156
GLY -20.0263
SER -10.0193
MET 00.0112
MET 00.0113
CYS 10.0102
CYS 10.0103
ASP 20.0184
ALA 30.0134
PHE 40.0108
VAL 50.0120
GLY 60.0084
THR 70.0079
TRP 80.0055
LYS 90.0100
LEU 100.0144
VAL 110.0184
SER 120.0220
SER 130.0267
GLU 140.0328
GLU 140.0329
ASN 150.0094
ASN 150.0093
PHE 160.0074
ASP 170.0110
ASP 180.0148
TYR 190.0076
MET 200.0140
LYS 210.0102
GLU 220.0109
VAL 230.0065
GLY 240.0121
VAL 250.0298
GLY 260.0441
PHE 270.0673
ALA 280.0467
THR 290.0199
ARG 300.0169
LYS 310.0287
VAL 320.0153
VAL 320.0155
ALA 330.0234
GLY 340.0353
MET 350.0534
ALA 360.0132
LYS 370.0052
PRO 380.0086
ASN 390.0105
MET 400.0101
ILE 410.0093
ILE 420.0073
SER 430.0172
VAL 440.0187
ASN 450.0441
GLY 460.0516
ASP 470.0288
VAL 480.0175
ILE 490.0083
THR 500.0118
ILE 510.0147
LYS 520.0145
SER 530.0196
GLU 540.0130
SER 550.0155
SER 550.0165
THR 560.0200
THR 560.0199
PHE 570.0233
PHE 570.0229
LYS 580.0209
LYS 580.0211
ASN 590.0217
THR 600.0396
GLU 610.0254
ILE 620.0278
SER 630.0232
PHE 640.0246
ILE 650.0262
LEU 660.0154
GLY 670.0422
GLN 680.0446
GLU 690.0194
PHE 700.0235
ASP 710.0278
GLU 720.0271
VAL 730.0212
VAL 730.0226
THR 740.0181
ALA 750.0232
ASP 760.0338
ASP 770.0248
ARG 780.0144
LYS 790.0262
VAL 800.0194
LYS 810.0167
SER 820.0153
THR 830.0124
ILE 840.0115
THR 850.0143
LEU 860.0089
LEU 860.0092
ASP 870.0085
ASP 870.0086
GLY 880.0088
GLY 880.0085
GLY 890.0101
GLY 890.0095
VAL 900.0066
LEU 910.0077
VAL 920.0103
HIS 930.0163
VAL 940.0172
GLN 950.0157
LYS 960.0140
TRP 970.0125
ASP 980.0433
ASP 980.0422
GLY 990.0532
LYS 1000.0200
SER 1010.0138
THR 1020.0103
THR 1030.0126
ILE 1040.0101
LYS 1050.0078
ARG 1060.0059
LYS 1070.0080
ARG 1080.0138
GLU 1090.0267
ASP 1100.0319
ASP 1110.0271
LYS 1120.0100
LEU 1130.0077
LEU 1130.0077
VAL 1140.0140
VAL 1150.0106
GLU 1160.0087
GLU 1160.0086
CYS 1170.0075
VAL 1180.0103
MET 1190.0098
MET 1190.0123
LYS 1200.0330
LYS 1200.0343
GLY 1210.0292
GLY 1210.0289
VAL 1220.0039
THR 1230.0030
SER 1240.0047
THR 1250.0041
ARG 1260.0175
VAL 1270.0170
TYR 1280.0134
GLU 1290.0151
GLU 1290.0147
ARG 1300.0136
ALA 1310.0152

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.