CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***

<R2> analysis for 2602031635461411591

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2285
GLN -70.0031
GLN -60.0150
MET -50.0153
GLY -40.0148
ARG -30.0285
GLY -20.0440
SER -10.0170
MET 00.0148
MET 00.0149
CYS 10.0094
CYS 10.0093
ASP 20.0080
ALA 30.0096
PHE 40.0071
VAL 50.0080
GLY 60.0063
THR 70.0045
TRP 80.0029
LYS 90.0034
LEU 100.0043
VAL 110.0050
SER 120.0100
SER 130.0129
GLU 140.0145
GLU 140.0152
ASN 150.0192
ASN 150.0191
PHE 160.0105
ASP 170.0198
ASP 180.0241
TYR 190.0168
MET 200.0125
LYS 210.0278
GLU 220.0181
VAL 230.0175
GLY 240.0303
VAL 250.0176
GLY 260.0227
PHE 270.0232
ALA 280.0271
THR 290.0048
ARG 300.0084
LYS 310.0089
VAL 320.0068
VAL 320.0067
ALA 330.0082
GLY 340.0066
MET 350.0053
ALA 360.0053
LYS 370.0064
PRO 380.0054
ASN 390.0045
MET 400.0068
ILE 410.0153
ILE 420.0057
SER 430.0094
VAL 440.0178
ASN 450.0200
GLY 460.0654
ASP 470.0521
VAL 480.0318
ILE 490.0119
THR 500.0186
ILE 510.0188
LYS 520.0296
SER 530.0235
GLU 540.0131
SER 550.0099
SER 550.0117
THR 560.0203
THR 560.0225
PHE 570.0185
PHE 570.0201
LYS 580.0179
LYS 580.0176
ASN 590.0122
THR 600.0298
GLU 610.0353
ILE 620.0222
SER 630.0236
PHE 640.0194
ILE 650.0198
LEU 660.0208
GLY 670.0258
GLN 680.0279
GLU 690.0301
PHE 700.0258
ASP 710.0352
GLU 720.0083
VAL 730.0090
VAL 730.0094
THR 740.0196
ALA 750.0290
ASP 760.0361
ASP 770.0438
ARG 780.0225
LYS 790.0140
VAL 800.0161
LYS 810.0188
SER 820.0134
THR 830.0108
ILE 840.0090
THR 850.0059
LEU 860.0048
LEU 860.0046
ASP 870.0089
ASP 870.0108
GLY 880.0102
GLY 880.0111
GLY 890.0117
GLY 890.0109
VAL 900.0117
LEU 910.0073
VAL 920.0076
HIS 930.0074
VAL 940.0190
GLN 950.0237
LYS 960.0287
TRP 970.0299
ASP 980.0689
ASP 980.0620
GLY 990.2285
LYS 1000.0724
SER 1010.0084
THR 1020.0111
THR 1030.0101
ILE 1040.0102
LYS 1050.0067
ARG 1060.0053
LYS 1070.0110
ARG 1080.0117
GLU 1090.0131
ASP 1100.0174
ASP 1110.0226
LYS 1120.0041
LEU 1130.0038
LEU 1130.0038
VAL 1140.0028
VAL 1150.0017
GLU 1160.0044
GLU 1160.0045
CYS 1170.0104
VAL 1180.0113
MET 1190.0147
MET 1190.0139
LYS 1200.0302
LYS 1200.0283
GLY 1210.0357
GLY 1210.0370
VAL 1220.0192
THR 1230.0129
SER 1240.0102
THR 1250.0057
ARG 1260.0035
VAL 1270.0036
TYR 1280.0032
GLU 1290.0037
GLU 1290.0037
ARG 1300.0055
ALA 1310.0056

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.