Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0919
GLN -7
0.0051
GLN -6
0.0367
MET -5
0.0391
GLY -4
0.0849
ARG -3
0.0482
GLY -2
0.0173
SER -1
0.0130
MET 0
0.0140
MET 0
0.0137
CYS 1
0.0150
CYS 1
0.0151
ASP 2
0.0244
ALA 3
0.0281
PHE 4
0.0263
VAL 5
0.0175
GLY 6
0.0173
THR 7
0.0296
TRP 8
0.0198
LYS 9
0.0240
LEU 10
0.0168
VAL 11
0.0250
SER 12
0.0133
SER 13
0.0101
GLU 14
0.0066
GLU 14
0.0066
ASN 15
0.0104
ASN 15
0.0104
PHE 16
0.0122
ASP 17
0.0143
ASP 18
0.0166
TYR 19
0.0189
MET 20
0.0111
LYS 21
0.0096
GLU 22
0.0137
VAL 23
0.0090
GLY 24
0.0109
VAL 25
0.0052
GLY 26
0.0211
PHE 27
0.0272
ALA 28
0.0235
THR 29
0.0083
ARG 30
0.0046
LYS 31
0.0060
VAL 32
0.0091
VAL 32
0.0088
ALA 33
0.0129
GLY 34
0.0132
MET 35
0.0060
ALA 36
0.0194
LYS 37
0.0135
PRO 38
0.0043
ASN 39
0.0105
MET 40
0.0092
ILE 41
0.0216
ILE 42
0.0172
SER 43
0.0220
VAL 44
0.0179
ASN 45
0.0207
GLY 46
0.0403
ASP 47
0.0219
VAL 48
0.0124
ILE 49
0.0139
THR 50
0.0221
ILE 51
0.0230
LYS 52
0.0304
SER 53
0.0251
GLU 54
0.0157
SER 55
0.0197
SER 55
0.0185
THR 56
0.0234
THR 56
0.0270
PHE 57
0.0269
PHE 57
0.0277
LYS 58
0.0359
LYS 58
0.0365
ASN 59
0.0280
THR 60
0.0231
GLU 61
0.0270
ILE 62
0.0141
SER 63
0.0096
PHE 64
0.0100
ILE 65
0.0097
LEU 66
0.0068
GLY 67
0.0101
GLN 68
0.0241
GLU 69
0.0384
PHE 70
0.0223
ASP 71
0.0193
GLU 72
0.0115
VAL 73
0.0188
VAL 73
0.0195
THR 74
0.0123
ALA 75
0.0247
ASP 76
0.0077
ASP 77
0.0148
ARG 78
0.0178
LYS 79
0.0219
VAL 80
0.0131
LYS 81
0.0205
SER 82
0.0260
THR 83
0.0236
ILE 84
0.0157
THR 85
0.0179
LEU 86
0.0268
LEU 86
0.0282
ASP 87
0.0344
ASP 87
0.0374
GLY 88
0.0318
GLY 88
0.0337
GLY 89
0.0226
GLY 89
0.0223
VAL 90
0.0322
LEU 91
0.0278
VAL 92
0.0267
HIS 93
0.0075
VAL 94
0.0157
GLN 95
0.0187
LYS 96
0.0179
TRP 97
0.0185
ASP 98
0.0379
ASP 98
0.0354
GLY 99
0.0919
LYS 100
0.0219
SER 101
0.0157
THR 102
0.0174
THR 103
0.0077
ILE 104
0.0084
LYS 105
0.0158
ARG 106
0.0164
LYS 107
0.0148
ARG 108
0.0135
GLU 109
0.0103
ASP 110
0.0472
ASP 111
0.0530
LYS 112
0.0168
LEU 113
0.0144
LEU 113
0.0144
VAL 114
0.0078
VAL 115
0.0059
GLU 116
0.0066
GLU 116
0.0067
CYS 117
0.0175
VAL 118
0.0214
MET 119
0.0199
MET 119
0.0202
LYS 120
0.0199
LYS 120
0.0198
GLY 121
0.0378
GLY 121
0.0386
VAL 122
0.0247
THR 123
0.0193
SER 124
0.0133
THR 125
0.0042
ARG 126
0.0043
VAL 127
0.0127
TYR 128
0.0162
GLU 129
0.0212
GLU 129
0.0205
ARG 130
0.0278
ALA 131
0.0537
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.