Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0723
GLN -7
0.0011
GLN -6
0.0015
MET -5
0.0017
GLY -4
0.0044
ARG -3
0.0016
GLY -2
0.0104
SER -1
0.0077
MET 0
0.0171
MET 0
0.0171
CYS 1
0.0065
CYS 1
0.0068
ASP 2
0.0177
ALA 3
0.0177
PHE 4
0.0068
VAL 5
0.0107
GLY 6
0.0114
THR 7
0.0288
TRP 8
0.0249
LYS 9
0.0273
LEU 10
0.0128
VAL 11
0.0158
SER 12
0.0366
SER 13
0.0353
GLU 14
0.0188
GLU 14
0.0198
ASN 15
0.0085
ASN 15
0.0085
PHE 16
0.0178
ASP 17
0.0350
ASP 18
0.0310
TYR 19
0.0281
MET 20
0.0254
LYS 21
0.0254
GLU 22
0.0232
VAL 23
0.0092
GLY 24
0.0077
VAL 25
0.0090
GLY 26
0.0144
PHE 27
0.0256
ALA 28
0.0154
THR 29
0.0219
ARG 30
0.0209
LYS 31
0.0321
VAL 32
0.0320
VAL 32
0.0325
ALA 33
0.0115
GLY 34
0.0188
MET 35
0.0345
ALA 36
0.0338
LYS 37
0.0440
PRO 38
0.0375
ASN 39
0.0238
MET 40
0.0179
ILE 41
0.0126
ILE 42
0.0109
SER 43
0.0187
VAL 44
0.0191
ASN 45
0.0151
GLY 46
0.0087
ASP 47
0.0145
VAL 48
0.0138
ILE 49
0.0165
THR 50
0.0225
ILE 51
0.0177
LYS 52
0.0295
SER 53
0.0162
GLU 54
0.0149
SER 55
0.0333
SER 55
0.0381
THR 56
0.0409
THR 56
0.0432
PHE 57
0.0182
PHE 57
0.0196
LYS 58
0.0225
LYS 58
0.0226
ASN 59
0.0205
THR 60
0.0391
GLU 61
0.0423
ILE 62
0.0166
SER 63
0.0129
PHE 64
0.0220
ILE 65
0.0290
LEU 66
0.0281
GLY 67
0.0292
GLN 68
0.0323
GLU 69
0.0245
PHE 70
0.0197
ASP 71
0.0140
GLU 72
0.0116
VAL 73
0.0129
VAL 73
0.0106
THR 74
0.0220
ALA 75
0.0369
ASP 76
0.0348
ASP 77
0.0310
ARG 78
0.0088
LYS 79
0.0164
VAL 80
0.0135
LYS 81
0.0098
SER 82
0.0149
THR 83
0.0180
ILE 84
0.0220
THR 85
0.0118
LEU 86
0.0028
LEU 86
0.0049
ASP 87
0.0176
ASP 87
0.0211
GLY 88
0.0208
GLY 88
0.0230
GLY 89
0.0110
GLY 89
0.0104
VAL 90
0.0145
LEU 91
0.0098
VAL 92
0.0159
HIS 93
0.0093
VAL 94
0.0159
GLN 95
0.0205
LYS 96
0.0252
TRP 97
0.0313
ASP 98
0.0373
ASP 98
0.0373
GLY 99
0.0480
LYS 100
0.0339
SER 101
0.0266
THR 102
0.0154
THR 103
0.0090
ILE 104
0.0080
LYS 105
0.0078
ARG 106
0.0038
LYS 107
0.0106
ARG 108
0.0213
GLU 109
0.0472
ASP 110
0.0723
ASP 111
0.0475
LYS 112
0.0155
LEU 113
0.0149
LEU 113
0.0150
VAL 114
0.0173
VAL 115
0.0092
GLU 116
0.0081
GLU 116
0.0081
CYS 117
0.0139
VAL 118
0.0193
MET 119
0.0227
MET 119
0.0226
LYS 120
0.0246
LYS 120
0.0226
GLY 121
0.0475
GLY 121
0.0483
VAL 122
0.0269
THR 123
0.0168
SER 124
0.0107
THR 125
0.0236
ARG 126
0.0307
VAL 127
0.0200
TYR 128
0.0113
GLU 129
0.0313
GLU 129
0.0302
ARG 130
0.0375
ALA 131
0.0632
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.